RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 ATP10DQ9P241 1426 aa19.7■□□□□ 0.74
RXRA-202ENST00000481739 FAM98CQ17RN3 349 aaKnown RBP19.7■□□□□ 0.74
RXRA-202ENST00000481739 HDGFL1Q5TGJ6 251 aa19.7■□□□□ 0.74
RXRA-202ENST00000481739 TTC5Q8N0Z6 440 aa19.7■□□□□ 0.74
RXRA-202ENST00000481739 MRC1P22897 1456 aa19.7■□□□□ 0.74
RXRA-202ENST00000481739 ZNF790Q6PG37 636 aa19.69■□□□□ 0.74
RXRA-202ENST00000481739 SIRT2Q8IXJ6 389 aa19.69■□□□□ 0.74
RXRA-202ENST00000481739 C1orf115Q9H7X2 142 aa19.69■□□□□ 0.74
RXRA-202ENST00000481739 TNS2Q63HR2 1409 aa19.69■□□□□ 0.74
RXRA-202ENST00000481739 A0A0G2JS52 829 aa19.69■□□□□ 0.74
RXRA-202ENST00000481739 MYT1Q01538 1121 aa19.69■□□□□ 0.74
RXRA-202ENST00000481739 DCTPP1Q9H773 170 aa19.69■□□□□ 0.74
RXRA-202ENST00000481739 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.68■□□□□ 0.74
RXRA-202ENST00000481739 KAT6BQ8WYB5 2073 aa19.68■□□□□ 0.74
RXRA-202ENST00000481739 HMMRO75330 724 aa19.68■□□□□ 0.74
RXRA-202ENST00000481739 EIF2S2P20042 333 aaKnown RBP19.68■□□□□ 0.74
RXRA-202ENST00000481739 FKBP5Q13451 457 aaPredicted RBP19.68■□□□□ 0.74
RXRA-202ENST00000481739 G2E3Q7L622 706 aa19.68■□□□□ 0.74
RXRA-202ENST00000481739 N4BP2Q86UW6 1770 aaPredicted RBP19.68■□□□□ 0.74
RXRA-202ENST00000481739 GNAI3P08754 354 aa19.67■□□□□ 0.74
RXRA-202ENST00000481739 CEP85Q6P2H3 762 aa19.67■□□□□ 0.74
RXRA-202ENST00000481739 TMOD3Q9NYL9 352 aa19.67■□□□□ 0.74
RXRA-202ENST00000481739 ANKRD45Q5TZF3 282 aa19.66■□□□□ 0.74
RXRA-202ENST00000481739 LNPKQ9C0E8 428 aa19.66■□□□□ 0.74
RXRA-202ENST00000481739 BMP2KLQ5H9B9 411 aa19.65■□□□□ 0.74
RXRA-202ENST00000481739 MEIS3Q99687 375 aa19.65■□□□□ 0.74
RXRA-202ENST00000481739 HEG1Q9ULI3 1381 aa19.65■□□□□ 0.74
RXRA-202ENST00000481739 TOGARAM1Q9Y4F4 1720 aa19.65■□□□□ 0.74
RXRA-202ENST00000481739 GIGYF1O75420 1035 aaPredicted RBP19.65■□□□□ 0.74
RXRA-202ENST00000481739 EIF5BO60841 1220 aaKnown RBP19.64■□□□□ 0.73
RXRA-202ENST00000481739 SLC4A10Q6U841 1118 aa19.64■□□□□ 0.73
RXRA-202ENST00000481739 GNAI2P04899 355 aa19.63■□□□□ 0.73
RXRA-202ENST00000481739 SYTL4Q96C24 671 aaPredicted RBP19.63■□□□□ 0.73
RXRA-202ENST00000481739 ZNF496Q96IT1 587 aaPredicted RBP19.63■□□□□ 0.73
RXRA-202ENST00000481739 FMNL2Q96PY5 1086 aa19.63■□□□□ 0.73
RXRA-202ENST00000481739 F6X3S4 739 aa19.62■□□□□ 0.73
RXRA-202ENST00000481739 TRPC5Q9UL62 973 aaPredicted RBP19.62■□□□□ 0.73
RXRA-202ENST00000481739 PRAMEF22A3QJZ6 481 aa19.62■□□□□ 0.73
RXRA-202ENST00000481739 MARCH10Q8NA82 808 aaPredicted RBP19.62■□□□□ 0.73
RXRA-202ENST00000481739 GJD4Q96KN9 370 aaPredicted RBP19.62■□□□□ 0.73
RXRA-202ENST00000481739 DAXXQ9UER7 740 aaPredicted RBP19.62■□□□□ 0.73
RXRA-202ENST00000481739 ITGB4P16144 1822 aa19.61■□□□□ 0.73
RXRA-202ENST00000481739 DBF4Q9UBU7 674 aaPredicted RBP19.61■□□□□ 0.73
RXRA-202ENST00000481739 PIGBQ92521 554 aa19.6■□□□□ 0.73
RXRA-202ENST00000481739 SNRPA1P09661 255 aaKnown RBP19.6■□□□□ 0.73
RXRA-202ENST00000481739 TBC1D32Q96NH3 1257 aa19.6■□□□□ 0.73
RXRA-202ENST00000481739 CHPF2Q9P2E5 772 aa19.6■□□□□ 0.73
RXRA-202ENST00000481739 QTRT2Q9H974 415 aaKnown RBP19.59■□□□□ 0.73
RXRA-202ENST00000481739 ATRNO75882 1429 aa19.58■□□□□ 0.73
RXRA-202ENST00000481739 PTCD1O75127 700 aaKnown RBP19.58■□□□□ 0.73
RXRA-202ENST00000481739 PRIM1P49642 420 aaKnown RBP19.58■□□□□ 0.73
RXRA-202ENST00000481739 ACSBG1Q96GR2 724 aa19.58■□□□□ 0.73
RXRA-202ENST00000481739 DOT1LQ8TEK3 1739 aa19.58■□□□□ 0.73
RXRA-202ENST00000481739 C5P01031 1676 aa19.58■□□□□ 0.73
RXRA-202ENST00000481739 GLI3P10071 1580 aa19.58■□□□□ 0.72
RXRA-202ENST00000481739 SEC24BO95487 1268 aa19.57■□□□□ 0.72
RXRA-202ENST00000481739 SRCIN1Q9C0H9 1055 aa19.57■□□□□ 0.72
RXRA-202ENST00000481739 PAPPAQ13219 1627 aa19.56■□□□□ 0.72
RXRA-202ENST00000481739 ANXA1P04083 346 aa19.56■□□□□ 0.72
RXRA-202ENST00000481739 ASAP1Q9ULH1 1129 aa19.56■□□□□ 0.72
RXRA-202ENST00000481739 BECN1Q14457 450 aa19.55■□□□□ 0.72
RXRA-202ENST00000481739 PHAXQ9H814 394 aaKnown RBP19.55■□□□□ 0.72
RXRA-202ENST00000481739 HYPKQ9NX55 129 aa19.55■□□□□ 0.72
RXRA-202ENST00000481739 HDAC5Q9UQL6 1122 aa19.55■□□□□ 0.72
RXRA-202ENST00000481739 BCL9O00512 1426 aa19.55■□□□□ 0.72
RXRA-202ENST00000481739 UBR2Q8IWV8 1755 aa19.55■□□□□ 0.72
RXRA-202ENST00000481739 FBXO41Q8TF61 875 aa19.55■□□□□ 0.72
RXRA-202ENST00000481739 DNAAF4Q8WXU2 420 aa19.55■□□□□ 0.72
RXRA-202ENST00000481739 ATG3Q9NT62 314 aa19.55■□□□□ 0.72
RXRA-202ENST00000481739 USP16Q9Y5T5 823 aa19.55■□□□□ 0.72
RXRA-202ENST00000481739 IBTKQ9P2D0 1353 aaPredicted RBP19.54■□□□□ 0.72
RXRA-202ENST00000481739 UBTFL1P0CB47 393 aaPredicted RBP19.54■□□□□ 0.72
RXRA-202ENST00000481739 RBM42Q9BTD8 480 aaKnown RBP19.54■□□□□ 0.72
RXRA-202ENST00000481739 KCPQ6ZWJ8 1503 aa19.54■□□□□ 0.72
RXRA-202ENST00000481739 THSD7AQ9UPZ6 1657 aa19.54■□□□□ 0.72
RXRA-202ENST00000481739 ATP8B2P98198 1209 aa19.53■□□□□ 0.72
RXRA-202ENST00000481739 PROSER3Q2NL68 480 aa19.53■□□□□ 0.72
RXRA-202ENST00000481739 PLEKHM2Q8IWE5 1019 aa19.53■□□□□ 0.72
RXRA-202ENST00000481739 USP44Q9H0E7 712 aa19.53■□□□□ 0.72
RXRA-202ENST00000481739 MYL6BP14649 208 aa19.52■□□□□ 0.72
RXRA-202ENST00000481739 SEPT12Q8IYM1 358 aa19.52■□□□□ 0.72
RXRA-202ENST00000481739 DDX21Q9NR30 783 aaKnown RBP eCLIP19.52■□□□□ 0.72
RXRA-202ENST00000481739 ALDH1L1O75891 902 aa19.51■□□□□ 0.71
RXRA-202ENST00000481739 DDX58O95786 925 aaKnown RBP19.51■□□□□ 0.71
RXRA-202ENST00000481739 BEND3Q5T5X7 828 aa19.51■□□□□ 0.71
RXRA-202ENST00000481739 LAMB4A4D0S4 1761 aa19.51■□□□□ 0.71
RXRA-202ENST00000481739 PI4KAP2A4QPH2 592 aa19.51■□□□□ 0.71
RXRA-202ENST00000481739 PI4KAP1Q8N8J0 262 aa19.51■□□□□ 0.71
RXRA-202ENST00000481739 ONECUT3O60422 494 aaPredicted RBP19.5■□□□□ 0.71
RXRA-202ENST00000481739 ZNF772Q68DY9 489 aaPredicted RBP19.5■□□□□ 0.71
RXRA-202ENST00000481739 KSR2Q6VAB6 950 aa19.5■□□□□ 0.71
RXRA-202ENST00000481739 C22orf23Q9BZE7 217 aa19.5■□□□□ 0.71
RXRA-202ENST00000481739 ADCY9O60503 1353 aa19.49■□□□□ 0.71
RXRA-202ENST00000481739 AIMP1Q12904 312 aaKnown RBP19.49■□□□□ 0.71
RXRA-202ENST00000481739 FAM182BQ5T319 152 aa19.49■□□□□ 0.71
RXRA-202ENST00000481739 TTC22Q5TAA0 569 aa19.49■□□□□ 0.71
RXRA-202ENST00000481739 KCNQ2O43526 872 aa19.48■□□□□ 0.71
RXRA-202ENST00000481739 CDC45O75419 566 aa19.48■□□□□ 0.71
RXRA-202ENST00000481739 PIP4K2AP48426 406 aaPredicted RBP19.48■□□□□ 0.71
RXRA-202ENST00000481739 MFAP1P55081 439 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms