RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 KCNQ4P56696 695 aa11.56□□□□□ -0.56
NUDCD3-208ENST00000480209 ITPK1Q13572 414 aa11.56□□□□□ -0.56
NUDCD3-208ENST00000480209 DNAJC10Q8IXB1 793 aa11.56□□□□□ -0.56
NUDCD3-208ENST00000480209 USP16Q9Y5T5 823 aa11.56□□□□□ -0.56
NUDCD3-208ENST00000480209 LOC102724428A0A0B4J2F2 783 aa11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 ANXA1P04083 346 aa11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 SNRPA1P09661 255 aaKnown RBP11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 PIP4K2AP48426 406 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 SIK1P57059 783 aa11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 PROSER3Q2NL68 480 aa11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 HDGFL1Q5TGJ6 251 aa11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 CHPF2Q9P2E5 772 aa11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 TNNQ9UQP3 1299 aa11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 SCN7AQ01118 1682 aa11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 RNF123Q5XPI4 1314 aa11.55□□□□□ -0.56
NUDCD3-208ENST00000480209 ANKRD36CQ5JPF3 1778 aa11.54□□□□□ -0.56
NUDCD3-208ENST00000480209 EIF2S2P20042 333 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-208ENST00000480209 G2E3Q7L622 706 aa11.54□□□□□ -0.56
NUDCD3-208ENST00000480209 MRPL50Q8N5N7 158 aaKnown RBP11.54□□□□□ -0.56
NUDCD3-208ENST00000480209 SMARCC1Q92922 1105 aaPredicted RBP11.54□□□□□ -0.56
NUDCD3-208ENST00000480209 SMC4Q9NTJ3 1288 aa11.54□□□□□ -0.56
NUDCD3-208ENST00000480209 AFDNP55196 1824 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-208ENST00000480209 NBPF26B4DH59 902 aa11.53□□□□□ -0.56
NUDCD3-208ENST00000480209 PDIA6Q15084 440 aa11.53□□□□□ -0.56
NUDCD3-208ENST00000480209 ALDH1L2Q3SY69 923 aa11.53□□□□□ -0.56
NUDCD3-208ENST00000480209 NBPF14Q5TI25 921 aa11.53□□□□□ -0.56
NUDCD3-208ENST00000480209 NBPF10Q6P3W6 841 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-208ENST00000480209 LRP10Q7Z4F1 713 aa11.53□□□□□ -0.56
NUDCD3-208ENST00000480209 VSIG10Q8N0Z9 540 aa11.53□□□□□ -0.56
NUDCD3-208ENST00000480209 NBPF15Q8N660 670 aa11.53□□□□□ -0.56
NUDCD3-208ENST00000480209 LINC00116Q8NCU8 138 aa11.53□□□□□ -0.56
NUDCD3-208ENST00000480209 SUPT16HQ9Y5B9 1047 aaKnown RBP11.53□□□□□ -0.56
NUDCD3-208ENST00000480209 QSER1Q2KHR3 1735 aa11.52□□□□□ -0.56
NUDCD3-208ENST00000480209 NUP98P52948 1817 aa11.52□□□□□ -0.57
NUDCD3-208ENST00000480209 PLIN1O60240 522 aa11.52□□□□□ -0.57
NUDCD3-208ENST00000480209 CYP19A1P11511 503 aaPredicted RBP11.52□□□□□ -0.57
NUDCD3-208ENST00000480209 ATP6V1AP38606 617 aa11.52□□□□□ -0.57
NUDCD3-208ENST00000480209 RRP1P56182 461 aaKnown RBP11.52□□□□□ -0.57
NUDCD3-208ENST00000480209 LRRC4BQ9NT99 713 aa11.52□□□□□ -0.57
NUDCD3-208ENST00000480209 A1BGP04217 495 aa11.51□□□□□ -0.57
NUDCD3-208ENST00000480209 CCDC30Q5VVM6 783 aa11.51□□□□□ -0.57
NUDCD3-208ENST00000480209 PROM2Q8N271 834 aa11.51□□□□□ -0.57
NUDCD3-208ENST00000480209 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
NUDCD3-208ENST00000480209 PHAXQ9H814 394 aaKnown RBP11.51□□□□□ -0.57
NUDCD3-208ENST00000480209 CCNL1Q9UK58 526 aaPredicted RBP11.51□□□□□ -0.57
NUDCD3-208ENST00000480209 ZBTB1Q9Y2K1 713 aa11.51□□□□□ -0.57
NUDCD3-208ENST00000480209 APBA3O96018 575 aa11.5□□□□□ -0.57
NUDCD3-208ENST00000480209 BRPF1P55201 1214 aaPredicted RBP11.5□□□□□ -0.57
NUDCD3-208ENST00000480209 C20orf194Q5TEA3 1177 aa11.5□□□□□ -0.57
NUDCD3-208ENST00000480209 INTS5Q6P9B9 1019 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-208ENST00000480209 FOXD4L1Q9NU39 408 aa11.5□□□□□ -0.57
NUDCD3-208ENST00000480209 NOB1Q9ULX3 412 aaKnown RBP11.5□□□□□ -0.57
NUDCD3-208ENST00000480209 PLSCR1O15162 318 aa11.49□□□□□ -0.57
NUDCD3-208ENST00000480209 SLC4A2P04920 1241 aa11.49□□□□□ -0.57
NUDCD3-208ENST00000480209 MYL6BP14649 208 aa11.49□□□□□ -0.57
NUDCD3-208ENST00000480209 CRKLP46109 303 aaKnown RBP11.49□□□□□ -0.57
NUDCD3-208ENST00000480209 AMIGO3Q86WK7 504 aa11.49□□□□□ -0.57
NUDCD3-208ENST00000480209 STK31Q9BXU1 1019 aa11.49□□□□□ -0.57
NUDCD3-208ENST00000480209 DDX21Q9NR30 783 aaKnown RBP eCLIP11.49□□□□□ -0.57
NUDCD3-208ENST00000480209 ERBB4Q15303 1308 aa11.49□□□□□ -0.57
NUDCD3-208ENST00000480209 KIF16BQ96L93 1317 aa11.49□□□□□ -0.57
NUDCD3-208ENST00000480209 ADCY9O60503 1353 aa11.49□□□□□ -0.57
NUDCD3-208ENST00000480209 CASZ1Q86V15 1759 aa11.49□□□□□ -0.57
NUDCD3-208ENST00000480209 RLBP1P12271 317 aa11.48□□□□□ -0.57
NUDCD3-208ENST00000480209 FLIIQ13045 1269 aa11.48□□□□□ -0.57
NUDCD3-208ENST00000480209 TXNRD1Q16881 649 aa11.48□□□□□ -0.57
NUDCD3-208ENST00000480209 ILDR2Q71H61 639 aa11.48□□□□□ -0.57
NUDCD3-208ENST00000480209 SMIM5Q71RC9 77 aa11.48□□□□□ -0.57
NUDCD3-208ENST00000480209 FRAT1Q92837 279 aaPredicted RBP11.48□□□□□ -0.57
NUDCD3-208ENST00000480209 CCDC87Q9NVE4 849 aa11.48□□□□□ -0.57
NUDCD3-208ENST00000480209 DBF4Q9UBU7 674 aaPredicted RBP11.48□□□□□ -0.57
NUDCD3-208ENST00000480209 CNTNAP4Q9C0A0 1308 aa11.48□□□□□ -0.57
NUDCD3-208ENST00000480209 PXDNLA1KZ92 1463 aa11.48□□□□□ -0.57
NUDCD3-208ENST00000480209 COL24A1Q17RW2 1714 aa11.47□□□□□ -0.57
NUDCD3-208ENST00000480209 ABCC4O15439 1325 aa11.47□□□□□ -0.57
NUDCD3-208ENST00000480209 STARD3NLO95772 234 aa11.47□□□□□ -0.57
NUDCD3-208ENST00000480209 TRIM27P14373 513 aa11.47□□□□□ -0.57
NUDCD3-208ENST00000480209 IRX6P78412 446 aaPredicted RBP11.47□□□□□ -0.57
NUDCD3-208ENST00000480209 EN1Q05925 392 aaPredicted RBP11.47□□□□□ -0.57
NUDCD3-208ENST00000480209 EZH2Q15910 746 aaKnown RBP11.47□□□□□ -0.57
NUDCD3-208ENST00000480209 DEFB132Q7Z7B7 95 aa11.47□□□□□ -0.57
NUDCD3-208ENST00000480209 CAMKK2Q96RR4 588 aa11.47□□□□□ -0.57
NUDCD3-208ENST00000480209 TEX13AQ9BXU3 409 aaPredicted RBP11.47□□□□□ -0.57
NUDCD3-208ENST00000480209 COL15A1P39059 1388 aa11.46□□□□□ -0.57
NUDCD3-208ENST00000480209 F6X3S4 739 aa11.46□□□□□ -0.57
NUDCD3-208ENST00000480209 CANXP27824 592 aaKnown RBP11.46□□□□□ -0.57
NUDCD3-208ENST00000480209 SLC27A3Q5K4L6 730 aa11.46□□□□□ -0.57
NUDCD3-208ENST00000480209 ZKSCAN2Q63HK3 967 aa11.46□□□□□ -0.57
NUDCD3-208ENST00000480209 TTLL7Q6ZT98 887 aa11.46□□□□□ -0.57
NUDCD3-208ENST00000480209 XAGE3Q8WTP9 111 aa11.46□□□□□ -0.57
NUDCD3-208ENST00000480209 HYPKQ9NX55 129 aa11.46□□□□□ -0.57
NUDCD3-208ENST00000480209 PTPRCP08575 1304 aa11.45□□□□□ -0.58
NUDCD3-208ENST00000480209 ZNF827Q17R98 1081 aa11.45□□□□□ -0.58
NUDCD3-208ENST00000480209 ATF7IPQ6VMQ6 1270 aa11.45□□□□□ -0.58
NUDCD3-208ENST00000480209 PANK1Q8TE04 598 aa11.45□□□□□ -0.58
NUDCD3-208ENST00000480209 CLUAP1Q96AJ1 413 aa11.45□□□□□ -0.58
NUDCD3-208ENST00000480209 EIF5P55010 431 aaKnown RBP11.44□□□□□ -0.58
NUDCD3-208ENST00000480209 AIMP1Q12904 312 aaKnown RBP11.44□□□□□ -0.58
NUDCD3-208ENST00000480209 FKBP5Q13451 457 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms