RNA–Protein interactions for RNA: ENST00000481238.1

TMED4-205, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 1 (best) BASIC

Gene TMED4, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-205ENST00000481238 NUTM2EB1AL46 878 aaPredicted RBP28.39■■■□□ 2.13
TMED4-205ENST00000481238 NUTM2AQ8IVF1 878 aaPredicted RBP28.39■■■□□ 2.13
TMED4-205ENST00000481238 USP16Q9Y5T5 823 aa28.39■■■□□ 2.13
TMED4-205ENST00000481238 HMMRO75330 724 aa28.37■■■□□ 2.13
TMED4-205ENST00000481238 DDX58O95786 925 aaKnown RBP28.37■■■□□ 2.13
TMED4-205ENST00000481238 LNPKQ9C0E8 428 aa28.37■■■□□ 2.13
TMED4-205ENST00000481238 THRAP3Q9Y2W1 955 aaKnown RBP28.37■■■□□ 2.13
TMED4-205ENST00000481238 C5P01031 1676 aa28.36■■■□□ 2.13
TMED4-205ENST00000481238 EXOC5O00471 708 aa28.36■■■□□ 2.13
TMED4-205ENST00000481238 CDCA7Q9BWT1 371 aaPredicted RBP28.36■■■□□ 2.13
TMED4-205ENST00000481238 MAP3K2Q9Y2U5 619 aa28.35■■■□□ 2.13
TMED4-205ENST00000481238 PLCH1Q4KWH8 1693 aa28.35■■■□□ 2.13
TMED4-205ENST00000481238 SPATA31A1Q5TZJ5 1347 aa28.34■■■□□ 2.13
TMED4-205ENST00000481238 UBTFL1P0CB47 393 aaPredicted RBP28.34■■■□□ 2.13
TMED4-205ENST00000481238 ALDH1L1O75891 902 aa28.33■■■□□ 2.13
TMED4-205ENST00000481238 ATP8B2P98198 1209 aa28.33■■■□□ 2.13
TMED4-205ENST00000481238 TMOD3Q9NYL9 352 aa28.33■■■□□ 2.13
TMED4-205ENST00000481238 LRP10Q7Z4F1 713 aa28.32■■■□□ 2.12
TMED4-205ENST00000481238 NRAPQ86VF7 1730 aa28.31■■■□□ 2.12
TMED4-205ENST00000481238 MYL6BP14649 208 aa28.31■■■□□ 2.12
TMED4-205ENST00000481238 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
TMED4-205ENST00000481238 ERBB4Q15303 1308 aa28.3■■■□□ 2.12
TMED4-205ENST00000481238 TNS2Q63HR2 1409 aa28.3■■■□□ 2.12
TMED4-205ENST00000481238 SLIT2O94813 1529 aa28.3■■■□□ 2.12
TMED4-205ENST00000481238 AIMP1Q12904 312 aaKnown RBP28.3■■■□□ 2.12
TMED4-205ENST00000481238 LRRFIP2Q9Y608 721 aaKnown RBP28.3■■■□□ 2.12
TMED4-205ENST00000481238 GLI3P10071 1580 aa28.3■■■□□ 2.12
TMED4-205ENST00000481238 JCADQ9P266 1359 aa28.29■■■□□ 2.12
TMED4-205ENST00000481238 PAPPAQ13219 1627 aa28.29■■■□□ 2.12
TMED4-205ENST00000481238 KCPQ6ZWJ8 1503 aa28.29■■■□□ 2.12
TMED4-205ENST00000481238 COPS6Q7L5N1 327 aa28.29■■■□□ 2.12
TMED4-205ENST00000481238 XAGE3Q8WTP9 111 aa28.29■■■□□ 2.12
TMED4-205ENST00000481238 SPATA31A5Q5VU36 1347 aa28.28■■■□□ 2.12
TMED4-205ENST00000481238 SPATA31A7Q8IWB4 1347 aa28.28■■■□□ 2.12
TMED4-205ENST00000481238 UBR2Q8IWV8 1755 aa28.28■■■□□ 2.12
TMED4-205ENST00000481238 ANP32AP39687 249 aaKnown RBP28.28■■■□□ 2.12
TMED4-205ENST00000481238 LINS1Q8NG48 757 aa28.28■■■□□ 2.12
TMED4-205ENST00000481238 PIGBQ92521 554 aa28.28■■■□□ 2.12
TMED4-205ENST00000481238 RIC3Q7Z5B4 369 aa28.27■■■□□ 2.12
TMED4-205ENST00000481238 TOGARAM1Q9Y4F4 1720 aa28.27■■■□□ 2.12
TMED4-205ENST00000481238 CERKQ8TCT0 537 aa28.27■■■□□ 2.12
TMED4-205ENST00000481238 ZBTB47Q9UFB7 747 aaPredicted RBP28.26■■■□□ 2.11
TMED4-205ENST00000481238 NWD2Q9ULI1 1742 aa28.26■■■□□ 2.11
TMED4-205ENST00000481238 PTCD1O75127 700 aaKnown RBP28.25■■■□□ 2.11
TMED4-205ENST00000481238 NBPF7P0C2Y1 421 aaPredicted RBP28.25■■■□□ 2.11
TMED4-205ENST00000481238 IBTKQ9P2D0 1353 aaPredicted RBP28.25■■■□□ 2.11
TMED4-205ENST00000481238 BARGINQ6ZT62 677 aa28.24■■■□□ 2.11
TMED4-205ENST00000481238 ANKRD13DQ6ZTN6 518 aa28.24■■■□□ 2.11
TMED4-205ENST00000481238 LAMB4A4D0S4 1761 aa28.24■■■□□ 2.11
TMED4-205ENST00000481238 WNK3Q9BYP7 1800 aa28.24■■■□□ 2.11
TMED4-205ENST00000481238 PNMA6EA0A0J9YXQ4 647 aa28.24■■■□□ 2.11
TMED4-205ENST00000481238 HDAC5Q9UQL6 1122 aa28.24■■■□□ 2.11
TMED4-205ENST00000481238 LRP6O75581 1613 aa28.24■■■□□ 2.11
TMED4-205ENST00000481238 DDB1Q16531 1140 aa28.22■■■□□ 2.11
TMED4-205ENST00000481238 UNC5CLQ8IV45 518 aa28.22■■■□□ 2.11
TMED4-205ENST00000481238 VSIG10Q8N0Z9 540 aa28.22■■■□□ 2.11
TMED4-205ENST00000481238 METTL22Q9BUU2 404 aaPredicted RBP28.22■■■□□ 2.11
TMED4-205ENST00000481238 ATG3Q9NT62 314 aa28.22■■■□□ 2.11
TMED4-205ENST00000481238 C9orf78Q9NZ63 289 aaPredicted RBP28.22■■■□□ 2.11
TMED4-205ENST00000481238 NBPF26B4DH59 902 aa28.22■■■□□ 2.11
TMED4-205ENST00000481238 NBPF14Q5TI25 921 aa28.22■■■□□ 2.11
TMED4-205ENST00000481238 NBPF10Q6P3W6 841 aaKnown RBP28.22■■■□□ 2.11
TMED4-205ENST00000481238 NBPF15Q8N660 670 aa28.22■■■□□ 2.11
TMED4-205ENST00000481238 SSH3Q8TE77 659 aa28.22■■■□□ 2.11
TMED4-205ENST00000481238 ASAP1Q9ULH1 1129 aa28.22■■■□□ 2.11
TMED4-205ENST00000481238 PIP4K2AP48426 406 aaPredicted RBP28.21■■■□□ 2.11
TMED4-205ENST00000481238 NEXNQ0ZGT2 675 aa28.21■■■□□ 2.11
TMED4-205ENST00000481238 CWF19L2Q2TBE0 894 aaKnown RBP28.21■■■□□ 2.11
TMED4-205ENST00000481238 NPM2Q86SE8 214 aaKnown RBP28.21■■■□□ 2.11
TMED4-205ENST00000481238 TEX13AQ9BXU3 409 aaPredicted RBP28.21■■■□□ 2.11
TMED4-205ENST00000481238 BCL9O00512 1426 aa28.2■■■□□ 2.11
TMED4-205ENST00000481238 UTYO14607 1347 aa28.2■■■□□ 2.11
TMED4-205ENST00000481238 IGKV5-2P06315 115 aa28.19■■■□□ 2.1
TMED4-205ENST00000481238 POLA2Q14181 598 aa28.19■■■□□ 2.1
TMED4-205ENST00000481238 BMP2KLQ5H9B9 411 aa28.19■■■□□ 2.1
TMED4-205ENST00000481238 CCDC9Q9Y3X0 531 aaKnown RBP28.19■■■□□ 2.1
TMED4-205ENST00000481238 PPP1R42Q7Z4L9 355 aa28.19■■■□□ 2.1
TMED4-205ENST00000481238 PLEKHM2Q8IWE5 1019 aa28.19■■■□□ 2.1
TMED4-205ENST00000481238 NGLY1Q96IV0 654 aa28.19■■■□□ 2.1
TMED4-205ENST00000481238 SPATA31A6Q5VVP1 1343 aa28.18■■■□□ 2.1
TMED4-205ENST00000481238 PLBD2Q8NHP8 589 aa28.18■■■□□ 2.1
TMED4-205ENST00000481238 GRM8O00222 908 aa28.17■■■□□ 2.1
TMED4-205ENST00000481238 A1BGP04217 495 aa28.17■■■□□ 2.1
TMED4-205ENST00000481238 NEURL1BA8MQ27 555 aa28.16■■■□□ 2.1
TMED4-205ENST00000481238 C8orf37Q96NL8 207 aa28.16■■■□□ 2.1
TMED4-205ENST00000481238 SEC24BO95487 1268 aa28.16■■■□□ 2.1
TMED4-205ENST00000481238 VPS72Q15906 364 aa28.16■■■□□ 2.1
TMED4-205ENST00000481238 C16orf71Q8IYS4 520 aaPredicted RBP28.16■■■□□ 2.1
TMED4-205ENST00000481238 FNBP4Q8N3X1 1017 aaPredicted RBP28.16■■■□□ 2.1
TMED4-205ENST00000481238 MYD88Q99836 296 aa28.16■■■□□ 2.1
TMED4-205ENST00000481238 EXOC6BQ9Y2D4 811 aa28.16■■■□□ 2.1
TMED4-205ENST00000481238 ITGB4P16144 1822 aa28.15■■■□□ 2.1
TMED4-205ENST00000481238 SMARCA5O60264 1052 aaPredicted RBP28.15■■■□□ 2.1
TMED4-205ENST00000481238 MTX1Q13505 466 aa28.15■■■□□ 2.1
TMED4-205ENST00000481238 IPO9Q96P70 1041 aaKnown RBP28.15■■■□□ 2.1
TMED4-205ENST00000481238 APBB1O00213 710 aa28.14■■■□□ 2.1
TMED4-205ENST00000481238 BCL9LQ86UU0 1499 aa28.14■■■□□ 2.1
TMED4-205ENST00000481238 SRGAP3O43295 1099 aa28.14■■■□□ 2.09
TMED4-205ENST00000481238 PRIM1P49642 420 aaKnown RBP28.14■■■□□ 2.09
TMED4-205ENST00000481238 GCKRQ14397 625 aa28.14■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms