RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 A0A0G2JLW4 131 aa29.64■■■□□ 2.34
GPCPD1-206ENST00000481690 CANXP27824 592 aaKnown RBP29.64■■■□□ 2.34
GPCPD1-206ENST00000481690 FCHSD2O94868 740 aa29.63■■■□□ 2.33
GPCPD1-206ENST00000481690 DDR1Q08345 913 aa29.63■■■□□ 2.33
GPCPD1-206ENST00000481690 HEG1Q9ULI3 1381 aa29.63■■■□□ 2.33
GPCPD1-206ENST00000481690 STARD3NLO95772 234 aa29.62■■■□□ 2.33
GPCPD1-206ENST00000481690 DPEP1P16444 411 aa29.61■■■□□ 2.33
GPCPD1-206ENST00000481690 RTF1Q92541 710 aaKnown RBP29.61■■■□□ 2.33
GPCPD1-206ENST00000481690 AFDNP55196 1824 aaKnown RBP29.61■■■□□ 2.33
GPCPD1-206ENST00000481690 BTBD11A6QL63 1104 aa29.6■■■□□ 2.33
GPCPD1-206ENST00000481690 NARFQ9UHQ1 456 aa29.6■■■□□ 2.33
GPCPD1-206ENST00000481690 BCS1LQ9Y276 419 aa29.6■■■□□ 2.33
GPCPD1-206ENST00000481690 MCM10Q7L590 875 aa29.59■■■□□ 2.33
GPCPD1-206ENST00000481690 FMNL2Q96PY5 1086 aa29.59■■■□□ 2.33
GPCPD1-206ENST00000481690 ATP10DQ9P241 1426 aa29.59■■■□□ 2.33
GPCPD1-206ENST00000481690 DLG5Q8TDM6 1919 aa29.59■■■□□ 2.33
GPCPD1-206ENST00000481690 POLRMTO00411 1230 aaKnown RBP29.58■■■□□ 2.33
GPCPD1-206ENST00000481690 TEX13AQ9BXU3 409 aaPredicted RBP29.57■■■□□ 2.32
GPCPD1-206ENST00000481690 ZNF330Q9Y3S2 320 aaPredicted RBP29.57■■■□□ 2.32
GPCPD1-206ENST00000481690 KCNQ3O43525 872 aa29.56■■■□□ 2.32
GPCPD1-206ENST00000481690 GIGYF1O75420 1035 aaPredicted RBP29.56■■■□□ 2.32
GPCPD1-206ENST00000481690 TM4SF1P30408 202 aa29.56■■■□□ 2.32
GPCPD1-206ENST00000481690 ARFGEF1Q9Y6D6 1849 aa29.55■■■□□ 2.32
GPCPD1-206ENST00000481690 NEFMP07197 916 aa29.55■■■□□ 2.32
GPCPD1-206ENST00000481690 SCN7AQ01118 1682 aa29.54■■■□□ 2.32
GPCPD1-206ENST00000481690 DCTN1Q14203 1278 aa29.54■■■□□ 2.32
GPCPD1-206ENST00000481690 NFIXQ14938 502 aa29.54■■■□□ 2.32
GPCPD1-206ENST00000481690 ADCY9O60503 1353 aa29.53■■■□□ 2.32
GPCPD1-206ENST00000481690 EIF5P55010 431 aaKnown RBP29.53■■■□□ 2.32
GPCPD1-206ENST00000481690 BCL2L12Q9HB09 334 aa29.53■■■□□ 2.32
GPCPD1-206ENST00000481690 NRXN2Q9P2S2 1712 aa29.53■■■□□ 2.32
GPCPD1-206ENST00000481690 A0A087WZG4 1122 aa29.52■■■□□ 2.32
GPCPD1-206ENST00000481690 C1QTNF8P60827 252 aa29.51■■■□□ 2.31
GPCPD1-206ENST00000481690 ZNF526Q8TF50 670 aaPredicted RBP29.51■■■□□ 2.31
GPCPD1-206ENST00000481690 KCNA3P22001 575 aa29.5■■■□□ 2.31
GPCPD1-206ENST00000481690 PIM2Q9P1W9 311 aa29.5■■■□□ 2.31
GPCPD1-206ENST00000481690 HTATSF1O43719 755 aaKnown RBP29.49■■■□□ 2.31
GPCPD1-206ENST00000481690 A1BGP04217 495 aa29.49■■■□□ 2.31
GPCPD1-206ENST00000481690 CHRNA5P30532 468 aa29.49■■■□□ 2.31
GPCPD1-206ENST00000481690 BICDL1Q6ZP65 573 aa29.49■■■□□ 2.31
GPCPD1-206ENST00000481690 ARHGAP27Q6ZUM4 889 aa29.49■■■□□ 2.31
GPCPD1-206ENST00000481690 NPM2Q86SE8 214 aaKnown RBP29.49■■■□□ 2.31
GPCPD1-206ENST00000481690 GPBP1L1Q9HC44 474 aaPredicted RBP29.48■■■□□ 2.31
GPCPD1-206ENST00000481690 SERPINB2P05120 415 aa29.47■■■□□ 2.31
GPCPD1-206ENST00000481690 IL6STP40189 918 aaPredicted RBP29.47■■■□□ 2.31
GPCPD1-206ENST00000481690 TBC1D2BQ9UPU7 963 aa29.47■■■□□ 2.31
GPCPD1-206ENST00000481690 BCORQ6W2J9 1755 aa29.47■■■□□ 2.31
GPCPD1-206ENST00000481690 DLEC1Q9Y238 1755 aa29.45■■■□□ 2.31
GPCPD1-206ENST00000481690 PRAMEF22A3QJZ6 481 aa29.45■■■□□ 2.31
GPCPD1-206ENST00000481690 DDX10Q13206 875 aaKnown RBP29.45■■■□□ 2.31
GPCPD1-206ENST00000481690 DALRD3Q5D0E6 543 aaKnown RBP29.45■■■□□ 2.31
GPCPD1-206ENST00000481690 USP16Q9Y5T5 823 aa29.45■■■□□ 2.31
GPCPD1-206ENST00000481690 MAPK8IP3Q9UPT6 1336 aa29.44■■■□□ 2.3
GPCPD1-206ENST00000481690 SNRPA1P09661 255 aaKnown RBP29.43■■■□□ 2.3
GPCPD1-206ENST00000481690 PIP4K2AP48426 406 aaPredicted RBP29.43■■■□□ 2.3
GPCPD1-206ENST00000481690 RALBP1Q15311 655 aa29.43■■■□□ 2.3
GPCPD1-206ENST00000481690 TBC1D9BQ66K14 1250 aa29.43■■■□□ 2.3
GPCPD1-206ENST00000481690 PLEKHF1Q96S99 279 aa29.43■■■□□ 2.3
GPCPD1-206ENST00000481690 LAMB4A4D0S4 1761 aa29.42■■■□□ 2.3
GPCPD1-206ENST00000481690 KDM3BQ7LBC6 1761 aa29.42■■■□□ 2.3
GPCPD1-206ENST00000481690 SENP3-EIF4A1A0A087X0R7 540 aa29.42■■■□□ 2.3
GPCPD1-206ENST00000481690 TAF7Q15545 349 aaPredicted RBP29.42■■■□□ 2.3
GPCPD1-206ENST00000481690 PNNQ9H307 717 aaKnown RBP29.41■■■□□ 2.3
GPCPD1-206ENST00000481690 CARMIL3Q8ND23 1372 aa29.4■■■□□ 2.3
GPCPD1-206ENST00000481690 ANKRD31Q8N7Z5 1873 aa29.4■■■□□ 2.3
GPCPD1-206ENST00000481690 NFE2L2Q16236 605 aa29.4■■■□□ 2.3
GPCPD1-206ENST00000481690 MIS18AQ9NYP9 233 aa29.4■■■□□ 2.3
GPCPD1-206ENST00000481690 DZIP3Q86Y13 1208 aaKnown RBP29.39■■■□□ 2.3
GPCPD1-206ENST00000481690 CAMTA2O94983 1202 aa29.38■■■□□ 2.29
GPCPD1-206ENST00000481690 THUMPD2Q9BTF0 503 aaKnown RBP29.37■■■□□ 2.29
GPCPD1-206ENST00000481690 C2CD5Q86YS7 1000 aa29.36■■■□□ 2.29
GPCPD1-206ENST00000481690 PNISRQ8TF01 805 aaKnown RBP29.35■■■□□ 2.29
GPCPD1-206ENST00000481690 SBF1O95248 1867 aa29.35■■■□□ 2.29
GPCPD1-206ENST00000481690 NPHP1O15259 732 aa29.34■■■□□ 2.29
GPCPD1-206ENST00000481690 SETDB2Q96T68 719 aa29.34■■■□□ 2.29
GPCPD1-206ENST00000481690 MYBBP1AQ9BQG0 1328 aaKnown RBP29.34■■■□□ 2.29
GPCPD1-206ENST00000481690 COL11A2P13942 1736 aaPredicted RBP29.34■■■□□ 2.29
GPCPD1-206ENST00000481690 H0YIN7 160 aa29.33■■■□□ 2.29
GPCPD1-206ENST00000481690 C9orf131Q5VYM1 1079 aa29.33■■■□□ 2.29
GPCPD1-206ENST00000481690 CCDC24Q8N4L8 307 aa29.33■■■□□ 2.29
GPCPD1-206ENST00000481690 PRR5LQ6MZQ0 368 aa29.32■■■□□ 2.28
GPCPD1-206ENST00000481690 CACNA1SQ13698 1873 aa29.31■■■□□ 2.28
GPCPD1-206ENST00000481690 NBPF26B4DH59 902 aa29.3■■■□□ 2.28
GPCPD1-206ENST00000481690 NBPF10Q6P3W6 841 aaKnown RBP29.3■■■□□ 2.28
GPCPD1-206ENST00000481690 NBPF15Q8N660 670 aa29.3■■■□□ 2.28
GPCPD1-206ENST00000481690 TTLL6Q8N841 843 aa29.3■■■□□ 2.28
GPCPD1-206ENST00000481690 CNBD1Q8NA66 436 aa29.3■■■□□ 2.28
GPCPD1-206ENST00000481690 RNF181Q9P0P0 153 aa29.29■■■□□ 2.28
GPCPD1-206ENST00000481690 ZNF652Q9Y2D9 606 aa29.29■■■□□ 2.28
GPCPD1-206ENST00000481690 PDE6BP35913 854 aa29.28■■■□□ 2.28
GPCPD1-206ENST00000481690 BRIP1Q9BX63 1249 aa29.28■■■□□ 2.28
GPCPD1-206ENST00000481690 CCDC88AQ3V6T2 1871 aa29.27■■■□□ 2.28
GPCPD1-206ENST00000481690 RIPK4P57078 832 aa29.27■■■□□ 2.28
GPCPD1-206ENST00000481690 ST5P78524 1137 aa29.27■■■□□ 2.28
GPCPD1-206ENST00000481690 ZNF622Q969S3 477 aaKnown RBP eCLIP29.27■■■□□ 2.28
GPCPD1-206ENST00000481690 EIF4A1P60842 406 aaKnown RBP29.26■■■□□ 2.27
GPCPD1-206ENST00000481690 RASSF7Q02833 373 aa29.26■■■□□ 2.27
GPCPD1-206ENST00000481690 KIF3CO14782 793 aa29.25■■■□□ 2.27
GPCPD1-206ENST00000481690 CLEC4GQ6UXB4 293 aa29.25■■■□□ 2.27
GPCPD1-206ENST00000481690 NBPF5PQ86XG9 351 aaPredicted RBP29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms