RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 PLSCR1O15162 318 aa16.18■□□□□ 0.18
CNKSR3-204ENST00000479339 HMGN5P82970 282 aaKnown RBP16.18■□□□□ 0.18
CNKSR3-204ENST00000479339 PSDA5PKW4 1024 aaPredicted RBP16.17■□□□□ 0.18
CNKSR3-204ENST00000479339 GTF2F1P35269 517 aaKnown RBP eCLIP16.16■□□□□ 0.18
CNKSR3-204ENST00000479339 DDX49Q9Y6V7 483 aaKnown RBP16.16■□□□□ 0.18
CNKSR3-204ENST00000479339 RGPD3A6NKT7 1758 aaPredicted RBP16.16■□□□□ 0.18
CNKSR3-204ENST00000479339 RGPD4Q7Z3J3 1758 aa16.16■□□□□ 0.18
CNKSR3-204ENST00000479339 PTF1AQ7RTS3 328 aa16.16■□□□□ 0.18
CNKSR3-204ENST00000479339 R3HDM1Q15032 1099 aaKnown RBP16.15■□□□□ 0.18
CNKSR3-204ENST00000479339 PANK1Q8TE04 598 aa16.15■□□□□ 0.18
CNKSR3-204ENST00000479339 FLT4P35916 1363 aa16.15■□□□□ 0.18
CNKSR3-204ENST00000479339 NUP188Q5SRE5 1749 aa16.15■□□□□ 0.18
CNKSR3-204ENST00000479339 TMEM51Q9NW97 253 aa16.14■□□□□ 0.17
CNKSR3-204ENST00000479339 NPC1L1Q9UHC9 1359 aa16.14■□□□□ 0.17
CNKSR3-204ENST00000479339 LRP5O75197 1615 aa16.13■□□□□ 0.17
CNKSR3-204ENST00000479339 NBPF14Q5TI25 921 aa16.13■□□□□ 0.17
CNKSR3-204ENST00000479339 PCDHB15Q9Y5E8 787 aa16.13■□□□□ 0.17
CNKSR3-204ENST00000479339 NBPF6Q5VWK0 638 aa16.12■□□□□ 0.17
CNKSR3-204ENST00000479339 NBPF4Q96M43 638 aa16.12■□□□□ 0.17
CNKSR3-204ENST00000479339 KIAA2012Q0VF49 1180 aa16.12■□□□□ 0.17
CNKSR3-204ENST00000479339 HSP90AB2PQ58FF8 381 aa16.12■□□□□ 0.17
CNKSR3-204ENST00000479339 ARID3AQ99856 593 aa16.12■□□□□ 0.17
CNKSR3-204ENST00000479339 SPINK5Q9NQ38 1064 aaPredicted RBP16.12■□□□□ 0.17
CNKSR3-204ENST00000479339 NHSQ6T4R5 1651 aa16.12■□□□□ 0.17
CNKSR3-204ENST00000479339 ZSCAN23Q3MJ62 389 aa16.11■□□□□ 0.17
CNKSR3-204ENST00000479339 EMILIN1Q9Y6C2 1016 aa16.11■□□□□ 0.17
CNKSR3-204ENST00000479339 MEGF6O75095 1541 aa16.1■□□□□ 0.17
CNKSR3-204ENST00000479339 KCNQ2O43526 872 aa16.1■□□□□ 0.17
CNKSR3-204ENST00000479339 PROM2Q8N271 834 aa16.1■□□□□ 0.17
CNKSR3-204ENST00000479339 KNSTRNQ9Y448 316 aa16.1■□□□□ 0.17
CNKSR3-204ENST00000479339 RGPD2P0DJD1 1756 aa16.1■□□□□ 0.17
CNKSR3-204ENST00000479339 BAG4O95429 457 aaKnown RBP16.09■□□□□ 0.17
CNKSR3-204ENST00000479339 ACSBG1Q96GR2 724 aa16.09■□□□□ 0.17
CNKSR3-204ENST00000479339 ANKRD26Q9UPS8 1709 aa16.09■□□□□ 0.17
CNKSR3-204ENST00000479339 K7ELQ4 463 aaPredicted RBP16.09■□□□□ 0.17
CNKSR3-204ENST00000479339 ZCRB1Q8TBF4 217 aaKnown RBP16.09■□□□□ 0.17
CNKSR3-204ENST00000479339 DDX54Q8TDD1 881 aaKnown RBP16.09■□□□□ 0.17
CNKSR3-204ENST00000479339 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
CNKSR3-204ENST00000479339 APAF1O14727 1248 aa16.08■□□□□ 0.16
CNKSR3-204ENST00000479339 USHBP1Q8N6Y0 703 aa16.08■□□□□ 0.16
CNKSR3-204ENST00000479339 RBSNQ9H1K0 784 aa16.08■□□□□ 0.16
CNKSR3-204ENST00000479339 NSD2O96028 1365 aa16.08■□□□□ 0.16
CNKSR3-204ENST00000479339 POLKQ9UBT6 870 aa16.07■□□□□ 0.16
CNKSR3-204ENST00000479339 CBX1P83916 185 aa16.07■□□□□ 0.16
CNKSR3-204ENST00000479339 TXNRD1Q16881 649 aa16.07■□□□□ 0.16
CNKSR3-204ENST00000479339 RAPGEF4Q8WZA2 1011 aa16.07■□□□□ 0.16
CNKSR3-204ENST00000479339 NCAPD2Q15021 1401 aa16.07■□□□□ 0.16
CNKSR3-204ENST00000479339 ZNF710Q8N1W2 664 aa16.06■□□□□ 0.16
CNKSR3-204ENST00000479339 TATP17735 454 aaPredicted RBP16.06■□□□□ 0.16
CNKSR3-204ENST00000479339 SSFA2P28290 1259 aa16.06■□□□□ 0.16
CNKSR3-204ENST00000479339 RARSP54136 660 aaKnown RBP16.06■□□□□ 0.16
CNKSR3-204ENST00000479339 NUCB2P80303 420 aa16.06■□□□□ 0.16
CNKSR3-204ENST00000479339 HDAC1Q13547 482 aaPredicted RBP16.06■□□□□ 0.16
CNKSR3-204ENST00000479339 AMER1Q5JTC6 1135 aaPredicted RBP16.06■□□□□ 0.16
CNKSR3-204ENST00000479339 SHANK3Q9BYB0 1731 aa16.05■□□□□ 0.16
CNKSR3-204ENST00000479339 KIF16BQ96L93 1317 aa16.05■□□□□ 0.16
CNKSR3-204ENST00000479339 CDK11BP21127 795 aaKnown RBP16.05■□□□□ 0.16
CNKSR3-204ENST00000479339 KIF3AQ9Y496 699 aa16.04■□□□□ 0.16
CNKSR3-204ENST00000479339 SLC20A2Q08357 652 aa16.04■□□□□ 0.16
CNKSR3-204ENST00000479339 CAVIN1Q6NZI2 390 aaKnown RBP16.04■□□□□ 0.16
CNKSR3-204ENST00000479339 LRSAM1Q6UWE0 723 aa16.04■□□□□ 0.16
CNKSR3-204ENST00000479339 MVPQ14764 893 aaKnown RBP16.03■□□□□ 0.16
CNKSR3-204ENST00000479339 CCDC146Q8IYE0 955 aa16.03■□□□□ 0.16
CNKSR3-204ENST00000479339 FEZ1Q99689 392 aa16.03■□□□□ 0.16
CNKSR3-204ENST00000479339 BTAF1O14981 1849 aa16.03■□□□□ 0.16
CNKSR3-204ENST00000479339 MAP2P11137 1827 aaKnown RBP16.02■□□□□ 0.16
CNKSR3-204ENST00000479339 ATP2B3Q16720 1220 aa16.02■□□□□ 0.15
CNKSR3-204ENST00000479339 DNTTIP2Q5QJE6 756 aaKnown RBP16.02■□□□□ 0.15
CNKSR3-204ENST00000479339 LMBRD1Q9NUN5 540 aa16.02■□□□□ 0.15
CNKSR3-204ENST00000479339 PRIM1P49642 420 aaKnown RBP16.01■□□□□ 0.15
CNKSR3-204ENST00000479339 GABPB1Q06547 395 aaPredicted RBP16.01■□□□□ 0.15
CNKSR3-204ENST00000479339 PIBF1Q8WXW3 757 aa16.01■□□□□ 0.15
CNKSR3-204ENST00000479339 EYA1Q99502 592 aa16.01■□□□□ 0.15
CNKSR3-204ENST00000479339 STK32BQ9NY57 414 aa16.01■□□□□ 0.15
CNKSR3-204ENST00000479339 PCDH11XQ9BZA7 1347 aa16.01■□□□□ 0.15
CNKSR3-204ENST00000479339 PCDH11YQ9BZA8 1340 aa16.01■□□□□ 0.15
CNKSR3-204ENST00000479339 PDCL2Q8N4E4 241 aa16.01■□□□□ 0.15
CNKSR3-204ENST00000479339 RLBP1P12271 317 aa16■□□□□ 0.15
CNKSR3-204ENST00000479339 EIF4A2Q14240 407 aaKnown RBP16■□□□□ 0.15
CNKSR3-204ENST00000479339 MORC1Q86VD1 984 aa16■□□□□ 0.15
CNKSR3-204ENST00000479339 WWC1Q8IX03 1113 aa16■□□□□ 0.15
CNKSR3-204ENST00000479339 DOT1LQ8TEK3 1739 aa16■□□□□ 0.15
CNKSR3-204ENST00000479339 PTMAP06454 111 aaKnown RBP15.99■□□□□ 0.15
CNKSR3-204ENST00000479339 SLC15A2Q16348 729 aa15.99■□□□□ 0.15
CNKSR3-204ENST00000479339 PAPPAQ13219 1627 aa15.99■□□□□ 0.15
CNKSR3-204ENST00000479339 SLC27A3Q5K4L6 730 aa15.99■□□□□ 0.15
CNKSR3-204ENST00000479339 MCTP1Q6DN14 999 aa15.99■□□□□ 0.15
CNKSR3-204ENST00000479339 KIF2CQ99661 725 aa15.99■□□□□ 0.15
CNKSR3-204ENST00000479339 CASZ1Q86V15 1759 aa15.98■□□□□ 0.15
CNKSR3-204ENST00000479339 PKD1L3Q7Z443 1732 aa15.98■□□□□ 0.15
CNKSR3-204ENST00000479339 CYP27B1O15528 508 aa15.98■□□□□ 0.15
CNKSR3-204ENST00000479339 CYP2E1P05181 493 aaPredicted RBP15.98■□□□□ 0.15
CNKSR3-204ENST00000479339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.98■□□□□ 0.152e-7■■□□□ 13.8
CNKSR3-204ENST00000479339 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.98■□□□□ 0.15
CNKSR3-204ENST00000479339 PLEKHG2Q9H7P9 1386 aa15.98■□□□□ 0.15
CNKSR3-204ENST00000479339 CCDC66A2RUB6 948 aa15.97■□□□□ 0.15
CNKSR3-204ENST00000479339 SYTL4Q96C24 671 aaPredicted RBP15.97■□□□□ 0.15
CNKSR3-204ENST00000479339 SPON1Q9HCB6 807 aa15.97■□□□□ 0.15
CNKSR3-204ENST00000479339 LRRC4BQ9NT99 713 aa15.97■□□□□ 0.15
CNKSR3-204ENST00000479339 CWC22Q9HCG8 908 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms