RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 WASHC4Q2M389 1173 aa7.25□□□□□ -1.25
CPS1-207ENST00000479988 ARHGAP45Q92619 1136 aa7.25□□□□□ -1.25
CPS1-207ENST00000479988 GCC1Q96CN9 775 aa7.25□□□□□ -1.25
CPS1-207ENST00000479988 ERVV-2B6SEH9 535 aa7.25□□□□□ -1.25
CPS1-207ENST00000479988 DHX16O60231 1041 aaKnown RBP7.25□□□□□ -1.25
CPS1-207ENST00000479988 CCT4P50991 539 aaKnown RBP7.25□□□□□ -1.25
CPS1-207ENST00000479988 CCDC152Q4G0S7 254 aa7.25□□□□□ -1.25
CPS1-207ENST00000479988 HSCBQ8IWL3 235 aa7.25□□□□□ -1.25
CPS1-207ENST00000479988 MYD88Q99836 296 aa7.25□□□□□ -1.25
CPS1-207ENST00000479988 ZC3H12CQ9C0D7 883 aaKnown RBP7.25□□□□□ -1.25
CPS1-207ENST00000479988 ATP7BP35670 1465 aa7.25□□□□□ -1.25
CPS1-207ENST00000479988 NPM3O75607 178 aaKnown RBP7.25□□□□□ -1.25
CPS1-207ENST00000479988 MED14O60244 1454 aa7.25□□□□□ -1.25
CPS1-207ENST00000479988 ANKRD18BA2A2Z9 1011 aa7.25□□□□□ -1.25
CPS1-207ENST00000479988 R3HDM1Q15032 1099 aaKnown RBP7.25□□□□□ -1.25
CPS1-207ENST00000479988 CLASRPQ8N2M8 674 aaKnown RBP7.25□□□□□ -1.25
CPS1-207ENST00000479988 CNKSR2Q8WXI2 1034 aa7.25□□□□□ -1.25
CPS1-207ENST00000479988 TSR2Q969E8 191 aaKnown RBP7.25□□□□□ -1.25
CPS1-207ENST00000479988 CHAF1AQ13111 956 aaPredicted RBP7.24□□□□□ -1.25
CPS1-207ENST00000479988 VPS53Q5VIR6 699 aa7.24□□□□□ -1.25
CPS1-207ENST00000479988 SLF2Q8IX21 1173 aa7.24□□□□□ -1.25
CPS1-207ENST00000479988 UTP14AQ9BVJ6 771 aaKnown RBP7.24□□□□□ -1.25
CPS1-207ENST00000479988 TCEAL9Q9UHQ7 104 aa7.24□□□□□ -1.25
CPS1-207ENST00000479988 PDE6BP35913 854 aa7.24□□□□□ -1.25
CPS1-207ENST00000479988 IKQ13123 557 aaPredicted RBP7.24□□□□□ -1.25
CPS1-207ENST00000479988 GNL2Q13823 731 aaKnown RBP7.24□□□□□ -1.25
CPS1-207ENST00000479988 METTL24Q5JXM2 366 aa7.24□□□□□ -1.25
CPS1-207ENST00000479988 SOGA3Q5TF21 947 aa7.24□□□□□ -1.25
CPS1-207ENST00000479988 ERC1Q8IUD2 1116 aa7.24□□□□□ -1.25
CPS1-207ENST00000479988 CWC25Q9NXE8 425 aaPredicted RBP7.24□□□□□ -1.25
CPS1-207ENST00000479988 SUPT20HQ8NEM7 779 aa7.24□□□□□ -1.25
CPS1-207ENST00000479988 SSH1Q8WYL5 1049 aa7.24□□□□□ -1.25
CPS1-207ENST00000479988 NOB1Q9ULX3 412 aaKnown RBP7.24□□□□□ -1.25
CPS1-207ENST00000479988 PDZRN3Q9UPQ7 1066 aa7.24□□□□□ -1.25
CPS1-207ENST00000479988 SLC3A2P08195 630 aaKnown RBP7.24□□□□□ -1.25
CPS1-207ENST00000479988 RBM17Q96I25 401 aaKnown RBP7.24□□□□□ -1.25
CPS1-207ENST00000479988 NEXMIFQ5QGS0 1516 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 GOLGA6L22H0YM25 854 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 ERC2O15083 957 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 PTMSP20962 102 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 FRMPD1Q5SYB0 1578 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 THUMPD2Q9BTF0 503 aaKnown RBP7.23□□□□□ -1.25
CPS1-207ENST00000479988 GJA3Q9Y6H8 435 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 LOC102724428A0A0B4J2F2 783 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 SIK1P57059 783 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 PARP10Q53GL7 1025 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 TTC39AQ5SRH9 613 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 SYNE3Q6ZMZ3 975 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 ANKRD18AQ8IVF6 992 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.23□□□□□ -1.25
CPS1-207ENST00000479988 AATKQ6ZMQ8 1374 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 MAP3K5Q99683 1374 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 ADGRB1O14514 1584 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 RNMTO43148 476 aaKnown RBP7.23□□□□□ -1.25
CPS1-207ENST00000479988 IGSF3O75054 1194 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 SURF6O75683 361 aaKnown RBP7.23□□□□□ -1.25
CPS1-207ENST00000479988 ZBTB7AO95365 584 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 TRDNQ13061 729 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 AEBP1Q8IUX7 1158 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 DIAPH3Q9NSV4 1193 aa7.23□□□□□ -1.25
CPS1-207ENST00000479988 ANKRD13DQ6ZTN6 518 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 CNKSR1Q969H4 720 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 KDM2BQ8NHM5 1336 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 MYO3AQ8NEV4 1616 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 QRICH2Q9H0J4 1663 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 DCCP43146 1447 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 PTCH1Q13635 1447 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 MARCH6O60337 910 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 HDAC1Q13547 482 aaPredicted RBP7.22□□□□□ -1.25
CPS1-207ENST00000479988 LARGE2Q8N3Y3 721 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 DLC1Q96QB1 1528 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 ALDH1B1P30837 517 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 RUFY2Q8WXA3 655 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.22□□□□□ -1.25
CPS1-207ENST00000479988 ERBB3P21860 1342 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 GRIN3BO60391 1043 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 GNAI2P04899 355 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 SLC27A3Q5K4L6 730 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 ANKRD45Q5TZF3 282 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 SPINK5Q9NQ38 1064 aaPredicted RBP7.22□□□□□ -1.25
CPS1-207ENST00000479988 NSFL1CQ9UNZ2 370 aaKnown RBP7.22□□□□□ -1.25
CPS1-207ENST00000479988 USP6P35125 1406 aa7.22□□□□□ -1.25
CPS1-207ENST00000479988 PPLO60437 1756 aa7.21□□□□□ -1.25
CPS1-207ENST00000479988 RAI14Q9P0K7 980 aa7.21□□□□□ -1.25
CPS1-207ENST00000479988 AKAP17AQ02040 695 aaKnown RBP7.21□□□□□ -1.26
CPS1-207ENST00000479988 ZRSR1Q15695 479 aaKnown RBP7.21□□□□□ -1.26
CPS1-207ENST00000479988 TXNRD1Q16881 649 aa7.21□□□□□ -1.26
CPS1-207ENST00000479988 DNAJC10Q8IXB1 793 aa7.21□□□□□ -1.26
CPS1-207ENST00000479988 AKAP2Q9Y2D5 859 aa7.21□□□□□ -1.26
CPS1-207ENST00000479988 REREQ9P2R6 1566 aa7.21□□□□□ -1.26
CPS1-207ENST00000479988 SOS2Q07890 1332 aaPredicted RBP7.21□□□□□ -1.26
CPS1-207ENST00000479988 PRR36Q9H6K5 1346 aa7.21□□□□□ -1.26
CPS1-207ENST00000479988 CLSTN1O94985 981 aa7.21□□□□□ -1.26
CPS1-207ENST00000479988 MTHFSDQ2M296 383 aaKnown RBP7.21□□□□□ -1.26
CPS1-207ENST00000479988 LRP2BPQ9P2M1 347 aa7.21□□□□□ -1.26
CPS1-207ENST00000479988 ABCF2Q9UG63 623 aa7.21□□□□□ -1.26
CPS1-207ENST00000479988 ALKQ9UM73 1620 aa7.21□□□□□ -1.26
CPS1-207ENST00000479988 OVOS2A0A0G2JMS6 1433 aa7.21□□□□□ -1.26
CPS1-207ENST00000479988 OVOS2A0A0J9YW53 1432 aa7.21□□□□□ -1.26
CPS1-207ENST00000479988 OVOS2Q6IE36 1432 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms