RNA–Protein interactions for RNA: ENST00000479362.1

CDK11A-216, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-216ENST00000479362 C4AP0C0L4 1744 aa13.75□□□□□ -0.21
CDK11A-216ENST00000479362 KCNA3P22001 575 aa13.74□□□□□ -0.21
CDK11A-216ENST00000479362 HMGB2P26583 209 aaKnown RBP13.74□□□□□ -0.21
CDK11A-216ENST00000479362 NBPF6Q5VWK0 638 aa13.74□□□□□ -0.21
CDK11A-216ENST00000479362 AEBP1Q8IUX7 1158 aa13.74□□□□□ -0.21
CDK11A-216ENST00000479362 NBPF4Q96M43 638 aa13.74□□□□□ -0.21
CDK11A-216ENST00000479362 RSPH6AQ9H0K4 717 aa13.74□□□□□ -0.21
CDK11A-216ENST00000479362 CCDC146Q8IYE0 955 aa13.73□□□□□ -0.21
CDK11A-216ENST00000479362 ABHD8Q96I13 439 aa13.73□□□□□ -0.21
CDK11A-216ENST00000479362 PNNQ9H307 717 aaKnown RBP13.73□□□□□ -0.21
CDK11A-216ENST00000479362 MAPK8IP3Q9UPT6 1336 aa13.72□□□□□ -0.21
CDK11A-216ENST00000479362 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
CDK11A-216ENST00000479362 MLLT1Q03111 559 aaPredicted RBP13.72□□□□□ -0.21
CDK11A-216ENST00000479362 DCAF5Q96JK2 942 aa13.72□□□□□ -0.21
CDK11A-216ENST00000479362 TIAM2Q8IVF5 1701 aa13.72□□□□□ -0.21
CDK11A-216ENST00000479362 DLG5Q8TDM6 1919 aa13.72□□□□□ -0.21
CDK11A-216ENST00000479362 NEFMP07197 916 aa13.71□□□□□ -0.21
CDK11A-216ENST00000479362 LINC00116Q8NCU8 138 aa13.71□□□□□ -0.21
CDK11A-216ENST00000479362 RUNDC1Q96C34 613 aa13.71□□□□□ -0.21
CDK11A-216ENST00000479362 MKRN1Q9UHC7 482 aaKnown RBP13.71□□□□□ -0.21
CDK11A-216ENST00000479362 KDM6AO15550 1401 aaPredicted RBP13.71□□□□□ -0.22
CDK11A-216ENST00000479362 VIRMAQ69YN4 1812 aaKnown RBP13.71□□□□□ -0.22
CDK11A-216ENST00000479362 CTCFP49711 727 aaPredicted RBP13.7□□□□□ -0.22
CDK11A-216ENST00000479362 RGS19P49795 217 aa13.7□□□□□ -0.22
CDK11A-216ENST00000479362 FKBP8Q14318 412 aa13.7□□□□□ -0.22
CDK11A-216ENST00000479362 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
CDK11A-216ENST00000479362 VEGFAP15692 232 aaPredicted RBP13.69□□□□□ -0.22
CDK11A-216ENST00000479362 MPRIPQ6WCQ1 1025 aa13.69□□□□□ -0.22
CDK11A-216ENST00000479362 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
CDK11A-216ENST00000479362 ZC3H4Q9UPT8 1303 aaKnown RBP13.68□□□□□ -0.22
CDK11A-216ENST00000479362 PDE4DIPQ5VU43 2346 aa13.68□□□□□ -0.22
CDK11A-216ENST00000479362 CCDC88AQ3V6T2 1871 aa13.68□□□□□ -0.22
CDK11A-216ENST00000479362 GNPATO15228 680 aa13.68□□□□□ -0.22
CDK11A-216ENST00000479362 RAPGEF4Q8WZA2 1011 aa13.68□□□□□ -0.22
CDK11A-216ENST00000479362 YTHDC1Q96MU7 727 aaKnown RBP13.68□□□□□ -0.22
CDK11A-216ENST00000479362 CNTNAP1P78357 1384 aa13.68□□□□□ -0.22
CDK11A-216ENST00000479362 TATP17735 454 aaPredicted RBP13.67□□□□□ -0.22
CDK11A-216ENST00000479362 LBX1P52954 281 aa13.67□□□□□ -0.22
CDK11A-216ENST00000479362 HNRNPUQ00839 825 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDK11A-216ENST00000479362 SMARCC1Q92922 1105 aaPredicted RBP13.67□□□□□ -0.22
CDK11A-216ENST00000479362 GLTPD2A6NH11 291 aa13.66□□□□□ -0.22
CDK11A-216ENST00000479362 APAF1O14727 1248 aa13.66□□□□□ -0.22
CDK11A-216ENST00000479362 PHACTR3Q96KR7 559 aa13.66□□□□□ -0.22
CDK11A-216ENST00000479362 CCDC87Q9NVE4 849 aa13.66□□□□□ -0.22
CDK11A-216ENST00000479362 PIM2Q9P1W9 311 aa13.66□□□□□ -0.22
CDK11A-216ENST00000479362 LOC102724428A0A0B4J2F2 783 aa13.65□□□□□ -0.22
CDK11A-216ENST00000479362 SPDYE4A6NLX3 237 aa13.65□□□□□ -0.22
CDK11A-216ENST00000479362 POTECB2RU33 542 aa13.65□□□□□ -0.22
CDK11A-216ENST00000479362 SIK1P57059 783 aa13.65□□□□□ -0.22
CDK11A-216ENST00000479362 ITPK1Q13572 414 aa13.65□□□□□ -0.22
CDK11A-216ENST00000479362 DALRD3Q5D0E6 543 aaKnown RBP13.65□□□□□ -0.22
CDK11A-216ENST00000479362 AIDAQ96BJ3 306 aa13.65□□□□□ -0.22
CDK11A-216ENST00000479362 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
CDK11A-216ENST00000479362 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
CDK11A-216ENST00000479362 RASSF7Q02833 373 aa13.64□□□□□ -0.23
CDK11A-216ENST00000479362 NFE2L2Q16236 605 aa13.64□□□□□ -0.23
CDK11A-216ENST00000479362 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
CDK11A-216ENST00000479362 AMOTQ4VCS5 1084 aa13.64□□□□□ -0.23
CDK11A-216ENST00000479362 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
CDK11A-216ENST00000479362 PIGBQ92521 554 aa13.64□□□□□ -0.23
CDK11A-216ENST00000479362 WBP1LQ9NX94 342 aa13.64□□□□□ -0.23
CDK11A-216ENST00000479362 PCDH11XQ9BZA7 1347 aa13.64□□□□□ -0.23
CDK11A-216ENST00000479362 PCDH11YQ9BZA8 1340 aa13.64□□□□□ -0.23
CDK11A-216ENST00000479362 TMPOP42166 694 aaKnown RBP13.63□□□□□ -0.23
CDK11A-216ENST00000479362 MTHFSDQ2M296 383 aaKnown RBP13.63□□□□□ -0.23
CDK11A-216ENST00000479362 PLEKHO1Q53GL0 409 aaPredicted RBP13.63□□□□□ -0.23
CDK11A-216ENST00000479362 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
CDK11A-216ENST00000479362 RRP7AQ9Y3A4 280 aaKnown RBP13.63□□□□□ -0.23
CDK11A-216ENST00000479362 COL5A3P25940 1745 aaPredicted RBP13.62□□□□□ -0.23
CDK11A-216ENST00000479362 CYP27B1O15528 508 aa13.62□□□□□ -0.23
CDK11A-216ENST00000479362 HSPA8P11142 646 aaKnown RBP13.62□□□□□ -0.23
CDK11A-216ENST00000479362 NEUROD2Q15784 382 aa13.62□□□□□ -0.23
CDK11A-216ENST00000479362 ZNF530Q6P9A1 599 aaPredicted RBP13.62□□□□□ -0.23
CDK11A-216ENST00000479362 NGEFQ8N5V2 710 aa13.62□□□□□ -0.23
CDK11A-216ENST00000479362 SPG7Q9UQ90 795 aa13.62□□□□□ -0.23
CDK11A-216ENST00000479362 SCN11AQ9UI33 1791 aa13.61□□□□□ -0.23
CDK11A-216ENST00000479362 CCDC85CA6NKD9 419 aa13.61□□□□□ -0.23
CDK11A-216ENST00000479362 GYS1P13807 737 aa13.61□□□□□ -0.23
CDK11A-216ENST00000479362 VEGFBP49765 207 aa13.61□□□□□ -0.23
CDK11A-216ENST00000479362 RIPK4P57078 832 aa13.61□□□□□ -0.23
CDK11A-216ENST00000479362 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDK11A-216ENST00000479362 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
CDK11A-216ENST00000479362 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
CDK11A-216ENST00000479362 ADAMTS7Q9UKP4 1686 aa13.6□□□□□ -0.23
CDK11A-216ENST00000479362 LMOD3Q0VAK6 560 aa13.6□□□□□ -0.23
CDK11A-216ENST00000479362 C1orf141Q5JVX7 400 aa13.6□□□□□ -0.23
CDK11A-216ENST00000479362 PARP3Q9Y6F1 533 aa13.6□□□□□ -0.23
CDK11A-216ENST00000479362 DLEC1Q9Y238 1755 aa13.6□□□□□ -0.23
CDK11A-216ENST00000479362 ZNF831Q5JPB2 1677 aa13.59□□□□□ -0.23
CDK11A-216ENST00000479362 LMNB1P20700 586 aa13.59□□□□□ -0.23
CDK11A-216ENST00000479362 CHRNA5P30532 468 aa13.59□□□□□ -0.23
CDK11A-216ENST00000479362 MYH14Q7Z406 1995 aaKnown RBP13.59□□□□□ -0.23
CDK11A-216ENST00000479362 DICER1Q9UPY3 1922 aaKnown RBP13.58□□□□□ -0.23
CDK11A-216ENST00000479362 POTEIP0CG38 1075 aa13.58□□□□□ -0.24
CDK11A-216ENST00000479362 POTEJP0CG39 1038 aa13.58□□□□□ -0.24
CDK11A-216ENST00000479362 ATP6V1AP38606 617 aa13.58□□□□□ -0.24
CDK11A-216ENST00000479362 CCDC27Q2M243 656 aa13.58□□□□□ -0.24
CDK11A-216ENST00000479362 AKAP4Q5JQC9 854 aa13.58□□□□□ -0.24
CDK11A-216ENST00000479362 TRAPPC3LQ5T215 181 aa13.58□□□□□ -0.24
CDK11A-216ENST00000479362 CHADLQ6NUI6 762 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms