RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 CHMP4BQ9H444 224 aaKnown RBP3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 ZBED9Q6R2W3 1325 aa3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 MS4A1P11836 297 aa3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 MMP14P50281 582 aa3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 ALDH1L2Q3SY69 923 aa3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 NBPF14Q5TI25 921 aa3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 ZNF530Q6P9A1 599 aaPredicted RBP3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 RTF1Q92541 710 aaKnown RBP3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 RBM33Q96EV2 1170 aaKnown RBP3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 CFAP44Q96MT7 982 aa3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 MYH3P11055 1940 aa3.55□□□□□ -1.84
RAB3IP-206ENST00000481897 C10orf71Q711Q0 1435 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 RTL9Q8NET4 1388 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 PALLDQ8WX93 1383 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 NUTM2BA6NNL0 878 aaPredicted RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 NUTM2EB1AL46 878 aaPredicted RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 ERVV-1B6SEH8 477 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 E9PSI1 815 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 ADAMTS2O95450 1211 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 TAF7Q15545 349 aaPredicted RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 HSP90AB3PQ58FF7 597 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 CLEC4GQ6UXB4 293 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 NUTM2AQ8IVF1 878 aaPredicted RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 CDAN1Q8IWY9 1227 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 TRMT2AQ8IZ69 625 aaKnown RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 MPNDQ8N594 471 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 MARCH10Q8NA82 808 aaPredicted RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 DDX17Q92841 729 aaKnown RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 CAMKK2Q96RR4 588 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 TMOD3Q9NYL9 352 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 ZC3H4Q9UPT8 1303 aaKnown RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 NUTM2FA1L443 756 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 CHL1O00533 1208 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 POTEIP0CG38 1075 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 IL6STP40189 918 aaPredicted RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 TMPOP42166 694 aaKnown RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 XPCQ01831 940 aaPredicted RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 RRS1Q15050 365 aaKnown RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 SULT6B1Q6IMI4 303 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 TMED8Q6PL24 325 aaPredicted RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 UPF1Q92900 1129 aaKnown RBP eCLIP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 FMNL2Q96PY5 1086 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 TMEM121BQ9BXQ6 578 aaPredicted RBP3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 ARAP2Q8WZ64 1704 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 NUP98P52948 1817 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 SPDYE4A6NLX3 237 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 CYP27B1O15528 508 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 TMC4Q7Z404 712 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 ARHGAP45Q92619 1136 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 VPS33BQ9H267 617 aa3.54□□□□□ -1.84
RAB3IP-206ENST00000481897 PTPRCP08575 1304 aa3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 ATMINO43313 823 aaPredicted RBP3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 PRKAR2BP31323 418 aa3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 TEFQ10587 303 aa3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 MMRN1Q13201 1228 aa3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 TICAM2Q86XR7 235 aa3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 CABLES1Q8TDN4 633 aa3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 PSME4Q14997 1843 aa3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 STARD3NLO95772 234 aa3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 SNRPA1P09661 255 aaKnown RBP3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 U2AF1L5P0DN76 240 aaPredicted RBP3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 U2AF1Q01081 240 aaKnown RBP eCLIP3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 DDX10Q13206 875 aaKnown RBP3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 TRIM28Q13263 835 aaKnown RBP3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 CHRNA2Q15822 529 aa3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 FAM98CQ17RN3 349 aaKnown RBP3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 CC2D1BQ5T0F9 858 aaKnown RBP3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 WWC1Q8IX03 1113 aa3.53□□□□□ -1.84
RAB3IP-206ENST00000481897 AFDNP55196 1824 aaKnown RBP3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 A0A1B0GUL6 1792 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 RPS6KA4O75676 772 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 CABP4P57796 275 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 STRN4Q9NRL3 753 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 STK32BQ9NY57 414 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 ZNF652Q9Y2D9 606 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 DICER1Q9UPY3 1922 aaKnown RBP3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 KIF16BQ96L93 1317 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 CHRM1P11229 460 aaPredicted RBP3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 PTGER2P43116 358 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 MTHFSDQ2M296 383 aaKnown RBP3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 PARP10Q53GL7 1025 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 TTC5Q8N0Z6 440 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 HYPKQ9NX55 129 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 RGS20O76081 388 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 ZNF790Q6PG37 636 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 MRS2Q9HD23 443 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 FBXO3Q9UK99 471 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 TAOK2Q9UL54 1235 aa3.52□□□□□ -1.85
RAB3IP-206ENST00000481897 TNRC6CQ9HCJ0 1690 aaKnown RBP3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 CDHR2Q9BYE9 1310 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 LTBP1Q14766 1721 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 SOGA3Q5TF21 947 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 NYXQ9GZU5 481 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 CCDC9Q9Y3X0 531 aaKnown RBP3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 MYH14Q7Z406 1995 aaKnown RBP3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 SPEF2Q9C093 1822 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 CARMIL3Q8ND23 1372 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 LAMB1P07942 1786 aa3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 DDX58O95786 925 aaKnown RBP3.51□□□□□ -1.85
RAB3IP-206ENST00000481897 EIF4A1P60842 406 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms