RNA–Protein interactions for RNA: ENST00000481559.6

GRIA1-205, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 1 (best)

Gene GRIA1, Length 2,069 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-205ENST00000481559 ITPK1Q13572 414 aa13.29□□□□□ -0.28
GRIA1-205ENST00000481559 PDIA6Q15084 440 aa13.29□□□□□ -0.28
GRIA1-205ENST00000481559 FMNL2Q96PY5 1086 aa13.29□□□□□ -0.28
GRIA1-205ENST00000481559 BABAM1Q9NWV8 329 aa13.29□□□□□ -0.28
GRIA1-205ENST00000481559 TRIM27P14373 513 aa13.28□□□□□ -0.28
GRIA1-205ENST00000481559 NHSQ6T4R5 1651 aa13.28□□□□□ -0.28
GRIA1-205ENST00000481559 PALLDQ8WX93 1383 aa13.28□□□□□ -0.28
GRIA1-205ENST00000481559 NBPF26B4DH59 902 aa13.28□□□□□ -0.28
GRIA1-205ENST00000481559 NBPF14Q5TI25 921 aa13.28□□□□□ -0.28
GRIA1-205ENST00000481559 NBPF10Q6P3W6 841 aaKnown RBP13.28□□□□□ -0.28
GRIA1-205ENST00000481559 NBPF15Q8N660 670 aa13.28□□□□□ -0.28
GRIA1-205ENST00000481559 EXOC6Q8TAG9 804 aa13.28□□□□□ -0.28
GRIA1-205ENST00000481559 CRBNQ96SW2 442 aa13.28□□□□□ -0.28
GRIA1-205ENST00000481559 TJP1Q07157 1748 aa13.27□□□□□ -0.29
GRIA1-205ENST00000481559 SNRPA1P09661 255 aaKnown RBP13.27□□□□□ -0.29
GRIA1-205ENST00000481559 CANXP27824 592 aaKnown RBP13.26□□□□□ -0.29
GRIA1-205ENST00000481559 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
GRIA1-205ENST00000481559 AMIGO3Q86WK7 504 aa13.26□□□□□ -0.29
GRIA1-205ENST00000481559 COG6Q9Y2V7 657 aa13.26□□□□□ -0.29
GRIA1-205ENST00000481559 ZNF330Q9Y3S2 320 aaPredicted RBP13.26□□□□□ -0.29
GRIA1-205ENST00000481559 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
GRIA1-205ENST00000481559 ATP6V1AP38606 617 aa13.25□□□□□ -0.29
GRIA1-205ENST00000481559 SIK1P57059 783 aa13.25□□□□□ -0.29
GRIA1-205ENST00000481559 ALDH1L2Q3SY69 923 aa13.25□□□□□ -0.29
GRIA1-205ENST00000481559 LRP10Q7Z4F1 713 aa13.25□□□□□ -0.29
GRIA1-205ENST00000481559 ANP32EQ9BTT0 268 aa13.25□□□□□ -0.29
GRIA1-205ENST00000481559 CT47B1P0C2W7 299 aaPredicted RBP13.25□□□□□ -0.29
GRIA1-205ENST00000481559 CCDC30Q5VVM6 783 aa13.25□□□□□ -0.29
GRIA1-205ENST00000481559 LRRC4BQ9NT99 713 aa13.25□□□□□ -0.29
GRIA1-205ENST00000481559 MYH14Q7Z406 1995 aaKnown RBP13.24□□□□□ -0.29
GRIA1-205ENST00000481559 GOLGB1Q14789 3259 aaKnown RBP13.24□□□□□ -0.29
GRIA1-205ENST00000481559 LAMB4A4D0S4 1761 aa13.24□□□□□ -0.29
GRIA1-205ENST00000481559 FLIIQ13045 1269 aa13.24□□□□□ -0.29
GRIA1-205ENST00000481559 FAM196AQ6ZSG2 479 aa13.24□□□□□ -0.29
GRIA1-205ENST00000481559 TMEM57Q8N5G2 664 aa13.24□□□□□ -0.29
GRIA1-205ENST00000481559 LINC00116Q8NCU8 138 aa13.24□□□□□ -0.29
GRIA1-205ENST00000481559 ZBTB1Q9Y2K1 713 aa13.24□□□□□ -0.29
GRIA1-205ENST00000481559 CYP19A1P11511 503 aaPredicted RBP13.23□□□□□ -0.29
GRIA1-205ENST00000481559 ZKSCAN2Q63HK3 967 aa13.23□□□□□ -0.29
GRIA1-205ENST00000481559 ATF7IPQ6VMQ6 1270 aa13.23□□□□□ -0.29
GRIA1-205ENST00000481559 PROM2Q8N271 834 aa13.23□□□□□ -0.29
GRIA1-205ENST00000481559 TTLL7Q6ZT98 887 aa13.22□□□□□ -0.29
GRIA1-205ENST00000481559 STK31Q9BXU1 1019 aa13.22□□□□□ -0.29
GRIA1-205ENST00000481559 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
GRIA1-205ENST00000481559 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
GRIA1-205ENST00000481559 SLC4A10Q6U841 1118 aa13.22□□□□□ -0.29
GRIA1-205ENST00000481559 XAGE3Q8WTP9 111 aa13.22□□□□□ -0.29
GRIA1-205ENST00000481559 SRCAPQ6ZRS2 3230 aa13.21□□□□□ -0.29
GRIA1-205ENST00000481559 COPS6Q7L5N1 327 aa13.21□□□□□ -0.29
GRIA1-205ENST00000481559 ADCY9O60503 1353 aa13.21□□□□□ -0.3
GRIA1-205ENST00000481559 HOXB7P09629 217 aa13.2□□□□□ -0.3
GRIA1-205ENST00000481559 INTS5Q6P9B9 1019 aaKnown RBP13.2□□□□□ -0.3
GRIA1-205ENST00000481559 DBF4Q9UBU7 674 aaPredicted RBP13.2□□□□□ -0.3
GRIA1-205ENST00000481559 PI4KAP2A4QPH2 592 aa13.2□□□□□ -0.3
GRIA1-205ENST00000481559 CRKLP46109 303 aaKnown RBP13.2□□□□□ -0.3
GRIA1-205ENST00000481559 DZIP1LQ8IYY4 767 aaKnown RBP13.2□□□□□ -0.3
GRIA1-205ENST00000481559 PI4KAP1Q8N8J0 262 aa13.2□□□□□ -0.3
GRIA1-205ENST00000481559 DDX21Q9NR30 783 aaKnown RBP eCLIP13.2□□□□□ -0.3
GRIA1-205ENST00000481559 CCNL1Q9UK58 526 aaPredicted RBP13.2□□□□□ -0.3
GRIA1-205ENST00000481559 LY75O60449 1722 aa13.2□□□□□ -0.3
GRIA1-205ENST00000481559 APBA3O96018 575 aa13.19□□□□□ -0.3
GRIA1-205ENST00000481559 BRPF1P55201 1214 aaPredicted RBP13.19□□□□□ -0.3
GRIA1-205ENST00000481559 ARXQ96QS3 562 aa13.19□□□□□ -0.3
GRIA1-205ENST00000481559 KIF16BQ96L93 1317 aa13.19□□□□□ -0.3
GRIA1-205ENST00000481559 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
GRIA1-205ENST00000481559 TNS1Q9HBL0 1735 aaKnown RBP13.19□□□□□ -0.3
GRIA1-205ENST00000481559 ITPRIPQ8IWB1 547 aa13.19□□□□□ -0.3
GRIA1-205ENST00000481559 FTSJ3Q8IY81 847 aaKnown RBP13.19□□□□□ -0.3
GRIA1-205ENST00000481559 ZBTB3Q9H5J0 574 aa13.19□□□□□ -0.3
GRIA1-205ENST00000481559 C1orf115Q9H7X2 142 aa13.19□□□□□ -0.3
GRIA1-205ENST00000481559 NEFLP07196 543 aa13.18□□□□□ -0.3
GRIA1-205ENST00000481559 DEFB132Q7Z7B7 95 aa13.18□□□□□ -0.3
GRIA1-205ENST00000481559 VSIG10Q8N0Z9 540 aa13.18□□□□□ -0.3
GRIA1-205ENST00000481559 JARID2Q92833 1246 aaPredicted RBP13.18□□□□□ -0.3
GRIA1-205ENST00000481559 MAP3K2Q9Y2U5 619 aa13.18□□□□□ -0.3
GRIA1-205ENST00000481559 ABCC4O15439 1325 aa13.18□□□□□ -0.3
GRIA1-205ENST00000481559 CWF19L2Q2TBE0 894 aaKnown RBP13.17□□□□□ -0.3
GRIA1-205ENST00000481559 B4GALNT3Q6L9W6 998 aa13.17□□□□□ -0.3
GRIA1-205ENST00000481559 TBC1D2BQ9UPU7 963 aa13.17□□□□□ -0.3
GRIA1-205ENST00000481559 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
GRIA1-205ENST00000481559 EN1Q05925 392 aaPredicted RBP13.17□□□□□ -0.3
GRIA1-205ENST00000481559 HLFQ16534 295 aa13.16□□□□□ -0.3
GRIA1-205ENST00000481559 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.16□□□□□ -0.3
GRIA1-205ENST00000481559 SMARCC1Q92922 1105 aaPredicted RBP13.16□□□□□ -0.3
GRIA1-205ENST00000481559 ATP5J2-PTCD1G3V325 749 aa13.16□□□□□ -0.3
GRIA1-205ENST00000481559 PHF14O94880 888 aa13.16□□□□□ -0.3
GRIA1-205ENST00000481559 STARD3NLO95772 234 aa13.16□□□□□ -0.3
GRIA1-205ENST00000481559 MVPQ14764 893 aaKnown RBP13.16□□□□□ -0.3
GRIA1-205ENST00000481559 EZH2Q15910 746 aaKnown RBP13.16□□□□□ -0.3
GRIA1-205ENST00000481559 TXNRD1Q16881 649 aa13.16□□□□□ -0.3
GRIA1-205ENST00000481559 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
GRIA1-205ENST00000481559 PDE3AQ14432 1141 aa13.15□□□□□ -0.3
GRIA1-205ENST00000481559 MEIS3Q99687 375 aa13.15□□□□□ -0.3
GRIA1-205ENST00000481559 CCDC87Q9NVE4 849 aa13.15□□□□□ -0.3
GRIA1-205ENST00000481559 HYPKQ9NX55 129 aa13.15□□□□□ -0.3
GRIA1-205ENST00000481559 CACNA1FO60840 1977 aa13.15□□□□□ -0.31
GRIA1-205ENST00000481559 ARFGEF2Q9Y6D5 1785 aa13.14□□□□□ -0.31
GRIA1-205ENST00000481559 PTPRCP08575 1304 aa13.14□□□□□ -0.31
GRIA1-205ENST00000481559 IPO8O15397 1037 aaKnown RBP13.14□□□□□ -0.31
GRIA1-205ENST00000481559 SKAP1Q86WV1 359 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms