RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 ARHGEF25Q86VW2 580 aa13.2□□□□□ -0.3
CHD6-208ENST00000480022 SPTLC3Q9NUV7 552 aa13.2□□□□□ -0.3
CHD6-208ENST00000480022 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
CHD6-208ENST00000480022 DNAJC2Q99543 621 aaKnown RBP13.19□□□□□ -0.3
CHD6-208ENST00000480022 DIAPH3Q9NSV4 1193 aa13.19□□□□□ -0.3
CHD6-208ENST00000480022 CPDO75976 1380 aa13.19□□□□□ -0.3
CHD6-208ENST00000480022 ABCA3Q99758 1704 aa13.19□□□□□ -0.3
CHD6-208ENST00000480022 CCDC66A2RUB6 948 aa13.19□□□□□ -0.3
CHD6-208ENST00000480022 MTHFSP49914 203 aa13.19□□□□□ -0.3
CHD6-208ENST00000480022 NUCB1Q02818 461 aa13.19□□□□□ -0.3
CHD6-208ENST00000480022 TSPY26PQ9H489 355 aa13.19□□□□□ -0.3
CHD6-208ENST00000480022 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
CHD6-208ENST00000480022 ADAMTS2O95450 1211 aa13.18□□□□□ -0.3
CHD6-208ENST00000480022 MBD3O95983 291 aa13.18□□□□□ -0.3
CHD6-208ENST00000480022 CHRM1P11229 460 aaPredicted RBP13.18□□□□□ -0.3
CHD6-208ENST00000480022 CHAF1AQ13111 956 aaPredicted RBP13.18□□□□□ -0.3
CHD6-208ENST00000480022 NEUROD2Q15784 382 aa13.18□□□□□ -0.3
CHD6-208ENST00000480022 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
CHD6-208ENST00000480022 CWC22Q9HCG8 908 aaKnown RBP13.18□□□□□ -0.3
CHD6-208ENST00000480022 LNPKQ9C0E8 428 aa13.17□□□□□ -0.3
CHD6-208ENST00000480022 AMPHP49418 695 aa13.17□□□□□ -0.3
CHD6-208ENST00000480022 PKP1Q13835 747 aa13.17□□□□□ -0.3
CHD6-208ENST00000480022 CHRNA2Q15822 529 aa13.17□□□□□ -0.3
CHD6-208ENST00000480022 PRDM11Q9NQV5 511 aa13.17□□□□□ -0.3
CHD6-208ENST00000480022 LRP6O75581 1613 aa13.17□□□□□ -0.3
CHD6-208ENST00000480022 FAM83GA6ND36 823 aa13.17□□□□□ -0.3
CHD6-208ENST00000480022 RABEP1Q15276 862 aa13.17□□□□□ -0.3
CHD6-208ENST00000480022 HOXC9P31274 260 aa13.16□□□□□ -0.3
CHD6-208ENST00000480022 TBC1D9Q6ZT07 1266 aa13.16□□□□□ -0.3
CHD6-208ENST00000480022 CHD1LQ86WJ1 897 aa13.16□□□□□ -0.3
CHD6-208ENST00000480022 ITPRIPQ8IWB1 547 aa13.16□□□□□ -0.3
CHD6-208ENST00000480022 C17orf53Q8N3J3 647 aaPredicted RBP13.16□□□□□ -0.3
CHD6-208ENST00000480022 IP6K1Q92551 441 aa13.16□□□□□ -0.3
CHD6-208ENST00000480022 NSFL1CQ9UNZ2 370 aaKnown RBP13.16□□□□□ -0.3
CHD6-208ENST00000480022 RIOK3O14730 519 aaKnown RBP13.15□□□□□ -0.3
CHD6-208ENST00000480022 CTIFO43310 598 aaKnown RBP13.15□□□□□ -0.3
CHD6-208ENST00000480022 SLFN14P0C7P3 912 aa13.15□□□□□ -0.3
CHD6-208ENST00000480022 ILDR1Q86SU0 546 aaPredicted RBP13.15□□□□□ -0.3
CHD6-208ENST00000480022 TIGD1Q96MW7 591 aa13.15□□□□□ -0.3
CHD6-208ENST00000480022 AXIN2Q9Y2T1 843 aa13.15□□□□□ -0.3
CHD6-208ENST00000480022 RRP7AQ9Y3A4 280 aaKnown RBP13.15□□□□□ -0.3
CHD6-208ENST00000480022 RTL1A6NKG5 1358 aa13.15□□□□□ -0.3
CHD6-208ENST00000480022 FLT4P35916 1363 aa13.15□□□□□ -0.3
CHD6-208ENST00000480022 KIF24Q5T7B8 1368 aa13.15□□□□□ -0.3
CHD6-208ENST00000480022 HSP90AB2PQ58FF8 381 aa13.15□□□□□ -0.3
CHD6-208ENST00000480022 MPNDQ8N594 471 aa13.15□□□□□ -0.3
CHD6-208ENST00000480022 PHF23Q9BUL5 403 aaPredicted RBP13.15□□□□□ -0.3
CHD6-208ENST00000480022 TTC12Q9H892 705 aaPredicted RBP13.15□□□□□ -0.3
CHD6-208ENST00000480022 PEAK1Q9H792 1746 aa13.14□□□□□ -0.31
CHD6-208ENST00000480022 CDK12Q9NYV4 1490 aaPredicted RBP13.14□□□□□ -0.31
CHD6-208ENST00000480022 UVSSAQ2YD98 709 aa13.14□□□□□ -0.31
CHD6-208ENST00000480022 RUNDC1Q96C34 613 aa13.14□□□□□ -0.31
CHD6-208ENST00000480022 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
CHD6-208ENST00000480022 SYAP1Q96A49 352 aaPredicted RBP13.13□□□□□ -0.31
CHD6-208ENST00000480022 TCP11L2Q8N4U5 519 aa13.13□□□□□ -0.31
CHD6-208ENST00000480022 FAM184AQ8NB25 1140 aa13.12□□□□□ -0.31
CHD6-208ENST00000480022 ZDHHC9Q9Y397 364 aa13.12□□□□□ -0.31
CHD6-208ENST00000480022 LTN1O94822 1766 aa13.12□□□□□ -0.31
CHD6-208ENST00000480022 TRIM27P14373 513 aa13.12□□□□□ -0.31
CHD6-208ENST00000480022 IRX3P78415 501 aaPredicted RBP13.12□□□□□ -0.31
CHD6-208ENST00000480022 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
CHD6-208ENST00000480022 C8orf37Q96NL8 207 aa13.12□□□□□ -0.31
CHD6-208ENST00000480022 CTNNA3Q9UI47 895 aa13.12□□□□□ -0.31
CHD6-208ENST00000480022 MAP2P11137 1827 aaKnown RBP13.12□□□□□ -0.31
CHD6-208ENST00000480022 MEX3CQ5U5Q3 659 aaKnown RBP13.12□□□□□ -0.31
CHD6-208ENST00000480022 CFAP53Q96M91 514 aa13.12□□□□□ -0.31
CHD6-208ENST00000480022 ABCC6O95255 1503 aa13.11□□□□□ -0.31
CHD6-208ENST00000480022 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
CHD6-208ENST00000480022 PHF14O94880 888 aa13.11□□□□□ -0.31
CHD6-208ENST00000480022 SMC4Q9NTJ3 1288 aa13.11□□□□□ -0.31
CHD6-208ENST00000480022 ZBTB40Q9NUA8 1239 aa13.11□□□□□ -0.31
CHD6-208ENST00000480022 BTG4Q9NY30 223 aa13.11□□□□□ -0.31
CHD6-208ENST00000480022 CAMTA1Q9Y6Y1 1673 aa13.11□□□□□ -0.31
CHD6-208ENST00000480022 COL18A1P39060 1754 aa13.11□□□□□ -0.31
CHD6-208ENST00000480022 CT47B1P0C2W7 299 aaPredicted RBP13.11□□□□□ -0.31
CHD6-208ENST00000480022 EIF4A2Q14240 407 aaKnown RBP13.11□□□□□ -0.31
CHD6-208ENST00000480022 SYCP1Q15431 976 aa13.11□□□□□ -0.31
CHD6-208ENST00000480022 SECISBP2LQ93073 1101 aaKnown RBP13.11□□□□□ -0.31
CHD6-208ENST00000480022 LTV1Q96GA3 475 aaPredicted RBP13.11□□□□□ -0.31
CHD6-208ENST00000480022 USP25Q9UHP3 1055 aa13.11□□□□□ -0.31
CHD6-208ENST00000480022 DDX41Q9UJV9 622 aaKnown RBP13.11□□□□□ -0.31
CHD6-208ENST00000480022 LMO7Q8WWI1 1683 aa13.1□□□□□ -0.31
CHD6-208ENST00000480022 CDC45O75419 566 aa13.1□□□□□ -0.31
CHD6-208ENST00000480022 TERF2Q15554 542 aa13.1□□□□□ -0.31
CHD6-208ENST00000480022 CCDC27Q2M243 656 aa13.1□□□□□ -0.31
CHD6-208ENST00000480022 NGLY1Q96IV0 654 aa13.1□□□□□ -0.31
CHD6-208ENST00000480022 CFAP44Q96MT7 982 aa13.1□□□□□ -0.31
CHD6-208ENST00000480022 CALCOCO1Q9P1Z2 691 aa13.1□□□□□ -0.31
CHD6-208ENST00000480022 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.1□□□□□ -0.31
CHD6-208ENST00000480022 ADCY5O95622 1261 aa13.1□□□□□ -0.31
CHD6-208ENST00000480022 ATF7IPQ6VMQ6 1270 aa13.1□□□□□ -0.31
CHD6-208ENST00000480022 ZGPATQ8N5A5 531 aaKnown RBP13.1□□□□□ -0.31
CHD6-208ENST00000480022 ANKRD24Q8TF21 1146 aa13.1□□□□□ -0.31
CHD6-208ENST00000480022 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
CHD6-208ENST00000480022 ERBB3P21860 1342 aa13.09□□□□□ -0.31
CHD6-208ENST00000480022 DIAPH1O60610 1272 aaKnown RBP13.09□□□□□ -0.31
CHD6-208ENST00000480022 IL13P35225 146 aa13.09□□□□□ -0.31
CHD6-208ENST00000480022 NCBP1Q09161 790 aaKnown RBP13.09□□□□□ -0.31
CHD6-208ENST00000480022 KIAA1524Q8TCG1 905 aa13.09□□□□□ -0.31
CHD6-208ENST00000480022 SLIT2O94813 1529 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms