RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
RAPGEF3-209ENST00000479866 IPO4Q8TEX9 1081 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-209ENST00000479866 DDRGK1Q96HY6 314 aa14.09□□□□□ -0.15
RAPGEF3-209ENST00000479866 KIF20BQ96Q89 1820 aa14.09□□□□□ -0.15
RAPGEF3-209ENST00000479866 USP16Q9Y5T5 823 aa14.09□□□□□ -0.15
RAPGEF3-209ENST00000479866 SSH2Q76I76 1423 aa14.09□□□□□ -0.15
RAPGEF3-209ENST00000479866 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.15
RAPGEF3-209ENST00000479866 TSHZ3Q63HK5 1081 aa14.08□□□□□ -0.16
RAPGEF3-209ENST00000479866 WDR17Q8IZU2 1322 aa14.08□□□□□ -0.16
RAPGEF3-209ENST00000479866 GCC1Q96CN9 775 aa14.08□□□□□ -0.16
RAPGEF3-209ENST00000479866 IQSEC2Q5JU85 1478 aa14.08□□□□□ -0.16
RAPGEF3-209ENST00000479866 FAM98CQ17RN3 349 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-209ENST00000479866 HDAC5Q9UQL6 1122 aa14.08□□□□□ -0.16
RAPGEF3-209ENST00000479866 PROSER3Q2NL68 480 aa14.08□□□□□ -0.16
RAPGEF3-209ENST00000479866 PCDH11XQ9BZA7 1347 aa14.07□□□□□ -0.16
RAPGEF3-209ENST00000479866 PCDH11YQ9BZA8 1340 aa14.07□□□□□ -0.16
RAPGEF3-209ENST00000479866 RPAP2Q8IXW5 612 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-209ENST00000479866 G3BP1Q13283 466 aaKnown RBP eCLIP14.07□□□□□ -0.16
RAPGEF3-209ENST00000479866 BECN1Q14457 450 aa14.07□□□□□ -0.16
RAPGEF3-209ENST00000479866 SLKQ9H2G2 1235 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-209ENST00000479866 HYPKQ9NX55 129 aa14.07□□□□□ -0.16
RAPGEF3-209ENST00000479866 USP32Q8NFA0 1604 aa14.07□□□□□ -0.16
RAPGEF3-209ENST00000479866 MAP4K4O95819 1239 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-209ENST00000479866 A1BGP04217 495 aa14.07□□□□□ -0.16
RAPGEF3-209ENST00000479866 C16orf71Q8IYS4 520 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-209ENST00000479866 GIGYF1O75420 1035 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF3-209ENST00000479866 GPTP24298 496 aa14.06□□□□□ -0.16
RAPGEF3-209ENST00000479866 FAM182BQ5T319 152 aa14.06□□□□□ -0.16
RAPGEF3-209ENST00000479866 FAM43AQ8N2R8 423 aa14.06□□□□□ -0.16
RAPGEF3-209ENST00000479866 IPO9Q96P70 1041 aaKnown RBP14.06□□□□□ -0.16
RAPGEF3-209ENST00000479866 KCNJ4P48050 445 aa14.05□□□□□ -0.16
RAPGEF3-209ENST00000479866 PRIM1P49642 420 aaKnown RBP14.05□□□□□ -0.16
RAPGEF3-209ENST00000479866 ANKRD13DQ6ZTN6 518 aa14.05□□□□□ -0.16
RAPGEF3-209ENST00000479866 SETD1AO15047 1707 aaKnown RBP14.05□□□□□ -0.16
RAPGEF3-209ENST00000479866 GORABQ5T7V8 394 aa14.05□□□□□ -0.16
RAPGEF3-209ENST00000479866 SECISBP2LQ93073 1101 aaKnown RBP14.05□□□□□ -0.16
RAPGEF3-209ENST00000479866 NUTM1Q86Y26 1132 aa14.05□□□□□ -0.16
RAPGEF3-209ENST00000479866 KDRP35968 1356 aa14.05□□□□□ -0.16
RAPGEF3-209ENST00000479866 KDM2BQ8NHM5 1336 aa14.04□□□□□ -0.16
RAPGEF3-209ENST00000479866 STARD3NLO95772 234 aa14.04□□□□□ -0.16
RAPGEF3-209ENST00000479866 KIF6Q6ZMV9 814 aa14.04□□□□□ -0.16
RAPGEF3-209ENST00000479866 UBE3BQ7Z3V4 1068 aa14.04□□□□□ -0.16
RAPGEF3-209ENST00000479866 PPP1R42Q7Z4L9 355 aa14.04□□□□□ -0.16
RAPGEF3-209ENST00000479866 CARD10Q9BWT7 1032 aa14.04□□□□□ -0.16
RAPGEF3-209ENST00000479866 IFIT2P09913 472 aaKnown RBP14.04□□□□□ -0.16
RAPGEF3-209ENST00000479866 A0A087WZG4 1122 aa14.04□□□□□ -0.16
RAPGEF3-209ENST00000479866 KNDC1Q76NI1 1749 aa14.04□□□□□ -0.16
RAPGEF3-209ENST00000479866 NEUROD6Q96NK8 337 aa14.03□□□□□ -0.16
RAPGEF3-209ENST00000479866 LRRCC1Q9C099 1032 aa14.03□□□□□ -0.16
RAPGEF3-209ENST00000479866 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
RAPGEF3-209ENST00000479866 SOS2Q07890 1332 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF3-209ENST00000479866 NBPF7P0C2Y1 421 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF3-209ENST00000479866 HDAC1Q13547 482 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF3-209ENST00000479866 BICDL1Q6ZP65 573 aa14.03□□□□□ -0.16
RAPGEF3-209ENST00000479866 ZNF526Q8TF50 670 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF3-209ENST00000479866 INTS3Q68E01 1043 aaKnown RBP14.02□□□□□ -0.16
RAPGEF3-209ENST00000479866 CEP85Q6P2H3 762 aa14.02□□□□□ -0.16
RAPGEF3-209ENST00000479866 KSR2Q6VAB6 950 aa14.02□□□□□ -0.16
RAPGEF3-209ENST00000479866 NOL8Q76FK4 1167 aaKnown RBP14.02□□□□□ -0.16
RAPGEF3-209ENST00000479866 DDX21Q9NR30 783 aaKnown RBP eCLIP14.02□□□□□ -0.16
RAPGEF3-209ENST00000479866 ASAP1Q9ULH1 1129 aa14.02□□□□□ -0.17
RAPGEF3-209ENST00000479866 DNAJC10Q8IXB1 793 aa14.01□□□□□ -0.17
RAPGEF3-209ENST00000479866 ANKRD44Q8N8A2 993 aa14.01□□□□□ -0.17
RAPGEF3-209ENST00000479866 ADGRB2O60241 1585 aa14.01□□□□□ -0.17
RAPGEF3-209ENST00000479866 CLASRPQ8N2M8 674 aaKnown RBP14.01□□□□□ -0.17
RAPGEF3-209ENST00000479866 TBC1D2BQ9UPU7 963 aa14.01□□□□□ -0.17
RAPGEF3-209ENST00000479866 PA2G4Q9UQ80 394 aaKnown RBP14.01□□□□□ -0.17
RAPGEF3-209ENST00000479866 SHPRHQ149N8 1683 aa14.01□□□□□ -0.17
RAPGEF3-209ENST00000479866 ABCC4O15439 1325 aa14.01□□□□□ -0.17
RAPGEF3-209ENST00000479866 XRN1Q8IZH2 1706 aaKnown RBP14□□□□□ -0.17
RAPGEF3-209ENST00000479866 CRB1P82279 1406 aa14□□□□□ -0.17
RAPGEF3-209ENST00000479866 OTUD7AQ8TE49 926 aaPredicted RBP14□□□□□ -0.17
RAPGEF3-209ENST00000479866 PNMA6EA0A0J9YXQ4 647 aa13.99□□□□□ -0.17
RAPGEF3-209ENST00000479866 KCNQ4P56696 695 aa13.99□□□□□ -0.17
RAPGEF3-209ENST00000479866 GPATCH3Q96I76 525 aa13.99□□□□□ -0.17
RAPGEF3-209ENST00000479866 NALCNQ8IZF0 1738 aa13.99□□□□□ -0.17
RAPGEF3-209ENST00000479866 BABAM1Q9NWV8 329 aa13.99□□□□□ -0.17
RAPGEF3-209ENST00000479866 TAOK2Q9UL54 1235 aa13.99□□□□□ -0.17
RAPGEF3-209ENST00000479866 ATP6V1AP38606 617 aa13.99□□□□□ -0.17
RAPGEF3-209ENST00000479866 CHD2O14647 1828 aaKnown RBP13.99□□□□□ -0.17
RAPGEF3-209ENST00000479866 NUCB1Q02818 461 aa13.98□□□□□ -0.17
RAPGEF3-209ENST00000479866 KIAA1211Q6ZU35 1233 aa13.98□□□□□ -0.17
RAPGEF3-209ENST00000479866 USP21Q9UK80 565 aa13.98□□□□□ -0.17
RAPGEF3-209ENST00000479866 SMC5Q8IY18 1101 aa13.98□□□□□ -0.17
RAPGEF3-209ENST00000479866 C22orf23Q9BZE7 217 aa13.98□□□□□ -0.17
RAPGEF3-209ENST00000479866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.17
RAPGEF3-209ENST00000479866 HSCBQ8IWL3 235 aa13.98□□□□□ -0.17
RAPGEF3-209ENST00000479866 ANO2Q9NQ90 1003 aa13.98□□□□□ -0.17
RAPGEF3-209ENST00000479866 GRM8O00222 908 aa13.97□□□□□ -0.17
RAPGEF3-209ENST00000479866 KLHDC4Q8TBB5 520 aa13.97□□□□□ -0.17
RAPGEF3-209ENST00000479866 USP44Q9H0E7 712 aa13.97□□□□□ -0.17
RAPGEF3-209ENST00000479866 MON2Q7Z3U7 1717 aa13.97□□□□□ -0.17
RAPGEF3-209ENST00000479866 SEC24BO95487 1268 aa13.97□□□□□ -0.17
RAPGEF3-209ENST00000479866 HSP90AB4PQ58FF6 505 aa13.97□□□□□ -0.17
RAPGEF3-209ENST00000479866 CCDC8Q9H0W5 538 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF3-209ENST00000479866 TTLL7Q6ZT98 887 aa13.97□□□□□ -0.17
RAPGEF3-209ENST00000479866 AACSQ86V21 672 aa13.97□□□□□ -0.17
RAPGEF3-209ENST00000479866 FMN2Q9NZ56 1722 aa13.97□□□□□ -0.17
RAPGEF3-209ENST00000479866 DCCP43146 1447 aa13.97□□□□□ -0.17
RAPGEF3-209ENST00000479866 HSP90B1P14625 803 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms