RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 NLGN2Q8NFZ4 835 aa24.72■■□□□ 1.55
HSPG2-210ENST00000481644 COL15A1P39059 1388 aa24.71■■□□□ 1.55
HSPG2-210ENST00000481644 CCDC146Q8IYE0 955 aa24.71■■□□□ 1.55
HSPG2-210ENST00000481644 SRP68Q9UHB9 627 aaKnown RBP24.71■■□□□ 1.55
HSPG2-210ENST00000481644 KDM3BQ7LBC6 1761 aa24.7■■□□□ 1.55
HSPG2-210ENST00000481644 CANXP27824 592 aaKnown RBP24.7■■□□□ 1.54
HSPG2-210ENST00000481644 THUMPD2Q9BTF0 503 aaKnown RBP24.7■■□□□ 1.54
HSPG2-210ENST00000481644 CD2APQ9Y5K6 639 aa24.7■■□□□ 1.54
HSPG2-210ENST00000481644 RIPK4P57078 832 aa24.69■■□□□ 1.54
HSPG2-210ENST00000481644 ADAMTS8Q9UP79 889 aa24.69■■□□□ 1.54
HSPG2-210ENST00000481644 ZPR1O75312 459 aa24.68■■□□□ 1.54
HSPG2-210ENST00000481644 TMPOP42166 694 aaKnown RBP24.68■■□□□ 1.54
HSPG2-210ENST00000481644 PNISRQ8TF01 805 aaKnown RBP24.68■■□□□ 1.54
HSPG2-210ENST00000481644 RUNDC1Q96C34 613 aa24.68■■□□□ 1.54
HSPG2-210ENST00000481644 MIS18AQ9NYP9 233 aa24.68■■□□□ 1.54
HSPG2-210ENST00000481644 SNRPA1P09661 255 aaKnown RBP24.66■■□□□ 1.54
HSPG2-210ENST00000481644 LMOD3Q0VAK6 560 aa24.66■■□□□ 1.54
HSPG2-210ENST00000481644 FKBP8Q14318 412 aa24.66■■□□□ 1.54
HSPG2-210ENST00000481644 USPL1Q5W0Q7 1092 aa24.66■■□□□ 1.54
HSPG2-210ENST00000481644 EIF5P55010 431 aaKnown RBP24.65■■□□□ 1.54
HSPG2-210ENST00000481644 GPR162Q16538 588 aa24.65■■□□□ 1.54
HSPG2-210ENST00000481644 PELP1Q8IZL8 1130 aaKnown RBP24.65■■□□□ 1.54
HSPG2-210ENST00000481644 NARFQ9UHQ1 456 aa24.65■■□□□ 1.54
HSPG2-210ENST00000481644 RRP7AQ9Y3A4 280 aaKnown RBP24.65■■□□□ 1.54
HSPG2-210ENST00000481644 PARP3Q9Y6F1 533 aa24.65■■□□□ 1.54
HSPG2-210ENST00000481644 PRAMEF22A3QJZ6 481 aa24.64■■□□□ 1.54
HSPG2-210ENST00000481644 A1BGP04217 495 aa24.64■■□□□ 1.54
HSPG2-210ENST00000481644 USP16Q9Y5T5 823 aa24.64■■□□□ 1.54
HSPG2-210ENST00000481644 KIF13BQ9NQT8 1826 aa24.63■■□□□ 1.53
HSPG2-210ENST00000481644 LAMB4A4D0S4 1761 aa24.63■■□□□ 1.53
HSPG2-210ENST00000481644 A0A087WZG4 1122 aa24.63■■□□□ 1.53
HSPG2-210ENST00000481644 NEUROD2Q15784 382 aa24.63■■□□□ 1.53
HSPG2-210ENST00000481644 ZNF330Q9Y3S2 320 aaPredicted RBP24.63■■□□□ 1.53
HSPG2-210ENST00000481644 ANP32CO43423 234 aa24.62■■□□□ 1.53
HSPG2-210ENST00000481644 IL6STP40189 918 aaPredicted RBP24.62■■□□□ 1.53
HSPG2-210ENST00000481644 NPM2Q86SE8 214 aaKnown RBP24.61■■□□□ 1.53
HSPG2-210ENST00000481644 SCN7AQ01118 1682 aa24.6■■□□□ 1.53
HSPG2-210ENST00000481644 C10orf71Q711Q0 1435 aa24.6■■□□□ 1.53
HSPG2-210ENST00000481644 DDR1Q08345 913 aa24.59■■□□□ 1.53
HSPG2-210ENST00000481644 TSPYL4Q9UJ04 414 aa24.59■■□□□ 1.53
HSPG2-210ENST00000481644 TM4SF1P30408 202 aa24.58■■□□□ 1.53
HSPG2-210ENST00000481644 EIF4A1P60842 406 aaKnown RBP24.58■■□□□ 1.53
HSPG2-210ENST00000481644 CCDC184Q52MB2 194 aa24.58■■□□□ 1.53
HSPG2-210ENST00000481644 BCL2L12Q9HB09 334 aa24.58■■□□□ 1.53
HSPG2-210ENST00000481644 CHD4Q14839 1912 aa24.57■■□□□ 1.52
HSPG2-210ENST00000481644 PIP4K2AP48426 406 aaPredicted RBP24.57■■□□□ 1.52
HSPG2-210ENST00000481644 TBC1D2BQ9UPU7 963 aa24.57■■□□□ 1.52
HSPG2-210ENST00000481644 KIAA1551Q9HCM1 1747 aa24.57■■□□□ 1.52
HSPG2-210ENST00000481644 POLRMTO00411 1230 aaKnown RBP24.56■■□□□ 1.52
HSPG2-210ENST00000481644 GIGYF1O75420 1035 aaPredicted RBP24.56■■□□□ 1.52
HSPG2-210ENST00000481644 YY1P25490 414 aa24.56■■□□□ 1.52
HSPG2-210ENST00000481644 TRIM35Q9UPQ4 493 aa24.56■■□□□ 1.52
HSPG2-210ENST00000481644 N4BP2Q86UW6 1770 aaPredicted RBP24.56■■□□□ 1.52
HSPG2-210ENST00000481644 BCORQ6W2J9 1755 aa24.55■■□□□ 1.52
HSPG2-210ENST00000481644 YBX3P16989 372 aaKnown RBP eCLIP24.55■■□□□ 1.52
HSPG2-210ENST00000481644 NFIXQ14938 502 aa24.55■■□□□ 1.52
HSPG2-210ENST00000481644 BABAM1Q9NWV8 329 aa24.55■■□□□ 1.52
HSPG2-210ENST00000481644 AFDNP55196 1824 aaKnown RBP24.55■■□□□ 1.52
HSPG2-210ENST00000481644 PXDNLA1KZ92 1463 aa24.55■■□□□ 1.52
HSPG2-210ENST00000481644 TGFB2P61812 414 aa24.53■■□□□ 1.52
HSPG2-210ENST00000481644 DZIP3Q86Y13 1208 aaKnown RBP24.53■■□□□ 1.52
HSPG2-210ENST00000481644 NRXN2Q9P2S2 1712 aa24.52■■□□□ 1.52
HSPG2-210ENST00000481644 UTRNP46939 3433 aa24.52■■□□□ 1.52
HSPG2-210ENST00000481644 NBPF26B4DH59 902 aa24.52■■□□□ 1.52
HSPG2-210ENST00000481644 APAF1O14727 1248 aa24.52■■□□□ 1.52
HSPG2-210ENST00000481644 GRIN3BO60391 1043 aa24.52■■□□□ 1.52
HSPG2-210ENST00000481644 NBPF10Q6P3W6 841 aaKnown RBP24.52■■□□□ 1.52
HSPG2-210ENST00000481644 NBPF15Q8N660 670 aa24.52■■□□□ 1.52
HSPG2-210ENST00000481644 MRS2Q9HD23 443 aa24.52■■□□□ 1.52
HSPG2-210ENST00000481644 WWC3Q9ULE0 1092 aa24.52■■□□□ 1.52
HSPG2-210ENST00000481644 CAMTA2O94983 1202 aa24.51■■□□□ 1.51
HSPG2-210ENST00000481644 BICDL1Q6ZP65 573 aa24.51■■□□□ 1.51
HSPG2-210ENST00000481644 TBC1D9BQ66K14 1250 aa24.5■■□□□ 1.51
HSPG2-210ENST00000481644 LAS1LQ9Y4W2 734 aaKnown RBP24.5■■□□□ 1.51
HSPG2-210ENST00000481644 GOLGB1Q14789 3259 aaKnown RBP24.49■■□□□ 1.51
HSPG2-210ENST00000481644 A0A0G2JLW4 131 aa24.49■■□□□ 1.51
HSPG2-210ENST00000481644 SERPINB2P05120 415 aa24.49■■□□□ 1.51
HSPG2-210ENST00000481644 DPEP1P16444 411 aa24.48■■□□□ 1.51
HSPG2-210ENST00000481644 BRCA1P38398 1863 aaKnown RBP24.47■■□□□ 1.51
HSPG2-210ENST00000481644 CHL1O00533 1208 aa24.47■■□□□ 1.51
HSPG2-210ENST00000481644 ZNF652Q9Y2D9 606 aa24.46■■□□□ 1.51
HSPG2-210ENST00000481644 CARMIL3Q8ND23 1372 aa24.45■■□□□ 1.5
HSPG2-210ENST00000481644 ERBB4Q15303 1308 aa24.44■■□□□ 1.5
HSPG2-210ENST00000481644 CLEC4GQ6UXB4 293 aa24.44■■□□□ 1.5
HSPG2-210ENST00000481644 NGEFQ8N5V2 710 aa24.44■■□□□ 1.5
HSPG2-210ENST00000481644 SETDB2Q96T68 719 aa24.44■■□□□ 1.5
HSPG2-210ENST00000481644 MYL6BP14649 208 aa24.43■■□□□ 1.5
HSPG2-210ENST00000481644 EIF2S2P20042 333 aaKnown RBP24.43■■□□□ 1.5
HSPG2-210ENST00000481644 CFAP44Q96MT7 982 aa24.43■■□□□ 1.5
HSPG2-210ENST00000481644 CALD1Q05682 793 aaKnown RBP24.42■■□□□ 1.5
HSPG2-210ENST00000481644 BCS1LQ9Y276 419 aa24.42■■□□□ 1.5
HSPG2-210ENST00000481644 RGL2O15211 777 aa24.41■■□□□ 1.5
HSPG2-210ENST00000481644 KCNA3P22001 575 aa24.41■■□□□ 1.5
HSPG2-210ENST00000481644 CHRNA5P30532 468 aa24.41■■□□□ 1.5
HSPG2-210ENST00000481644 KRT24Q2M2I5 525 aa24.4■■□□□ 1.5
HSPG2-210ENST00000481644 PIM2Q9P1W9 311 aa24.4■■□□□ 1.5
HSPG2-210ENST00000481644 ANKRD31Q8N7Z5 1873 aa24.4■■□□□ 1.5
HSPG2-210ENST00000481644 DLEC1Q9Y238 1755 aa24.39■■□□□ 1.5
HSPG2-210ENST00000481644 NPHP1O15259 732 aa24.39■■□□□ 1.49
HSPG2-210ENST00000481644 KIF6Q6ZMV9 814 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms