RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 GABPB1Q06547 395 aaPredicted RBP15.54■□□□□ 0.08
LYSMD4-206ENST00000479791 IL25Q9H293 177 aa15.54■□□□□ 0.08
LYSMD4-206ENST00000479791 RUFY3Q7L099 469 aa15.53■□□□□ 0.08
LYSMD4-206ENST00000479791 G2E3Q7L622 706 aa15.53■□□□□ 0.08
LYSMD4-206ENST00000479791 ZRANB1Q9UGI0 708 aa15.53■□□□□ 0.08
LYSMD4-206ENST00000479791 PNMA6EA0A0J9YXQ4 647 aa15.53■□□□□ 0.08
LYSMD4-206ENST00000479791 SULT6B1Q6IMI4 303 aa15.53■□□□□ 0.08
LYSMD4-206ENST00000479791 AEBP1Q8IUX7 1158 aa15.53■□□□□ 0.08
LYSMD4-206ENST00000479791 SGSM2O43147 1006 aa15.52■□□□□ 0.08
LYSMD4-206ENST00000479791 RTF1Q92541 710 aaKnown RBP15.52■□□□□ 0.08
LYSMD4-206ENST00000479791 CTNNA3Q9UI47 895 aa15.52■□□□□ 0.08
LYSMD4-206ENST00000479791 CGNQ9P2M7 1197 aaKnown RBP15.52■□□□□ 0.07
LYSMD4-206ENST00000479791 PAXBP1Q9Y5B6 917 aa15.52■□□□□ 0.07
LYSMD4-206ENST00000479791 PTGS1P23219 599 aa15.52■□□□□ 0.07
LYSMD4-206ENST00000479791 DNM1Q05193 864 aaKnown RBP15.52■□□□□ 0.07
LYSMD4-206ENST00000479791 MTMR6Q9Y217 621 aa15.51■□□□□ 0.07
LYSMD4-206ENST00000479791 PDIA4P13667 645 aaKnown RBP15.51■□□□□ 0.07
LYSMD4-206ENST00000479791 EIF4A2Q14240 407 aaKnown RBP15.51■□□□□ 0.07
LYSMD4-206ENST00000479791 TPRNQ4KMQ1 711 aa15.51■□□□□ 0.07
LYSMD4-206ENST00000479791 WAPLQ7Z5K2 1190 aa15.5■□□□□ 0.07
LYSMD4-206ENST00000479791 LSG1Q9H089 658 aaKnown RBP15.5■□□□□ 0.07
LYSMD4-206ENST00000479791 DDX41Q9UJV9 622 aaKnown RBP15.5■□□□□ 0.07
LYSMD4-206ENST00000479791 PREX1Q8TCU6 1659 aa15.5■□□□□ 0.07
LYSMD4-206ENST00000479791 FGD1P98174 961 aa15.5■□□□□ 0.07
LYSMD4-206ENST00000479791 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.5■□□□□ 0.07
LYSMD4-206ENST00000479791 MAP3K11Q16584 847 aa15.49■□□□□ 0.07
LYSMD4-206ENST00000479791 CPS1P31327 1500 aa15.49■□□□□ 0.07
LYSMD4-206ENST00000479791 GJB2P29033 226 aa15.49■□□□□ 0.07
LYSMD4-206ENST00000479791 ZSCAN31Q96LW9 406 aaPredicted RBP15.49■□□□□ 0.07
LYSMD4-206ENST00000479791 SH2B1Q9NRF2 756 aaPredicted RBP15.49■□□□□ 0.07
LYSMD4-206ENST00000479791 WASLO00401 505 aaPredicted RBP15.49■□□□□ 0.07
LYSMD4-206ENST00000479791 ZNF771Q7L3S4 317 aaPredicted RBP15.49■□□□□ 0.07
LYSMD4-206ENST00000479791 RASEFQ8IZ41 740 aa15.49■□□□□ 0.07
LYSMD4-206ENST00000479791 HYPKQ9NX55 129 aa15.49■□□□□ 0.07
LYSMD4-206ENST00000479791 MRVI1Q9Y6F6 885 aa15.49■□□□□ 0.07
LYSMD4-206ENST00000479791 MORC2Q9Y6X9 1032 aaPredicted RBP15.49■□□□□ 0.07
LYSMD4-206ENST00000479791 MON2Q7Z3U7 1717 aa15.48■□□□□ 0.07
LYSMD4-206ENST00000479791 RAB11FIP3O75154 756 aa15.48■□□□□ 0.07
LYSMD4-206ENST00000479791 TYRO3Q06418 890 aa15.48■□□□□ 0.07
LYSMD4-206ENST00000479791 CCDC186Q7Z3E2 898 aa15.48■□□□□ 0.07
LYSMD4-206ENST00000479791 STK31Q9BXU1 1019 aa15.48■□□□□ 0.07
LYSMD4-206ENST00000479791 ELP1O95163 1332 aa15.48■□□□□ 0.07
LYSMD4-206ENST00000479791 SOS1Q07889 1333 aaPredicted RBP15.48■□□□□ 0.07
LYSMD4-206ENST00000479791 NUP62CLQ9H1M0 184 aa15.48■□□□□ 0.07
LYSMD4-206ENST00000479791 CCDC171Q6TFL3 1326 aa15.47■□□□□ 0.07
LYSMD4-206ENST00000479791 TNNT1P13805 278 aa15.47■□□□□ 0.07
LYSMD4-206ENST00000479791 VPS53Q5VIR6 699 aa15.47■□□□□ 0.07
LYSMD4-206ENST00000479791 TSPYL4Q9UJ04 414 aa15.47■□□□□ 0.07
LYSMD4-206ENST00000479791 PLA2G4DQ86XP0 818 aa15.47■□□□□ 0.07
LYSMD4-206ENST00000479791 CCDC112Q8NEF3 446 aa15.47■□□□□ 0.07
LYSMD4-206ENST00000479791 PI4K2BQ8TCG2 481 aa15.47■□□□□ 0.07
LYSMD4-206ENST00000479791 C16orf45Q96MC5 204 aaPredicted RBP15.47■□□□□ 0.07
LYSMD4-206ENST00000479791 DIP2CQ9Y2E4 1556 aa15.47■□□□□ 0.07
LYSMD4-206ENST00000479791 ZSCAN25Q6NSZ9 544 aa15.46■□□□□ 0.07
LYSMD4-206ENST00000479791 C3P01024 1663 aa15.46■□□□□ 0.07
LYSMD4-206ENST00000479791 KRT85P78386 507 aa15.46■□□□□ 0.07
LYSMD4-206ENST00000479791 FLIIQ13045 1269 aa15.46■□□□□ 0.07
LYSMD4-206ENST00000479791 LUZP1Q86V48 1076 aa15.46■□□□□ 0.07
LYSMD4-206ENST00000479791 CCDC83Q8IWF9 413 aa15.46■□□□□ 0.07
LYSMD4-206ENST00000479791 CNTROBQ8N137 903 aa15.46■□□□□ 0.07
LYSMD4-206ENST00000479791 SSH3Q8TE77 659 aa15.46■□□□□ 0.07
LYSMD4-206ENST00000479791 LRRFIP2Q9Y608 721 aaKnown RBP15.46■□□□□ 0.07
LYSMD4-206ENST00000479791 IGSF3O75054 1194 aa15.46■□□□□ 0.06
LYSMD4-206ENST00000479791 LARGE1O95461 756 aa15.46■□□□□ 0.06
LYSMD4-206ENST00000479791 CASTP20810 708 aaKnown RBP15.46■□□□□ 0.06
LYSMD4-206ENST00000479791 TM6SF1Q9BZW5 370 aa15.46■□□□□ 0.06
LYSMD4-206ENST00000479791 SLFN14P0C7P3 912 aa15.45■□□□□ 0.06
LYSMD4-206ENST00000479791 ZNF75DP51815 510 aa15.45■□□□□ 0.06
LYSMD4-206ENST00000479791 LARP6Q9BRS8 491 aaKnown RBP15.45■□□□□ 0.06
LYSMD4-206ENST00000479791 IL1RAPL2Q9NP60 686 aa15.45■□□□□ 0.06
LYSMD4-206ENST00000479791 MIS18AQ9NYP9 233 aa15.45■□□□□ 0.06
LYSMD4-206ENST00000479791 XRN1Q8IZH2 1706 aaKnown RBP15.45■□□□□ 0.06
LYSMD4-206ENST00000479791 LRMPQ12912 555 aa15.45■□□□□ 0.06
LYSMD4-206ENST00000479791 TDRD7Q8NHU6 1098 aaKnown RBP15.45■□□□□ 0.06
LYSMD4-206ENST00000479791 CBX8Q9HC52 389 aa15.45■□□□□ 0.06
LYSMD4-206ENST00000479791 CCDC61Q9Y6R9 512 aa15.45■□□□□ 0.06
LYSMD4-206ENST00000479791 RIMBP3CA6NJZ7 1639 aa15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 RIMBP3BA6NNM3 1639 aa15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 RIMBP3Q9UFD9 1639 aa15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 RBM43Q6ZSC3 357 aaKnown RBP15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 TTC6Q86TZ1 520 aa15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 NUTM1Q86Y26 1132 aa15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 DRC7Q8IY82 874 aa15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 KIF18AQ8NI77 898 aa15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 CCDC30Q5VVM6 783 aa15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 NUDT16Q96DE0 195 aaKnown RBP15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 PDRG1Q9NUG6 133 aa15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 PXDNLA1KZ92 1463 aa15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 RGPD1P0DJD0 1748 aa15.44■□□□□ 0.06
LYSMD4-206ENST00000479791 VPS37CA5D8V6 355 aaPredicted RBP15.43■□□□□ 0.06
LYSMD4-206ENST00000479791 KCNB2Q92953 911 aa15.43■□□□□ 0.06
LYSMD4-206ENST00000479791 TRIM5Q9C035 493 aa15.43■□□□□ 0.06
LYSMD4-206ENST00000479791 TNMDQ9H2S6 317 aa15.43■□□□□ 0.06
LYSMD4-206ENST00000479791 ZSWIM6Q9HCJ5 1215 aa15.43■□□□□ 0.06
LYSMD4-206ENST00000479791 DDX19AQ9NUU7 478 aaKnown RBP15.43■□□□□ 0.06
LYSMD4-206ENST00000479791 ANO6Q4KMQ2 910 aa15.43■□□□□ 0.06
LYSMD4-206ENST00000479791 N4BP2Q86UW6 1770 aaPredicted RBP15.43■□□□□ 0.06
LYSMD4-206ENST00000479791 LIG1P18858 919 aa15.43■□□□□ 0.06
LYSMD4-206ENST00000479791 CDC25BP30305 580 aa15.43■□□□□ 0.06
LYSMD4-206ENST00000479791 USP44Q9H0E7 712 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms