RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 IBTKQ9P2D0 1353 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-203ENST00000480484 MAP2P11137 1827 aaKnown RBP12.35□□□□□ -0.43
COMMD4-203ENST00000480484 NALCNQ8IZF0 1738 aa12.35□□□□□ -0.43
COMMD4-203ENST00000480484 COL22A1Q8NFW1 1626 aaPredicted RBP12.35□□□□□ -0.43
COMMD4-203ENST00000480484 ATP7BP35670 1465 aa12.34□□□□□ -0.43
COMMD4-203ENST00000480484 NUCB2P80303 420 aa12.34□□□□□ -0.43
COMMD4-203ENST00000480484 SASS6Q6UVJ0 657 aa12.34□□□□□ -0.43
COMMD4-203ENST00000480484 EXOC8Q8IYI6 725 aa12.34□□□□□ -0.43
COMMD4-203ENST00000480484 TSC1Q92574 1164 aa12.34□□□□□ -0.43
COMMD4-203ENST00000480484 PRR36Q9H6K5 1346 aa12.34□□□□□ -0.43
COMMD4-203ENST00000480484 IPO8O15397 1037 aaKnown RBP12.34□□□□□ -0.43
COMMD4-203ENST00000480484 MTERF4Q7Z6M4 381 aaKnown RBP12.34□□□□□ -0.43
COMMD4-203ENST00000480484 SGSM3Q96HU1 749 aa12.34□□□□□ -0.43
COMMD4-203ENST00000480484 C8orf58Q8NAV2 365 aa12.33□□□□□ -0.43
COMMD4-203ENST00000480484 PDLIM2Q96JY6 352 aa12.33□□□□□ -0.43
COMMD4-203ENST00000480484 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.43
COMMD4-203ENST00000480484 CDC42BPGQ6DT37 1551 aa12.33□□□□□ -0.44
COMMD4-203ENST00000480484 FAM135BQ49AJ0 1406 aa12.33□□□□□ -0.44
COMMD4-203ENST00000480484 ZBTB7BO15156 539 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-203ENST00000480484 CEBPAP49715 358 aaPredicted RBP12.33□□□□□ -0.44
COMMD4-203ENST00000480484 CCDC39Q9UFE4 941 aa12.33□□□□□ -0.44
COMMD4-203ENST00000480484 FCHSD2O94868 740 aa12.33□□□□□ -0.44
COMMD4-203ENST00000480484 GPT2Q8TD30 523 aa12.33□□□□□ -0.44
COMMD4-203ENST00000480484 PLSCR2Q9NRY7 297 aa12.33□□□□□ -0.44
COMMD4-203ENST00000480484 KIF1AQ12756 1690 aa12.33□□□□□ -0.44
COMMD4-203ENST00000480484 PLEKHG1Q9ULL1 1385 aa12.33□□□□□ -0.44
COMMD4-203ENST00000480484 CT47B1P0C2W7 299 aaPredicted RBP12.32□□□□□ -0.44
COMMD4-203ENST00000480484 RBM26Q5T8P6 1007 aaKnown RBP12.32□□□□□ -0.44
COMMD4-203ENST00000480484 PPME1Q9Y570 386 aa12.32□□□□□ -0.44
COMMD4-203ENST00000480484 PTCH1Q13635 1447 aa12.32□□□□□ -0.44
COMMD4-203ENST00000480484 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
COMMD4-203ENST00000480484 CLEC17AQ6ZS10 378 aa12.32□□□□□ -0.44
COMMD4-203ENST00000480484 IVNS1ABPQ9Y6Y0 642 aa12.32□□□□□ -0.44
COMMD4-203ENST00000480484 ROBO2Q9HCK4 1378 aa12.32□□□□□ -0.44
COMMD4-203ENST00000480484 CDC45O75419 566 aa12.32□□□□□ -0.44
COMMD4-203ENST00000480484 IL13P35225 146 aa12.32□□□□□ -0.44
COMMD4-203ENST00000480484 MIS18AQ9NYP9 233 aa12.31□□□□□ -0.44
COMMD4-203ENST00000480484 TMEM63CQ9P1W3 806 aa12.31□□□□□ -0.44
COMMD4-203ENST00000480484 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
COMMD4-203ENST00000480484 GIMAP6Q6P9H5 292 aa12.31□□□□□ -0.44
COMMD4-203ENST00000480484 LTKP29376 864 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 CBX1P83916 185 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 RABEP1Q15276 862 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.3□□□□□ -0.44
COMMD4-203ENST00000480484 IL16Q14005 1332 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 SOX12O15370 315 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 DCCP43146 1447 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 CCDC94Q9BW85 323 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-203ENST00000480484 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
COMMD4-203ENST00000480484 NFE2L2Q16236 605 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 LRSAM1Q6UWE0 723 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 MICAL1Q8TDZ2 1067 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 SLC26A8Q96RN1 970 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 LARP6Q9BRS8 491 aaKnown RBP12.3□□□□□ -0.44
COMMD4-203ENST00000480484 GDPD2Q9HCC8 539 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
COMMD4-203ENST00000480484 MST1RQ04912 1400 aa12.29□□□□□ -0.44
COMMD4-203ENST00000480484 VAMP4O75379 141 aa12.29□□□□□ -0.44
COMMD4-203ENST00000480484 KIAA2012Q0VF49 1180 aa12.29□□□□□ -0.44
COMMD4-203ENST00000480484 MRRFQ96E11 262 aaKnown RBP12.29□□□□□ -0.44
COMMD4-203ENST00000480484 COG3Q96JB2 828 aa12.29□□□□□ -0.44
COMMD4-203ENST00000480484 MBIPQ9NS73 344 aa12.29□□□□□ -0.44
COMMD4-203ENST00000480484 ZDHHC9Q9Y397 364 aa12.29□□□□□ -0.44
COMMD4-203ENST00000480484 GCC1Q96CN9 775 aa12.29□□□□□ -0.44
COMMD4-203ENST00000480484 ZNF830Q96NB3 372 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-203ENST00000480484 TMEM2Q9UHN6 1383 aa12.28□□□□□ -0.44
COMMD4-203ENST00000480484 MCM5P33992 734 aa12.28□□□□□ -0.44
COMMD4-203ENST00000480484 AKAP12Q02952 1782 aa12.28□□□□□ -0.44
COMMD4-203ENST00000480484 C17orf53Q8N3J3 647 aaPredicted RBP12.28□□□□□ -0.44
COMMD4-203ENST00000480484 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
COMMD4-203ENST00000480484 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.28□□□□□ -0.44
COMMD4-203ENST00000480484 AHDC1Q5TGY3 1603 aaPredicted RBP12.27□□□□□ -0.44
COMMD4-203ENST00000480484 ADAMTS13Q76LX8 1427 aa12.27□□□□□ -0.45
COMMD4-203ENST00000480484 PLEKHM2Q8IWE5 1019 aa12.27□□□□□ -0.45
COMMD4-203ENST00000480484 ARHGEF1Q92888 912 aaKnown RBP12.27□□□□□ -0.45
COMMD4-203ENST00000480484 SUGT1Q9Y2Z0 365 aa12.27□□□□□ -0.45
COMMD4-203ENST00000480484 CYP2E1P05181 493 aaPredicted RBP12.26□□□□□ -0.45
COMMD4-203ENST00000480484 DMTNQ08495 405 aa12.26□□□□□ -0.45
COMMD4-203ENST00000480484 CDK12Q9NYV4 1490 aaPredicted RBP12.26□□□□□ -0.45
COMMD4-203ENST00000480484 MON2Q7Z3U7 1717 aa12.26□□□□□ -0.45
COMMD4-203ENST00000480484 ABCA3Q99758 1704 aa12.26□□□□□ -0.45
COMMD4-203ENST00000480484 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.26□□□□□ -0.45
COMMD4-203ENST00000480484 ST18O60284 1047 aa12.26□□□□□ -0.45
COMMD4-203ENST00000480484 NRKQ7Z2Y5 1582 aa12.26□□□□□ -0.45
COMMD4-203ENST00000480484 RAB11FIP3O75154 756 aa12.26□□□□□ -0.45
COMMD4-203ENST00000480484 SKIV2LQ15477 1246 aaKnown RBP12.26□□□□□ -0.45
COMMD4-203ENST00000480484 ZSCAN20P17040 1043 aaPredicted RBP12.25□□□□□ -0.45
COMMD4-203ENST00000480484 ACEP12821 1306 aa12.25□□□□□ -0.45
COMMD4-203ENST00000480484 GPATCH11Q8N954 259 aa12.25□□□□□ -0.45
COMMD4-203ENST00000480484 PHRF1Q9P1Y6 1649 aaKnown RBP12.25□□□□□ -0.45
COMMD4-203ENST00000480484 DLG5Q8TDM6 1919 aa12.24□□□□□ -0.45
COMMD4-203ENST00000480484 MYRIPQ8NFW9 859 aa12.24□□□□□ -0.45
COMMD4-203ENST00000480484 PTPRUQ92729 1446 aa12.24□□□□□ -0.45
COMMD4-203ENST00000480484 TRPM3Q9HCF6 1732 aaPredicted RBP12.24□□□□□ -0.45
COMMD4-203ENST00000480484 F6X3S4 739 aa12.24□□□□□ -0.45
COMMD4-203ENST00000480484 PEX14O75381 377 aa12.24□□□□□ -0.45
COMMD4-203ENST00000480484 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
COMMD4-203ENST00000480484 USP26Q9BXU7 913 aa12.24□□□□□ -0.45
COMMD4-203ENST00000480484 TSPY26PQ9H489 355 aa12.24□□□□□ -0.45
COMMD4-203ENST00000480484 EIF4A2Q14240 407 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms