RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 TNNT2P45379 298 aaPredicted RBP20.64■□□□□ 0.89
HDAC6-224ENST00000481929 MKRN1Q9UHC7 482 aaKnown RBP20.64■□□□□ 0.89
HDAC6-224ENST00000481929 POTECB2RU33 542 aa20.63■□□□□ 0.89
HDAC6-224ENST00000481929 NFKBIEO00221 500 aa20.63■□□□□ 0.89
HDAC6-224ENST00000481929 NFIXQ14938 502 aa20.63■□□□□ 0.89
HDAC6-224ENST00000481929 DLEC1Q9Y238 1755 aa20.63■□□□□ 0.89
HDAC6-224ENST00000481929 AFDNP55196 1824 aaKnown RBP20.62■□□□□ 0.89
HDAC6-224ENST00000481929 SOS1Q07889 1333 aaPredicted RBP20.62■□□□□ 0.89
HDAC6-224ENST00000481929 NRXN2Q9P2S2 1712 aa20.61■□□□□ 0.89
HDAC6-224ENST00000481929 CCDC88AQ3V6T2 1871 aa20.61■□□□□ 0.89
HDAC6-224ENST00000481929 C2CD5Q86YS7 1000 aa20.61■□□□□ 0.89
HDAC6-224ENST00000481929 H0YIN7 160 aa20.6■□□□□ 0.89
HDAC6-224ENST00000481929 FOXN1O15353 648 aa20.6■□□□□ 0.89
HDAC6-224ENST00000481929 SERPINB2P05120 415 aa20.6■□□□□ 0.89
HDAC6-224ENST00000481929 CHADLQ6NUI6 762 aa20.6■□□□□ 0.89
HDAC6-224ENST00000481929 DNAJC10Q8IXB1 793 aa20.6■□□□□ 0.89
HDAC6-224ENST00000481929 PRDM10Q9NQV6 1147 aa20.6■□□□□ 0.89
HDAC6-224ENST00000481929 NARFQ9UHQ1 456 aa20.6■□□□□ 0.89
HDAC6-224ENST00000481929 SLC34A2O95436 690 aa20.59■□□□□ 0.89
HDAC6-224ENST00000481929 COL15A1P39059 1388 aa20.59■□□□□ 0.89
HDAC6-224ENST00000481929 ERFEQ4G0M1 354 aa20.57■□□□□ 0.88
HDAC6-224ENST00000481929 AIDAQ96BJ3 306 aa20.57■□□□□ 0.88
HDAC6-224ENST00000481929 CNTNAP1P78357 1384 aa20.57■□□□□ 0.88
HDAC6-224ENST00000481929 CYP19A1P11511 503 aaPredicted RBP20.56■□□□□ 0.88
HDAC6-224ENST00000481929 AEBP1Q8IUX7 1158 aa20.56■□□□□ 0.88
HDAC6-224ENST00000481929 CARMIL3Q8ND23 1372 aa20.56■□□□□ 0.88
HDAC6-224ENST00000481929 CTCFP49711 727 aaPredicted RBP20.55■□□□□ 0.88
HDAC6-224ENST00000481929 BCL2L12Q9HB09 334 aa20.55■□□□□ 0.88
HDAC6-224ENST00000481929 ZBTB1Q9Y2K1 713 aa20.54■□□□□ 0.88
HDAC6-224ENST00000481929 SCN11AQ9UI33 1791 aa20.54■□□□□ 0.88
HDAC6-224ENST00000481929 POTEIP0CG38 1075 aa20.53■□□□□ 0.88
HDAC6-224ENST00000481929 POTEJP0CG39 1038 aa20.53■□□□□ 0.88
HDAC6-224ENST00000481929 ZNF622Q969S3 477 aaKnown RBP eCLIP20.53■□□□□ 0.882e-7■□□□□ 9.6
HDAC6-224ENST00000481929 ZNF219Q9P2Y4 722 aaPredicted RBP20.53■□□□□ 0.88
HDAC6-224ENST00000481929 DICER1Q9UPY3 1922 aaKnown RBP20.53■□□□□ 0.88
HDAC6-224ENST00000481929 C21orf2O43822 256 aa20.52■□□□□ 0.88
HDAC6-224ENST00000481929 SLC52A2Q9HAB3 445 aa20.52■□□□□ 0.88
HDAC6-224ENST00000481929 PDZRN3Q9UPQ7 1066 aa20.52■□□□□ 0.88
HDAC6-224ENST00000481929 SULT6B1Q6IMI4 303 aa20.51■□□□□ 0.87
HDAC6-224ENST00000481929 BICDL1Q6ZP65 573 aa20.51■□□□□ 0.87
HDAC6-224ENST00000481929 LTBP3Q9NS15 1303 aa20.51■□□□□ 0.87
HDAC6-224ENST00000481929 FER1L6Q2WGJ9 1857 aa20.5■□□□□ 0.87
HDAC6-224ENST00000481929 DDNO94850 711 aaPredicted RBP20.5■□□□□ 0.87
HDAC6-224ENST00000481929 PDE6BP35913 854 aa20.5■□□□□ 0.87
HDAC6-224ENST00000481929 AKAP4Q5JQC9 854 aa20.5■□□□□ 0.87
HDAC6-224ENST00000481929 TAOK3Q9H2K8 898 aa20.5■□□□□ 0.87
HDAC6-224ENST00000481929 PASKQ96RG2 1323 aa20.5■□□□□ 0.87
HDAC6-224ENST00000481929 IQCA1LA6NCM1 817 aa20.49■□□□□ 0.87
HDAC6-224ENST00000481929 VEGFBP49765 207 aa20.49■□□□□ 0.87
HDAC6-224ENST00000481929 SLC39A6Q13433 755 aa20.49■□□□□ 0.87
HDAC6-224ENST00000481929 LDHDQ86WU2 507 aa20.49■□□□□ 0.87
HDAC6-224ENST00000481929 POLR3GLQ9BT43 218 aa20.49■□□□□ 0.87
HDAC6-224ENST00000481929 BRIP1Q9BX63 1249 aa20.48■□□□□ 0.87
HDAC6-224ENST00000481929 MRC1P22897 1456 aa20.48■□□□□ 0.87
HDAC6-224ENST00000481929 TMEM88BA6NKF7 163 aa20.47■□□□□ 0.87
HDAC6-224ENST00000481929 CANXP27824 592 aaKnown RBP20.47■□□□□ 0.87
HDAC6-224ENST00000481929 LBX1P52954 281 aa20.47■□□□□ 0.87
HDAC6-224ENST00000481929 ANKRD31Q8N7Z5 1873 aa20.47■□□□□ 0.87
HDAC6-224ENST00000481929 A0A087WZG4 1122 aa20.46■□□□□ 0.87
HDAC6-224ENST00000481929 FAM161AQ3B820 660 aa20.46■□□□□ 0.87
HDAC6-224ENST00000481929 VSIG10Q8N0Z9 540 aa20.46■□□□□ 0.87
HDAC6-224ENST00000481929 LGR6Q9HBX8 967 aa20.46■□□□□ 0.87
HDAC6-224ENST00000481929 WBP1LQ9NX94 342 aa20.46■□□□□ 0.87
HDAC6-224ENST00000481929 COL11A2P13942 1736 aaPredicted RBP20.45■□□□□ 0.86
HDAC6-224ENST00000481929 TBC1D9BQ66K14 1250 aa20.45■□□□□ 0.86
HDAC6-224ENST00000481929 ABHD8Q96I13 439 aa20.45■□□□□ 0.86
HDAC6-224ENST00000481929 RNMTO43148 476 aaKnown RBP20.44■□□□□ 0.86
HDAC6-224ENST00000481929 SOGA3Q5TF21 947 aa20.44■□□□□ 0.86
HDAC6-224ENST00000481929 PRR5LQ6MZQ0 368 aa20.44■□□□□ 0.86
HDAC6-224ENST00000481929 CNKSR1Q969H4 720 aa20.44■□□□□ 0.86
HDAC6-224ENST00000481929 L3MBTL3Q96JM7 780 aaPredicted RBP20.44■□□□□ 0.86
HDAC6-224ENST00000481929 TAF1DQ9H5J8 278 aaPredicted RBP20.44■□□□□ 0.86
HDAC6-224ENST00000481929 EIF5P55010 431 aaKnown RBP20.43■□□□□ 0.86
HDAC6-224ENST00000481929 CCDC24Q8N4L8 307 aa20.43■□□□□ 0.86
HDAC6-224ENST00000481929 SCN4AP35499 1836 aa20.43■□□□□ 0.86
HDAC6-224ENST00000481929 VIRMAQ69YN4 1812 aaKnown RBP20.42■□□□□ 0.86
HDAC6-224ENST00000481929 STARD3NLO95772 234 aa20.42■□□□□ 0.86
HDAC6-224ENST00000481929 EAPPQ56P03 285 aaPredicted RBP20.42■□□□□ 0.86
HDAC6-224ENST00000481929 MORC1Q86VD1 984 aa20.42■□□□□ 0.86
HDAC6-224ENST00000481929 NPHP1O15259 732 aa20.41■□□□□ 0.86
HDAC6-224ENST00000481929 ITGBL1O95965 494 aaPredicted RBP20.41■□□□□ 0.86
HDAC6-224ENST00000481929 HSPA8P11142 646 aaKnown RBP20.41■□□□□ 0.86
HDAC6-224ENST00000481929 STYK1Q6J9G0 422 aa20.41■□□□□ 0.86
HDAC6-224ENST00000481929 PRPF40BQ6NWY9 871 aaKnown RBP20.41■□□□□ 0.86
HDAC6-224ENST00000481929 SCN7AQ01118 1682 aa20.41■□□□□ 0.86
HDAC6-224ENST00000481929 IL13P35225 146 aa20.4■□□□□ 0.86
HDAC6-224ENST00000481929 CNBD1Q8NA66 436 aa20.4■□□□□ 0.86
HDAC6-224ENST00000481929 CLEC11AQ9Y240 323 aa20.4■□□□□ 0.86
HDAC6-224ENST00000481929 SLX4Q8IY92 1834 aa20.39■□□□□ 0.86
HDAC6-224ENST00000481929 MAP2K1Q02750 393 aaPredicted RBP20.39■□□□□ 0.85
HDAC6-224ENST00000481929 TTC5Q8N0Z6 440 aa20.39■□□□□ 0.85
HDAC6-224ENST00000481929 ZNF330Q9Y3S2 320 aaPredicted RBP20.39■□□□□ 0.85
HDAC6-224ENST00000481929 RASSF10A6NK89 507 aa20.38■□□□□ 0.85
HDAC6-224ENST00000481929 ST5P78524 1137 aa20.38■□□□□ 0.85
HDAC6-224ENST00000481929 DEFB115Q30KQ5 88 aa20.38■□□□□ 0.85
HDAC6-224ENST00000481929 PANK3Q9H999 370 aa20.38■□□□□ 0.85
HDAC6-224ENST00000481929 HACL1Q9UJ83 578 aa20.38■□□□□ 0.85
HDAC6-224ENST00000481929 UBR2Q8IWV8 1755 aa20.38■□□□□ 0.85
HDAC6-224ENST00000481929 CACNA1SQ13698 1873 aa20.37■□□□□ 0.85
HDAC6-224ENST00000481929 SRGNP10124 158 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms