RNA–Protein interactions for RNA: ENST00000479896.1

PTPRE-208, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 5,736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-208ENST00000479896 BAG3O95817 575 aa14.45□□□□□ -0.1
PTPRE-208ENST00000479896 FERMT2Q96AC1 680 aa14.45□□□□□ -0.1
PTPRE-208ENST00000479896 AMOTL2Q9Y2J4 779 aa14.45□□□□□ -0.1
PTPRE-208ENST00000479896 ARHGAP29Q52LW3 1261 aa14.45□□□□□ -0.1
PTPRE-208ENST00000479896 EXOC6BQ9Y2D4 811 aa14.45□□□□□ -0.1
PTPRE-208ENST00000479896 CCDC66A2RUB6 948 aa14.45□□□□□ -0.1
PTPRE-208ENST00000479896 PRPF40BQ6NWY9 871 aaKnown RBP14.45□□□□□ -0.1
PTPRE-208ENST00000479896 CACNA2D4Q7Z3S7 1137 aa14.45□□□□□ -0.1
PTPRE-208ENST00000479896 BOLA2Q9H3K6 86 aa14.45□□□□□ -0.1
PTPRE-208ENST00000479896 NLRP5P59047 1200 aa14.44□□□□□ -0.1
PTPRE-208ENST00000479896 GSTO1P78417 241 aa14.44□□□□□ -0.1
PTPRE-208ENST00000479896 KRT28Q7Z3Y7 464 aa14.44□□□□□ -0.1
PTPRE-208ENST00000479896 DNAAF4Q8WXU2 420 aa14.44□□□□□ -0.1
PTPRE-208ENST00000479896 CFAP100Q494V2 611 aa14.44□□□□□ -0.1
PTPRE-208ENST00000479896 LIG1P18858 919 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 FAM193AP78312 1265 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 TMEM57Q8N5G2 664 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 GOLGA8AA7E2F4 631 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 GOLGA8BA8MQT2 603 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 CETN1Q12798 172 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 STXBP4Q6ZWJ1 553 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 DBF4Q9UBU7 674 aaPredicted RBP14.43□□□□□ -0.1
PTPRE-208ENST00000479896 ABCC11Q96J66 1382 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 SUPT6HQ7KZ85 1726 aaKnown RBP14.43□□□□□ -0.1
PTPRE-208ENST00000479896 FOXO3O43524 673 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 KIF5BP33176 963 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 MAP3K11Q16584 847 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 C8orf76Q96K31 380 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 PLCD4Q9BRC7 762 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 ALDH1L2Q3SY69 923 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 IFNL2Q8IZJ0 200 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 TTC21AQ8NDW8 1320 aa14.43□□□□□ -0.1
PTPRE-208ENST00000479896 PDE4BQ07343 736 aa14.42□□□□□ -0.1
PTPRE-208ENST00000479896 IFIT3O14879 490 aaKnown RBP14.42□□□□□ -0.1
PTPRE-208ENST00000479896 GPTP24298 496 aa14.42□□□□□ -0.1
PTPRE-208ENST00000479896 CIZ1Q9ULV3 898 aaPredicted RBP14.42□□□□□ -0.1
PTPRE-208ENST00000479896 NESP48681 1621 aa14.42□□□□□ -0.1
PTPRE-208ENST00000479896 SH2B1Q9NRF2 756 aaPredicted RBP14.41□□□□□ -0.1
PTPRE-208ENST00000479896 HDAC9Q9UKV0 1011 aa14.41□□□□□ -0.1
PTPRE-208ENST00000479896 POLA1P09884 1462 aaPredicted RBP14.41□□□□□ -0.1
PTPRE-208ENST00000479896 TOPBP1Q92547 1522 aa14.41□□□□□ -0.1
PTPRE-208ENST00000479896 CCDC83Q8IWF9 413 aa14.41□□□□□ -0.1
PTPRE-208ENST00000479896 CALML4Q96GE6 196 aa14.41□□□□□ -0.1
PTPRE-208ENST00000479896 NME9Q86XW9 330 aa14.41□□□□□ -0.1
PTPRE-208ENST00000479896 KAT14Q9H8E8 782 aa14.41□□□□□ -0.1
PTPRE-208ENST00000479896 CWC25Q9NXE8 425 aaPredicted RBP14.41□□□□□ -0.1
PTPRE-208ENST00000479896 AKNAQ7Z591 1439 aa14.41□□□□□ -0.1
PTPRE-208ENST00000479896 WASLO00401 505 aaPredicted RBP14.4□□□□□ -0.1
PTPRE-208ENST00000479896 AMPD3Q01432 767 aa14.4□□□□□ -0.1
PTPRE-208ENST00000479896 TTC21BQ7Z4L5 1316 aa14.4□□□□□ -0.1
PTPRE-208ENST00000479896 ZBTB3Q9H5J0 574 aa14.4□□□□□ -0.1
PTPRE-208ENST00000479896 NBPF8Q3BBV2 869 aa14.4□□□□□ -0.1
PTPRE-208ENST00000479896 ADGRL1O94910 1474 aa14.4□□□□□ -0.1
PTPRE-208ENST00000479896 NAIPQ13075 1403 aa14.39□□□□□ -0.11
PTPRE-208ENST00000479896 CCDC8Q9H0W5 538 aaPredicted RBP14.39□□□□□ -0.11
PTPRE-208ENST00000479896 FAM135AQ9P2D6 1515 aa14.39□□□□□ -0.11
PTPRE-208ENST00000479896 STAMBPO95630 424 aa14.39□□□□□ -0.11
PTPRE-208ENST00000479896 PPP4R3BQ5MIZ7 849 aa14.39□□□□□ -0.11
PTPRE-208ENST00000479896 HOOK3Q86VS8 718 aa14.39□□□□□ -0.11
PTPRE-208ENST00000479896 ANO10Q9NW15 660 aa14.39□□□□□ -0.11
PTPRE-208ENST00000479896 NBPF6Q5VWK0 638 aa14.39□□□□□ -0.11
PTPRE-208ENST00000479896 FILIP1Q7Z7B0 1213 aa14.39□□□□□ -0.11
PTPRE-208ENST00000479896 CADPS2Q86UW7 1296 aa14.39□□□□□ -0.11
PTPRE-208ENST00000479896 NBPF5PQ86XG9 351 aaPredicted RBP14.39□□□□□ -0.11
PTPRE-208ENST00000479896 NBPF4Q96M43 638 aa14.39□□□□□ -0.11
PTPRE-208ENST00000479896 PABPN1LA6NDY0 278 aaKnown RBP14.38□□□□□ -0.11
PTPRE-208ENST00000479896 CTNNA2P26232 953 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 KLHL10Q6JEL2 608 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 PLEKHH1Q9ULM0 1364 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 CTNNBL1Q8WYA6 563 aaPredicted RBP14.38□□□□□ -0.11
PTPRE-208ENST00000479896 THUMPD2Q9BTF0 503 aaKnown RBP14.38□□□□□ -0.11
PTPRE-208ENST00000479896 SAMM50Q9Y512 469 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 ZSCAN12O43309 604 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 CCDC152Q4G0S7 254 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 CCDC178Q5BJE1 867 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 PYM1Q9BRP8 204 aaKnown RBP14.38□□□□□ -0.11
PTPRE-208ENST00000479896 LRRC27Q9C0I9 530 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 SCAND2PQ9GZW5 306 aaPredicted RBP14.38□□□□□ -0.11
PTPRE-208ENST00000479896 TCP11L1Q9NUJ3 509 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 COMMD10Q9Y6G5 202 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 TSPY2A6NKD2 308 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 CRNKL1Q9BZJ0 848 aaKnown RBP14.38□□□□□ -0.11
PTPRE-208ENST00000479896 MSH6P52701 1360 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 TRAF1Q13077 416 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 C16orf71Q8IYS4 520 aaPredicted RBP14.38□□□□□ -0.11
PTPRE-208ENST00000479896 FERMT1Q9BQL6 677 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 GBP3Q9H0R5 595 aa14.38□□□□□ -0.11
PTPRE-208ENST00000479896 TOM1O60784 492 aa14.37□□□□□ -0.11
PTPRE-208ENST00000479896 SLFN5Q08AF3 891 aa14.37□□□□□ -0.11
PTPRE-208ENST00000479896 LDHAL6AQ6ZMR3 332 aa14.37□□□□□ -0.11
PTPRE-208ENST00000479896 GSTTP1A0A1W2PQM5 241 aa14.37□□□□□ -0.11
PTPRE-208ENST00000479896 SMARCA5O60264 1052 aaPredicted RBP14.37□□□□□ -0.11
PTPRE-208ENST00000479896 CA8P35219 290 aa14.37□□□□□ -0.11
PTPRE-208ENST00000479896 TAF3Q5VWG9 929 aa14.37□□□□□ -0.11
PTPRE-208ENST00000479896 UQCRFS1P1P0C7P4 283 aa14.37□□□□□ -0.11
PTPRE-208ENST00000479896 EVI5LQ96CN4 794 aa14.37□□□□□ -0.11
PTPRE-208ENST00000479896 PTPRCP08575 1304 aa14.37□□□□□ -0.11
PTPRE-208ENST00000479896 USO1O60763 962 aaKnown RBP14.37□□□□□ -0.11
PTPRE-208ENST00000479896 CCDC82Q8N4S0 544 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms