RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 NFE2L2Q16236 605 aa14.03□□□□□ -0.16
SSBP1-210ENST00000481508 SLC27A3Q5K4L6 730 aa14.03□□□□□ -0.16
SSBP1-210ENST00000481508 PIP4P2Q8N4L2 257 aa14.03□□□□□ -0.16
SSBP1-210ENST00000481508 THUMPD2Q9BTF0 503 aaKnown RBP14.03□□□□□ -0.16
SSBP1-210ENST00000481508 MRS2Q9HD23 443 aa14.03□□□□□ -0.16
SSBP1-210ENST00000481508 RRP7AQ9Y3A4 280 aaKnown RBP14.03□□□□□ -0.16
SSBP1-210ENST00000481508 ADCY9O60503 1353 aa14.02□□□□□ -0.17
SSBP1-210ENST00000481508 MAPK8IP3Q9UPT6 1336 aa14.02□□□□□ -0.17
SSBP1-210ENST00000481508 LOC102724428A0A0B4J2F2 783 aa14.02□□□□□ -0.17
SSBP1-210ENST00000481508 SIK1P57059 783 aa14.02□□□□□ -0.17
SSBP1-210ENST00000481508 SMARCC1Q92922 1105 aaPredicted RBP14.02□□□□□ -0.17
SSBP1-210ENST00000481508 KCNQ3O43525 872 aa14.01□□□□□ -0.17
SSBP1-210ENST00000481508 FXR2P51116 673 aaKnown RBP eCLIP14.01□□□□□ -0.17
SSBP1-210ENST00000481508 AMIGO3Q86WK7 504 aa14.01□□□□□ -0.17
SSBP1-210ENST00000481508 LINC00116Q8NCU8 138 aa14.01□□□□□ -0.17
SSBP1-210ENST00000481508 PNISRQ8TF01 805 aaKnown RBP14.01□□□□□ -0.17
SSBP1-210ENST00000481508 RUNDC1Q96C34 613 aa14.01□□□□□ -0.17
SSBP1-210ENST00000481508 PTCD1O75127 700 aaKnown RBP14□□□□□ -0.17
SSBP1-210ENST00000481508 TMPOP42166 694 aaKnown RBP14□□□□□ -0.17
SSBP1-210ENST00000481508 COL13A1Q5TAT6 717 aaPredicted RBP14□□□□□ -0.17
SSBP1-210ENST00000481508 SMIM5Q71RC9 77 aa14□□□□□ -0.17
SSBP1-210ENST00000481508 GPBP1L1Q9HC44 474 aaPredicted RBP14□□□□□ -0.17
SSBP1-210ENST00000481508 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
SSBP1-210ENST00000481508 HTATSF1O43719 755 aaKnown RBP13.98□□□□□ -0.17
SSBP1-210ENST00000481508 NEFMP07197 916 aa13.98□□□□□ -0.17
SSBP1-210ENST00000481508 ATP6V1AP38606 617 aa13.98□□□□□ -0.17
SSBP1-210ENST00000481508 RIPK4P57078 832 aa13.98□□□□□ -0.17
SSBP1-210ENST00000481508 TEFQ10587 303 aa13.98□□□□□ -0.17
SSBP1-210ENST00000481508 RTF1Q92541 710 aaKnown RBP13.98□□□□□ -0.17
SSBP1-210ENST00000481508 PNNQ9H307 717 aaKnown RBP13.98□□□□□ -0.17
SSBP1-210ENST00000481508 C4AP0C0L4 1744 aa13.98□□□□□ -0.17
SSBP1-210ENST00000481508 PNPLA7Q6ZV29 1317 aa13.97□□□□□ -0.17
SSBP1-210ENST00000481508 NEUROD2Q15784 382 aa13.97□□□□□ -0.17
SSBP1-210ENST00000481508 MIS18AQ9NYP9 233 aa13.97□□□□□ -0.17
SSBP1-210ENST00000481508 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
SSBP1-210ENST00000481508 APAF1O14727 1248 aa13.96□□□□□ -0.17
SSBP1-210ENST00000481508 LAMB4A4D0S4 1761 aa13.96□□□□□ -0.18
SSBP1-210ENST00000481508 BTBD11A6QL63 1104 aa13.95□□□□□ -0.18
SSBP1-210ENST00000481508 DIEXFQ68CQ4 756 aaKnown RBP13.95□□□□□ -0.18
SSBP1-210ENST00000481508 ZNF790Q6PG37 636 aa13.95□□□□□ -0.18
SSBP1-210ENST00000481508 DNAJC10Q8IXB1 793 aa13.95□□□□□ -0.18
SSBP1-210ENST00000481508 ZNF496Q96IT1 587 aaPredicted RBP13.95□□□□□ -0.18
SSBP1-210ENST00000481508 PRAMEF22A3QJZ6 481 aa13.94□□□□□ -0.18
SSBP1-210ENST00000481508 COL23A1Q86Y22 540 aaPredicted RBP13.93□□□□□ -0.18
SSBP1-210ENST00000481508 FAM9BQ8IZU0 186 aa13.93□□□□□ -0.18
SSBP1-210ENST00000481508 MIER1Q8N108 512 aa13.93□□□□□ -0.18
SSBP1-210ENST00000481508 TFCP2L1Q9NZI6 479 aa13.93□□□□□ -0.18
SSBP1-210ENST00000481508 HEG1Q9ULI3 1381 aa13.93□□□□□ -0.18
SSBP1-210ENST00000481508 CNTNAP4Q9C0A0 1308 aa13.92□□□□□ -0.18
SSBP1-210ENST00000481508 PHF14O94880 888 aa13.92□□□□□ -0.18
SSBP1-210ENST00000481508 POLD1P28340 1107 aa13.92□□□□□ -0.18
SSBP1-210ENST00000481508 TAF7Q15545 349 aaPredicted RBP13.92□□□□□ -0.18
SSBP1-210ENST00000481508 INTS5Q6P9B9 1019 aaKnown RBP13.92□□□□□ -0.18
SSBP1-210ENST00000481508 TTC5Q8N0Z6 440 aa13.92□□□□□ -0.18
SSBP1-210ENST00000481508 DNAJC5GQ8N7S2 189 aa13.92□□□□□ -0.18
SSBP1-210ENST00000481508 AK7Q96M32 723 aa13.92□□□□□ -0.18
SSBP1-210ENST00000481508 KIF3CO14782 793 aa13.91□□□□□ -0.18
SSBP1-210ENST00000481508 GNPATO15228 680 aa13.91□□□□□ -0.18
SSBP1-210ENST00000481508 CYP19A1P11511 503 aaPredicted RBP13.91□□□□□ -0.18
SSBP1-210ENST00000481508 CRKLP46109 303 aaKnown RBP13.91□□□□□ -0.18
SSBP1-210ENST00000481508 WWC3Q9ULE0 1092 aa13.91□□□□□ -0.18
SSBP1-210ENST00000481508 GRIN3BO60391 1043 aa13.9□□□□□ -0.18
SSBP1-210ENST00000481508 HTRA3P83110 453 aa13.9□□□□□ -0.18
SSBP1-210ENST00000481508 SPDYE1Q8NFV5 336 aaPredicted RBP13.9□□□□□ -0.18
SSBP1-210ENST00000481508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.89□□□□□ -0.19
SSBP1-210ENST00000481508 PRELPP51888 382 aa13.89□□□□□ -0.19
SSBP1-210ENST00000481508 LMOD3Q0VAK6 560 aa13.89□□□□□ -0.19
SSBP1-210ENST00000481508 RC3H1Q5TC82 1133 aaKnown RBP13.89□□□□□ -0.19
SSBP1-210ENST00000481508 TNS4Q8IZW8 715 aa13.89□□□□□ -0.19
SSBP1-210ENST00000481508 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
SSBP1-210ENST00000481508 FMNL2Q96PY5 1086 aa13.89□□□□□ -0.19
SSBP1-210ENST00000481508 CCER2I3L3R5 266 aa13.88□□□□□ -0.19
SSBP1-210ENST00000481508 APLP1P51693 650 aa13.88□□□□□ -0.19
SSBP1-210ENST00000481508 MSL1Q68DK7 614 aa13.88□□□□□ -0.19
SSBP1-210ENST00000481508 ZBTB1Q9Y2K1 713 aa13.88□□□□□ -0.19
SSBP1-210ENST00000481508 USP16Q9Y5T5 823 aa13.88□□□□□ -0.19
SSBP1-210ENST00000481508 N4BP2Q86UW6 1770 aaPredicted RBP13.87□□□□□ -0.19
SSBP1-210ENST00000481508 RPS6KA4O75676 772 aa13.87□□□□□ -0.19
SSBP1-210ENST00000481508 SLC34A2O95436 690 aa13.87□□□□□ -0.19
SSBP1-210ENST00000481508 PIP4K2AP48426 406 aaPredicted RBP13.87□□□□□ -0.19
SSBP1-210ENST00000481508 EIF4A1P60842 406 aaKnown RBP13.87□□□□□ -0.19
SSBP1-210ENST00000481508 KRT24Q2M2I5 525 aa13.87□□□□□ -0.19
SSBP1-210ENST00000481508 CCDC87Q9NVE4 849 aa13.87□□□□□ -0.19
SSBP1-210ENST00000481508 TSPYL4Q9UJ04 414 aa13.87□□□□□ -0.19
SSBP1-210ENST00000481508 SALL2Q9Y467 1007 aaPredicted RBP13.87□□□□□ -0.19
SSBP1-210ENST00000481508 SOS1Q07889 1333 aaPredicted RBP13.87□□□□□ -0.19
SSBP1-210ENST00000481508 BCORQ6W2J9 1755 aa13.86□□□□□ -0.19
SSBP1-210ENST00000481508 SCN7AQ01118 1682 aa13.86□□□□□ -0.19
SSBP1-210ENST00000481508 CHL1O00533 1208 aa13.86□□□□□ -0.19
SSBP1-210ENST00000481508 A1BGP04217 495 aa13.86□□□□□ -0.19
SSBP1-210ENST00000481508 SSFA2P28290 1259 aa13.86□□□□□ -0.19
SSBP1-210ENST00000481508 LAS1LQ9Y4W2 734 aaKnown RBP13.86□□□□□ -0.19
SSBP1-210ENST00000481508 KIAA1551Q9HCM1 1747 aa13.85□□□□□ -0.19
SSBP1-210ENST00000481508 ZNF853P0CG23 659 aa13.85□□□□□ -0.19
SSBP1-210ENST00000481508 CANXP27824 592 aaKnown RBP13.85□□□□□ -0.19
SSBP1-210ENST00000481508 ARHGEF1Q92888 912 aaKnown RBP13.85□□□□□ -0.19
SSBP1-210ENST00000481508 SRP68Q9UHB9 627 aaKnown RBP13.85□□□□□ -0.19
SSBP1-210ENST00000481508 RTCBQ9Y3I0 505 aaKnown RBP13.85□□□□□ -0.19
SSBP1-210ENST00000481508 SNRPA1P09661 255 aaKnown RBP13.84□□□□□ -0.19
SSBP1-210ENST00000481508 WWC1Q8IX03 1113 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms