RNA–Protein interactions for RNA: ENST00000480226.5

ITGB1-212, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-212ENST00000480226 USP17L2Q6R6M4 530 aa9.18□□□□□ -0.94
ITGB1-212ENST00000480226 USP17L1Q7RTZ2 530 aa9.18□□□□□ -0.94
ITGB1-212ENST00000480226 PCDHGC4Q9Y5F7 938 aa9.18□□□□□ -0.94
ITGB1-212ENST00000480226 OIP5O43482 229 aa9.17□□□□□ -0.94
ITGB1-212ENST00000480226 BNIP3LO60238 219 aa9.17□□□□□ -0.94
ITGB1-212ENST00000480226 FGFR3P22607 806 aa9.17□□□□□ -0.94
ITGB1-212ENST00000480226 ZNF295-AS1Q8N0V1 137 aa9.17□□□□□ -0.94
ITGB1-212ENST00000480226 KLRG1Q96E93 195 aa9.17□□□□□ -0.94
ITGB1-212ENST00000480226 ABHD17AQ96GS6 310 aa9.17□□□□□ -0.94
ITGB1-212ENST00000480226 UCN2Q96RP3 112 aa9.17□□□□□ -0.94
ITGB1-212ENST00000480226 ZCCHC2Q9C0B9 1178 aaKnown RBP9.17□□□□□ -0.94
ITGB1-212ENST00000480226 NDFIP2Q9NV92 336 aa9.17□□□□□ -0.94
ITGB1-212ENST00000480226 SCHIP1Q9P0W5 487 aaPredicted RBP9.17□□□□□ -0.94
ITGB1-212ENST00000480226 GDF2Q9UK05 429 aaPredicted RBP9.17□□□□□ -0.94
ITGB1-212ENST00000480226 USP3Q9Y6I4 520 aa9.17□□□□□ -0.94
ITGB1-212ENST00000480226 A0A1W2PNR3 127 aa9.16□□□□□ -0.94
ITGB1-212ENST00000480226 BMP4P12644 408 aa9.16□□□□□ -0.94
ITGB1-212ENST00000480226 FNBP4Q8N3X1 1017 aaPredicted RBP9.16□□□□□ -0.94
ITGB1-212ENST00000480226 DNAAF2Q9NVR5 837 aaKnown RBP9.16□□□□□ -0.94
ITGB1-212ENST00000480226 ZBTB7BO15156 539 aaPredicted RBP9.15□□□□□ -0.94
ITGB1-212ENST00000480226 ATXN7O15265 892 aaPredicted RBP9.15□□□□□ -0.94
ITGB1-212ENST00000480226 CCDC102BQ68D86 513 aa9.15□□□□□ -0.94
ITGB1-212ENST00000480226 PODNQ7Z5L7 613 aa9.15□□□□□ -0.94
ITGB1-212ENST00000480226 BEND7Q8N7W2 519 aaPredicted RBP9.15□□□□□ -0.94
ITGB1-212ENST00000480226 TPCN2Q8NHX9 752 aa9.15□□□□□ -0.94
ITGB1-212ENST00000480226 MKRN1Q9UHC7 482 aaKnown RBP9.15□□□□□ -0.94
ITGB1-212ENST00000480226 GJA3Q9Y6H8 435 aa9.15□□□□□ -0.94
ITGB1-212ENST00000480226 PHF20L1A8MW92 1017 aa9.14□□□□□ -0.95
ITGB1-212ENST00000480226 TNS4Q8IZW8 715 aa9.14□□□□□ -0.95
ITGB1-212ENST00000480226 LARGE2Q8N3Y3 721 aa9.14□□□□□ -0.95
ITGB1-212ENST00000480226 KCTD17Q8N5Z5 321 aa9.14□□□□□ -0.95
ITGB1-212ENST00000480226 GOLGA6L1Q8N7Z2 621 aa9.14□□□□□ -0.95
ITGB1-212ENST00000480226 GLMNQ92990 594 aa9.14□□□□□ -0.95
ITGB1-212ENST00000480226 ZIC5Q96T25 663 aa9.14□□□□□ -0.95
ITGB1-212ENST00000480226 RBM19Q9Y4C8 960 aaKnown RBP9.14□□□□□ -0.95
ITGB1-212ENST00000480226 PARP3Q9Y6F1 533 aa9.14□□□□□ -0.95
ITGB1-212ENST00000480226 PALM3A6NDB9 673 aaPredicted RBP9.13□□□□□ -0.95
ITGB1-212ENST00000480226 A6NJR5 290 aa9.13□□□□□ -0.95
ITGB1-212ENST00000480226 FOXK2Q01167 660 aa9.13□□□□□ -0.95
ITGB1-212ENST00000480226 CTBSQ01459 385 aa9.13□□□□□ -0.95
ITGB1-212ENST00000480226 TEAD4Q15561 434 aa9.13□□□□□ -0.95
ITGB1-212ENST00000480226 BICDL1Q6ZP65 573 aa9.13□□□□□ -0.95
ITGB1-212ENST00000480226 SLC9A9Q8IVB4 645 aa9.13□□□□□ -0.95
ITGB1-212ENST00000480226 OGFOD1Q8N543 542 aa9.13□□□□□ -0.95
ITGB1-212ENST00000480226 GALNT6Q8NCL4 622 aa9.13□□□□□ -0.95
ITGB1-212ENST00000480226 L3MBTL2Q969R5 705 aa9.13□□□□□ -0.95
ITGB1-212ENST00000480226 NOS2P35228 1153 aa9.12□□□□□ -0.95
ITGB1-212ENST00000480226 EPHA4P54764 986 aa9.12□□□□□ -0.95
ITGB1-212ENST00000480226 CLDN10P78369 228 aa9.12□□□□□ -0.95
ITGB1-212ENST00000480226 ZNF232Q9UNY5 417 aa9.12□□□□□ -0.95
ITGB1-212ENST00000480226 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
ITGB1-212ENST00000480226 CNTNAP5Q8WYK1 1306 aa9.11□□□□□ -0.95
ITGB1-212ENST00000480226 C2CD2LO14523 706 aa9.11□□□□□ -0.95
ITGB1-212ENST00000480226 ZDHHC1Q8WTX9 485 aa9.11□□□□□ -0.95
ITGB1-212ENST00000480226 EDARADDQ8WWZ3 215 aa9.11□□□□□ -0.95
ITGB1-212ENST00000480226 TFIP11Q9UBB9 837 aaKnown RBP9.11□□□□□ -0.95
ITGB1-212ENST00000480226 M0R2N6 131 aa9.1□□□□□ -0.95
ITGB1-212ENST00000480226 KHNYNO15037 678 aaKnown RBP9.1□□□□□ -0.95
ITGB1-212ENST00000480226 MAPTP10636 758 aaKnown RBP9.1□□□□□ -0.95
ITGB1-212ENST00000480226 TXLNAP40222 546 aa9.1□□□□□ -0.95
ITGB1-212ENST00000480226 TNP2Q05952 138 aa9.1□□□□□ -0.95
ITGB1-212ENST00000480226 TBCELQ5QJ74 424 aa9.1□□□□□ -0.95
ITGB1-212ENST00000480226 CALR3Q96L12 384 aaKnown RBP9.1□□□□□ -0.95
ITGB1-212ENST00000480226 NEUROD4Q9HD90 331 aa9.1□□□□□ -0.95
ITGB1-212ENST00000480226 CHMP3Q9Y3E7 222 aa9.1□□□□□ -0.95
ITGB1-212ENST00000480226 DNMT3AQ9Y6K1 912 aaPredicted RBP9.1□□□□□ -0.95
ITGB1-212ENST00000480226 SERTM1A2A2V5 107 aa9.09□□□□□ -0.95
ITGB1-212ENST00000480226 DCDC2BA2VCK2 349 aa9.09□□□□□ -0.95
ITGB1-212ENST00000480226 ARAFP10398 606 aa9.09□□□□□ -0.95
ITGB1-212ENST00000480226 FAM182BQ5T319 152 aa9.09□□□□□ -0.95
ITGB1-212ENST00000480226 SAMD5Q5TGI4 173 aa9.09□□□□□ -0.95
ITGB1-212ENST00000480226 SIX5Q8N196 739 aa9.09□□□□□ -0.95
ITGB1-212ENST00000480226 GGA1Q9UJY5 639 aa9.09□□□□□ -0.95
ITGB1-212ENST00000480226 GPC6Q9Y625 555 aaPredicted RBP9.09□□□□□ -0.95
ITGB1-212ENST00000480226 SHISA8B8ZZ34 492 aa9.08□□□□□ -0.96
ITGB1-212ENST00000480226 EML1O00423 815 aa9.08□□□□□ -0.96
ITGB1-212ENST00000480226 FAM157BP0CG42 384 aa9.08□□□□□ -0.96
ITGB1-212ENST00000480226 RASA1P20936 1047 aa9.08□□□□□ -0.96
ITGB1-212ENST00000480226 PSMA6P60900 246 aaKnown RBP9.08□□□□□ -0.96
ITGB1-212ENST00000480226 SLCO4C1Q6ZQN7 724 aa9.08□□□□□ -0.96
ITGB1-212ENST00000480226 C1orf229Q6ZS94 237 aaPredicted RBP9.08□□□□□ -0.96
ITGB1-212ENST00000480226 ZNF594Q96JF6 807 aaPredicted RBP9.08□□□□□ -0.96
ITGB1-212ENST00000480226 MAFBQ9Y5Q3 323 aaPredicted RBP9.08□□□□□ -0.96
ITGB1-212ENST00000480226 RRAGCQ9HB90 399 aa9.07□□□□□ -0.96
ITGB1-212ENST00000480226 CD33P20138 364 aa9.06□□□□□ -0.96
ITGB1-212ENST00000480226 LAMC2Q13753 1193 aa9.06□□□□□ -0.96
ITGB1-212ENST00000480226 LARP1Q6PKG0 1096 aaKnown RBP9.06□□□□□ -0.96
ITGB1-212ENST00000480226 PPP1R12CQ9BZL4 782 aa9.06□□□□□ -0.96
ITGB1-212ENST00000480226 TSPAN10Q9H1Z9 355 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-212ENST00000480226 AVENQ9NQS1 362 aaPredicted RBP9.06□□□□□ -0.96
ITGB1-212ENST00000480226 MARK1Q9P0L2 795 aa9.06□□□□□ -0.96
ITGB1-212ENST00000480226 MKL2Q9ULH7 1088 aa9.06□□□□□ -0.96
ITGB1-212ENST00000480226 SFI1A8K8P3 1242 aa9.05□□□□□ -0.96
ITGB1-212ENST00000480226 AMPD1P23109 780 aa9.05□□□□□ -0.96
ITGB1-212ENST00000480226 C1orf53Q5VUE5 145 aa9.05□□□□□ -0.96
ITGB1-212ENST00000480226 LRRC69Q6ZNQ3 347 aa9.05□□□□□ -0.96
ITGB1-212ENST00000480226 TSEN2Q8NCE0 465 aaKnown RBP9.05□□□□□ -0.96
ITGB1-212ENST00000480226 RHPN1Q8TCX5 695 aa9.05□□□□□ -0.96
ITGB1-212ENST00000480226 NEURL1BA8MQ27 555 aa9.04□□□□□ -0.96
ITGB1-212ENST00000480226 IGHA1P01876 353 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms