RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 UBR1Q8IWV7 1749 aa10.54□□□□□ -0.72
PKP4-210ENST00000480171 OFD1O75665 1012 aa10.54□□□□□ -0.72
PKP4-210ENST00000480171 PDLIM2Q96JY6 352 aa10.54□□□□□ -0.72
PKP4-210ENST00000480171 PNMA6EA0A0J9YXQ4 647 aa10.53□□□□□ -0.72
PKP4-210ENST00000480171 UBTFL1P0CB47 393 aaPredicted RBP10.53□□□□□ -0.72
PKP4-210ENST00000480171 TSHZ3Q63HK5 1081 aa10.53□□□□□ -0.72
PKP4-210ENST00000480171 CNPY4Q8N129 248 aa10.53□□□□□ -0.72
PKP4-210ENST00000480171 RAB11FIP3O75154 756 aa10.53□□□□□ -0.72
PKP4-210ENST00000480171 KIAA1211Q6ZU35 1233 aa10.53□□□□□ -0.72
PKP4-210ENST00000480171 TMEM63CQ9P1W3 806 aa10.53□□□□□ -0.72
PKP4-210ENST00000480171 NOL7Q9UMY1 257 aaKnown RBP10.53□□□□□ -0.72
PKP4-210ENST00000480171 LRRFIP2Q9Y608 721 aaKnown RBP10.53□□□□□ -0.72
PKP4-210ENST00000480171 EID1Q9Y6B2 187 aa10.53□□□□□ -0.72
PKP4-210ENST00000480171 SYCE3A1L190 88 aa10.52□□□□□ -0.73
PKP4-210ENST00000480171 PHF14O94880 888 aa10.52□□□□□ -0.73
PKP4-210ENST00000480171 MCM5P33992 734 aa10.52□□□□□ -0.73
PKP4-210ENST00000480171 IL17RAQ96F46 866 aa10.52□□□□□ -0.73
PKP4-210ENST00000480171 CACNA1FO60840 1977 aa10.52□□□□□ -0.73
PKP4-210ENST00000480171 PXDNLA1KZ92 1463 aa10.52□□□□□ -0.73
PKP4-210ENST00000480171 WDR33Q9C0J8 1336 aaKnown RBP10.52□□□□□ -0.73
PKP4-210ENST00000480171 TERF1P54274 439 aa10.52□□□□□ -0.73
PKP4-210ENST00000480171 CCDC39Q9UFE4 941 aa10.52□□□□□ -0.73
PKP4-210ENST00000480171 PTPRUQ92729 1446 aa10.52□□□□□ -0.73
PKP4-210ENST00000480171 RIMS1Q86UR5 1692 aaKnown RBP10.51□□□□□ -0.73
PKP4-210ENST00000480171 TAF7Q15545 349 aaPredicted RBP10.51□□□□□ -0.73
PKP4-210ENST00000480171 PALD1Q9ULE6 856 aa10.51□□□□□ -0.73
PKP4-210ENST00000480171 FAM208AQ9UK61 1670 aaKnown RBP10.51□□□□□ -0.73
PKP4-210ENST00000480171 CSPP1Q1MSJ5 1256 aa10.51□□□□□ -0.73
PKP4-210ENST00000480171 NOL8Q76FK4 1167 aaKnown RBP10.51□□□□□ -0.73
PKP4-210ENST00000480171 TSPY26PQ9H489 355 aa10.51□□□□□ -0.73
PKP4-210ENST00000480171 CEP170BQ9Y4F5 1589 aaPredicted RBP10.51□□□□□ -0.73
PKP4-210ENST00000480171 XRN1Q8IZH2 1706 aaKnown RBP10.51□□□□□ -0.73
PKP4-210ENST00000480171 MAP3K5Q99683 1374 aa10.51□□□□□ -0.73
PKP4-210ENST00000480171 TUBGCP6Q96RT7 1819 aa10.51□□□□□ -0.73
PKP4-210ENST00000480171 ZNF500O60304 480 aaPredicted RBP10.5□□□□□ -0.73
PKP4-210ENST00000480171 LRRC37A3O60309 1634 aa10.5□□□□□ -0.73
PKP4-210ENST00000480171 RAD21O60216 631 aa10.5□□□□□ -0.73
PKP4-210ENST00000480171 LTKP29376 864 aa10.5□□□□□ -0.73
PKP4-210ENST00000480171 NLRP6P59044 892 aa10.5□□□□□ -0.73
PKP4-210ENST00000480171 SSH3Q8TE77 659 aa10.5□□□□□ -0.73
PKP4-210ENST00000480171 SLC26A8Q96RN1 970 aa10.5□□□□□ -0.73
PKP4-210ENST00000480171 USP44Q9H0E7 712 aa10.5□□□□□ -0.73
PKP4-210ENST00000480171 MTMR7Q9Y216 660 aa10.5□□□□□ -0.73
PKP4-210ENST00000480171 AMOTL2Q9Y2J4 779 aa10.5□□□□□ -0.73
PKP4-210ENST00000480171 HSPA4P34932 840 aa10.49□□□□□ -0.73
PKP4-210ENST00000480171 HDGFL1Q5TGJ6 251 aa10.49□□□□□ -0.73
PKP4-210ENST00000480171 ZKSCAN5Q9Y2L8 839 aa10.49□□□□□ -0.73
PKP4-210ENST00000480171 SURF6O75683 361 aaKnown RBP10.49□□□□□ -0.73
PKP4-210ENST00000480171 UPF3BQ9BZI7 483 aaKnown RBP10.49□□□□□ -0.73
PKP4-210ENST00000480171 NSFL1CQ9UNZ2 370 aaKnown RBP10.49□□□□□ -0.73
PKP4-210ENST00000480171 N4BP2Q86UW6 1770 aaPredicted RBP10.49□□□□□ -0.73
PKP4-210ENST00000480171 HSP90AB4PQ58FF6 505 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 PIAS4Q8N2W9 510 aaPredicted RBP10.48□□□□□ -0.73
PKP4-210ENST00000480171 CHAMP1Q96JM3 812 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 IL1RAPL2Q9NP60 686 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 HOXC9P31274 260 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 NUTM1Q86Y26 1132 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 UNC5CLQ8IV45 518 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 CNTROBQ8N137 903 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 IL17REQ8NFR9 667 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 KIF1BPQ96EK5 621 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 PRDM16Q9HAZ2 1276 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 TBX22Q9Y458 520 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 PTMAP06454 111 aaKnown RBP10.48□□□□□ -0.73
PKP4-210ENST00000480171 PPP1R42Q7Z4L9 355 aa10.48□□□□□ -0.73
PKP4-210ENST00000480171 KCTD17Q8N5Z5 321 aa10.47□□□□□ -0.73
PKP4-210ENST00000480171 FAM184AQ8NB25 1140 aa10.47□□□□□ -0.73
PKP4-210ENST00000480171 RHPN1Q8TCX5 695 aa10.47□□□□□ -0.73
PKP4-210ENST00000480171 LETM1O95202 739 aaPredicted RBP10.47□□□□□ -0.73
PKP4-210ENST00000480171 POLA2Q14181 598 aa10.47□□□□□ -0.73
PKP4-210ENST00000480171 DIP2AQ14689 1571 aa10.47□□□□□ -0.73
PKP4-210ENST00000480171 RNF214Q8ND24 703 aa10.47□□□□□ -0.73
PKP4-210ENST00000480171 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.47□□□□□ -0.73
PKP4-210ENST00000480171 RAD50Q92878 1312 aa10.47□□□□□ -0.73
PKP4-210ENST00000480171 SGSM2O43147 1006 aa10.46□□□□□ -0.73
PKP4-210ENST00000480171 UVSSAQ2YD98 709 aa10.46□□□□□ -0.73
PKP4-210ENST00000480171 USP48Q86UV5 1035 aa10.46□□□□□ -0.73
PKP4-210ENST00000480171 PDCL3Q9H2J4 239 aa10.46□□□□□ -0.73
PKP4-210ENST00000480171 R3HCC1Q9Y3T6 440 aaKnown RBP10.46□□□□□ -0.73
PKP4-210ENST00000480171 ATP6V1DQ9Y5K8 247 aa10.46□□□□□ -0.73
PKP4-210ENST00000480171 PIK3C2AO00443 1686 aa10.46□□□□□ -0.73
PKP4-210ENST00000480171 SRGAP3O43295 1099 aa10.46□□□□□ -0.74
PKP4-210ENST00000480171 RUFY2Q8WXA3 655 aa10.46□□□□□ -0.74
PKP4-210ENST00000480171 LTV1Q96GA3 475 aaPredicted RBP10.46□□□□□ -0.74
PKP4-210ENST00000480171 ANKARQ7Z5J8 1434 aa10.45□□□□□ -0.74
PKP4-210ENST00000480171 HOXB7P09629 217 aa10.45□□□□□ -0.74
PKP4-210ENST00000480171 TMEM87AQ8NBN3 555 aa10.45□□□□□ -0.74
PKP4-210ENST00000480171 PI4K2BQ8TCG2 481 aa10.45□□□□□ -0.74
PKP4-210ENST00000480171 ZMYND15Q9H091 742 aa10.45□□□□□ -0.74
PKP4-210ENST00000480171 PHAXQ9H814 394 aaKnown RBP10.45□□□□□ -0.74
PKP4-210ENST00000480171 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.45□□□□□ -0.74
PKP4-210ENST00000480171 LIMCH1Q9UPQ0 1083 aa10.45□□□□□ -0.74
PKP4-210ENST00000480171 XPCQ01831 940 aaPredicted RBP10.45□□□□□ -0.74
PKP4-210ENST00000480171 OS9Q13438 667 aaPredicted RBP10.45□□□□□ -0.74
PKP4-210ENST00000480171 CCDC183Q5T5S1 534 aa10.45□□□□□ -0.74
PKP4-210ENST00000480171 FAM177A1Q8N128 213 aaPredicted RBP10.45□□□□□ -0.74
PKP4-210ENST00000480171 PSMD1Q99460 953 aa10.45□□□□□ -0.74
PKP4-210ENST00000480171 HDAC5Q9UQL6 1122 aa10.45□□□□□ -0.74
PKP4-210ENST00000480171 SNX14Q9Y5W7 946 aa10.45□□□□□ -0.74
PKP4-210ENST00000480171 MAP4K4O95819 1239 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms