RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 ARID5AQ03989 594 aa13.41□□□□□ -0.26
TRIM27-205ENST00000481474 NCBP1Q09161 790 aaKnown RBP13.41□□□□□ -0.26
TRIM27-205ENST00000481474 CCDC66A2RUB6 948 aa13.41□□□□□ -0.26
TRIM27-205ENST00000481474 FILIP1Q7Z7B0 1213 aa13.41□□□□□ -0.26
TRIM27-205ENST00000481474 RNF169Q8NCN4 708 aa13.41□□□□□ -0.26
TRIM27-205ENST00000481474 GPHNQ9NQX3 736 aaPredicted RBP13.41□□□□□ -0.26
TRIM27-205ENST00000481474 KIF5CO60282 957 aa13.41□□□□□ -0.26
TRIM27-205ENST00000481474 IKBKGQ9Y6K9 419 aa13.41□□□□□ -0.26
TRIM27-205ENST00000481474 WRNQ14191 1432 aaPredicted RBP eCLIP13.4□□□□□ -0.26
TRIM27-205ENST00000481474 SPDYE16A6NNV3 312 aaPredicted RBP13.4□□□□□ -0.26
TRIM27-205ENST00000481474 PIP4K2AP48426 406 aaPredicted RBP13.4□□□□□ -0.26
TRIM27-205ENST00000481474 HLTFQ14527 1009 aaKnown RBP eCLIP13.4□□□□□ -0.26
TRIM27-205ENST00000481474 DIXDC1Q155Q3 683 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 SPDYE2Q495Y8 402 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 LARP6Q9BRS8 491 aaKnown RBP13.4□□□□□ -0.26
TRIM27-205ENST00000481474 EHMT1Q9H9B1 1298 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 CAPN15O75808 1086 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 ERCC3P19447 782 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 CFAP57Q96MR6 1250 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 TRMT112Q9UI30 125 aaKnown RBP13.4□□□□□ -0.26
TRIM27-205ENST00000481474 ACTN2P35609 894 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 FAM47CQ5HY64 1035 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 CRCPO75575 148 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 CCDC174Q6PII3 467 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 FAM107BQ9H098 131 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 SULT6B1Q6IMI4 303 aa13.4□□□□□ -0.26
TRIM27-205ENST00000481474 OGFOD1Q8N543 542 aa13.39□□□□□ -0.27
TRIM27-205ENST00000481474 SORBS3O60504 671 aa13.39□□□□□ -0.27
TRIM27-205ENST00000481474 SPA17Q15506 151 aa13.39□□□□□ -0.27
TRIM27-205ENST00000481474 ANKFY1Q9P2R3 1169 aa13.39□□□□□ -0.27
TRIM27-205ENST00000481474 EEF2P13639 858 aaKnown RBP13.39□□□□□ -0.27
TRIM27-205ENST00000481474 RSPH3Q86UC2 560 aa13.39□□□□□ -0.27
TRIM27-205ENST00000481474 TFCP2L1Q9NZI6 479 aa13.39□□□□□ -0.27
TRIM27-205ENST00000481474 ROCK1Q13464 1354 aa13.39□□□□□ -0.27
TRIM27-205ENST00000481474 IFRD2Q12894 506 aaPredicted RBP13.39□□□□□ -0.27
TRIM27-205ENST00000481474 ITM2BQ9Y287 266 aa13.39□□□□□ -0.27
TRIM27-205ENST00000481474 CALM1P0DP23 149 aa13.39□□□□□ -0.27
TRIM27-205ENST00000481474 CALM2P0DP24 149 aa13.39□□□□□ -0.27
TRIM27-205ENST00000481474 CALM3P0DP25 149 aa13.39□□□□□ -0.27
TRIM27-205ENST00000481474 A0A1W2PRG0 241 aa13.38□□□□□ -0.27
TRIM27-205ENST00000481474 RRS1Q15050 365 aaKnown RBP13.38□□□□□ -0.27
TRIM27-205ENST00000481474 ZSCAN25Q6NSZ9 544 aa13.38□□□□□ -0.27
TRIM27-205ENST00000481474 EPSTI1Q96J88 318 aa13.38□□□□□ -0.27
TRIM27-205ENST00000481474 UIMC1Q96RL1 719 aa13.38□□□□□ -0.27
TRIM27-205ENST00000481474 FSD2A1L4K1 749 aa13.38□□□□□ -0.27
TRIM27-205ENST00000481474 ST5P78524 1137 aa13.38□□□□□ -0.27
TRIM27-205ENST00000481474 FAM200AQ8TCP9 573 aa13.38□□□□□ -0.27
TRIM27-205ENST00000481474 JMYQ8N9B5 988 aa13.38□□□□□ -0.27
TRIM27-205ENST00000481474 NOC2LQ9Y3T9 749 aaKnown RBP13.38□□□□□ -0.27
TRIM27-205ENST00000481474 ERLIN1O75477 346 aa13.38□□□□□ -0.27
TRIM27-205ENST00000481474 MAP7D1Q3KQU3 841 aa13.38□□□□□ -0.27
TRIM27-205ENST00000481474 ZYXQ15942 572 aaKnown RBP13.37□□□□□ -0.27
TRIM27-205ENST00000481474 ATF7IPQ6VMQ6 1270 aa13.37□□□□□ -0.27
TRIM27-205ENST00000481474 CHMP6Q96FZ7 201 aa13.37□□□□□ -0.27
TRIM27-205ENST00000481474 MYD88Q99836 296 aa13.37□□□□□ -0.27
TRIM27-205ENST00000481474 DACH1Q9UI36 760 aa13.37□□□□□ -0.27
TRIM27-205ENST00000481474 LRRC45Q96CN5 670 aa13.37□□□□□ -0.27
TRIM27-205ENST00000481474 CFAP100Q494V2 611 aa13.37□□□□□ -0.27
TRIM27-205ENST00000481474 NAPBQ9H115 298 aa13.37□□□□□ -0.27
TRIM27-205ENST00000481474 ZNF287Q9HBT7 754 aa13.37□□□□□ -0.27
TRIM27-205ENST00000481474 AFG3L2Q9Y4W6 797 aa13.37□□□□□ -0.27
TRIM27-205ENST00000481474 GNAI1P63096 354 aa13.37□□□□□ -0.27
TRIM27-205ENST00000481474 BAG4O95429 457 aaKnown RBP13.36□□□□□ -0.27
TRIM27-205ENST00000481474 PPARDQ03181 441 aa13.36□□□□□ -0.27
TRIM27-205ENST00000481474 SPATA32Q96LK8 384 aa13.36□□□□□ -0.27
TRIM27-205ENST00000481474 ANKRD30AQ9BXX3 1397 aa13.36□□□□□ -0.27
TRIM27-205ENST00000481474 STX6O43752 255 aa13.36□□□□□ -0.27
TRIM27-205ENST00000481474 LARP1BQ659C4 914 aaKnown RBP13.36□□□□□ -0.27
TRIM27-205ENST00000481474 GSTA5Q7RTV2 222 aa13.36□□□□□ -0.27
TRIM27-205ENST00000481474 CYP46A1Q9Y6A2 500 aa13.36□□□□□ -0.27
TRIM27-205ENST00000481474 MRRFQ96E11 262 aaKnown RBP13.36□□□□□ -0.27
TRIM27-205ENST00000481474 TMCO3Q6UWJ1 677 aa13.36□□□□□ -0.27
TRIM27-205ENST00000481474 DDX46Q7L014 1031 aaKnown RBP13.36□□□□□ -0.27
TRIM27-205ENST00000481474 CCDC40Q4G0X9 1142 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 DACT3Q96B18 629 aaPredicted RBP13.35□□□□□ -0.27
TRIM27-205ENST00000481474 NBPF8Q3BBV2 869 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 NBPF14Q5TI25 921 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 PPP1R21Q6ZMI0 780 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 PARD3BQ8TEW8 1205 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 FKBP15Q5T1M5 1219 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 CCT6BQ92526 530 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 JAKMIP1Q96N16 626 aaKnown RBP13.35□□□□□ -0.27
TRIM27-205ENST00000481474 TMEM266Q2M3C6 531 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 ARHGAP29Q52LW3 1261 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 GOLGA6CA6NDK9 693 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 GOLGA6BA6NDN3 693 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 GOLGA6DP0CG33 693 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 CHST3Q7LGC8 479 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 GTPBP4Q9BZE4 634 aaKnown RBP13.35□□□□□ -0.27
TRIM27-205ENST00000481474 GOLGA6AQ9NYA3 693 aa13.35□□□□□ -0.27
TRIM27-205ENST00000481474 SMIM23A6NLE4 172 aa13.34□□□□□ -0.27
TRIM27-205ENST00000481474 PLCB3Q01970 1234 aa13.34□□□□□ -0.27
TRIM27-205ENST00000481474 ZBTB16Q05516 673 aa13.34□□□□□ -0.27
TRIM27-205ENST00000481474 PSMD6Q15008 389 aa13.34□□□□□ -0.27
TRIM27-205ENST00000481474 NASPP49321 788 aaPredicted RBP13.34□□□□□ -0.27
TRIM27-205ENST00000481474 ACBD5Q5T8D3 534 aaPredicted RBP13.34□□□□□ -0.27
TRIM27-205ENST00000481474 JDP2Q8WYK2 163 aa13.34□□□□□ -0.27
TRIM27-205ENST00000481474 GNAI2P04899 355 aa13.34□□□□□ -0.27
TRIM27-205ENST00000481474 IFIT1P09914 478 aaKnown RBP13.34□□□□□ -0.27
TRIM27-205ENST00000481474 CCDC157Q569K6 752 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms