RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 USP44Q9H0E7 712 aa12.29□□□□□ -0.44
RAD51B-208ENST00000479335 PI4KAP2A4QPH2 592 aa12.29□□□□□ -0.44
RAD51B-208ENST00000479335 ATP8B2P98198 1209 aa12.29□□□□□ -0.44
RAD51B-208ENST00000479335 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
RAD51B-208ENST00000479335 BEND3Q5T5X7 828 aa12.29□□□□□ -0.44
RAD51B-208ENST00000479335 PI4KAP1Q8N8J0 262 aa12.29□□□□□ -0.44
RAD51B-208ENST00000479335 ZNF496Q96IT1 587 aaPredicted RBP12.29□□□□□ -0.44
RAD51B-208ENST00000479335 LNPKQ9C0E8 428 aa12.29□□□□□ -0.44
RAD51B-208ENST00000479335 ZBTB47Q9UFB7 747 aaPredicted RBP12.29□□□□□ -0.44
RAD51B-208ENST00000479335 ERBB4Q15303 1308 aa12.28□□□□□ -0.44
RAD51B-208ENST00000479335 UBTFL1P0CB47 393 aaPredicted RBP12.28□□□□□ -0.44
RAD51B-208ENST00000479335 PDIA6Q15084 440 aa12.28□□□□□ -0.44
RAD51B-208ENST00000479335 PHLPP1O60346 1717 aa12.28□□□□□ -0.44
RAD51B-208ENST00000479335 COL16A1Q07092 1604 aaPredicted RBP12.28□□□□□ -0.44
RAD51B-208ENST00000479335 ADCY9O60503 1353 aa12.27□□□□□ -0.44
RAD51B-208ENST00000479335 BMP2KLQ5H9B9 411 aa12.27□□□□□ -0.44
RAD51B-208ENST00000479335 DDRGK1Q96HY6 314 aa12.27□□□□□ -0.44
RAD51B-208ENST00000479335 CDCA7Q9BWT1 371 aaPredicted RBP12.27□□□□□ -0.44
RAD51B-208ENST00000479335 SHANK3Q9BYB0 1731 aa12.27□□□□□ -0.44
RAD51B-208ENST00000479335 DISP2A7MBM2 1401 aa12.26□□□□□ -0.45
RAD51B-208ENST00000479335 PRAMEF22A3QJZ6 481 aa12.26□□□□□ -0.45
RAD51B-208ENST00000479335 EIF5BO60841 1220 aaKnown RBP12.26□□□□□ -0.45
RAD51B-208ENST00000479335 LINS1Q8NG48 757 aa12.26□□□□□ -0.45
RAD51B-208ENST00000479335 THRAP3Q9Y2W1 955 aaKnown RBP12.26□□□□□ -0.45
RAD51B-208ENST00000479335 C5P01031 1676 aa12.25□□□□□ -0.45
RAD51B-208ENST00000479335 PLCH1Q4KWH8 1693 aa12.25□□□□□ -0.45
RAD51B-208ENST00000479335 ANXA1P04083 346 aa12.25□□□□□ -0.45
RAD51B-208ENST00000479335 PROSER3Q2NL68 480 aa12.25□□□□□ -0.45
RAD51B-208ENST00000479335 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
RAD51B-208ENST00000479335 SSH3Q8TE77 659 aa12.25□□□□□ -0.45
RAD51B-208ENST00000479335 UPF2Q9HAU5 1272 aaKnown RBP12.25□□□□□ -0.45
RAD51B-208ENST00000479335 MAP3K2Q9Y2U5 619 aa12.25□□□□□ -0.45
RAD51B-208ENST00000479335 UBR2Q8IWV8 1755 aa12.25□□□□□ -0.45
RAD51B-208ENST00000479335 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
RAD51B-208ENST00000479335 USP16Q9Y5T5 823 aa12.24□□□□□ -0.45
RAD51B-208ENST00000479335 LRRFIP2Q9Y608 721 aaKnown RBP12.24□□□□□ -0.45
RAD51B-208ENST00000479335 PAPPAQ13219 1627 aa12.24□□□□□ -0.45
RAD51B-208ENST00000479335 LAMB4A4D0S4 1761 aa12.24□□□□□ -0.45
RAD51B-208ENST00000479335 EXOC5O00471 708 aa12.23□□□□□ -0.45
RAD51B-208ENST00000479335 LRP10Q7Z4F1 713 aa12.23□□□□□ -0.45
RAD51B-208ENST00000479335 TEX13AQ9BXU3 409 aaPredicted RBP12.23□□□□□ -0.45
RAD51B-208ENST00000479335 UTYO14607 1347 aa12.23□□□□□ -0.45
RAD51B-208ENST00000479335 TNS2Q63HR2 1409 aa12.23□□□□□ -0.45
RAD51B-208ENST00000479335 NEXNQ0ZGT2 675 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 MTX1Q13505 466 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 POLA2Q14181 598 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 RIC3Q7Z5B4 369 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 PLEKHM2Q8IWE5 1019 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 LRP6O75581 1613 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 RAB11FIP3O75154 756 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 ANKRD13DQ6ZTN6 518 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 COPS6Q7L5N1 327 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 METTL22Q9BUU2 404 aaPredicted RBP12.22□□□□□ -0.45
RAD51B-208ENST00000479335 OSBPL3Q9H4L5 887 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 TMOD3Q9NYL9 352 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
RAD51B-208ENST00000479335 USP35Q9P2H5 1018 aa12.22□□□□□ -0.45
RAD51B-208ENST00000479335 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.45
RAD51B-208ENST00000479335 GLI3P10071 1580 aa12.21□□□□□ -0.45
RAD51B-208ENST00000479335 PNMA6EA0A0J9YXQ4 647 aa12.21□□□□□ -0.46
RAD51B-208ENST00000479335 DCAF8L1A6NGE4 600 aa12.21□□□□□ -0.46
RAD51B-208ENST00000479335 NBPF7P0C2Y1 421 aaPredicted RBP12.21□□□□□ -0.46
RAD51B-208ENST00000479335 HSP90AB4PQ58FF6 505 aa12.21□□□□□ -0.46
RAD51B-208ENST00000479335 XAGE3Q8WTP9 111 aa12.21□□□□□ -0.46
RAD51B-208ENST00000479335 NWD2Q9ULI1 1742 aa12.21□□□□□ -0.46
RAD51B-208ENST00000479335 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
RAD51B-208ENST00000479335 SPATA31A1Q5TZJ5 1347 aa12.2□□□□□ -0.46
RAD51B-208ENST00000479335 SEC24BO95487 1268 aa12.2□□□□□ -0.46
RAD51B-208ENST00000479335 MYL6BP14649 208 aa12.2□□□□□ -0.46
RAD51B-208ENST00000479335 AIMP1Q12904 312 aaKnown RBP12.2□□□□□ -0.46
RAD51B-208ENST00000479335 LRRCC1Q9C099 1032 aa12.2□□□□□ -0.46
RAD51B-208ENST00000479335 NOP58Q9Y2X3 529 aaKnown RBP12.2□□□□□ -0.46
RAD51B-208ENST00000479335 WNK3Q9BYP7 1800 aa12.2□□□□□ -0.46
RAD51B-208ENST00000479335 UBAP1LF5GYI3 381 aa12.19□□□□□ -0.46
RAD51B-208ENST00000479335 GRM8O00222 908 aa12.19□□□□□ -0.46
RAD51B-208ENST00000479335 PPP1R42Q7Z4L9 355 aa12.19□□□□□ -0.46
RAD51B-208ENST00000479335 PLBD2Q8NHP8 589 aa12.19□□□□□ -0.46
RAD51B-208ENST00000479335 TOGARAM1Q9Y4F4 1720 aa12.19□□□□□ -0.46
RAD51B-208ENST00000479335 SLIT2O94813 1529 aa12.19□□□□□ -0.46
RAD51B-208ENST00000479335 NEURL1BA8MQ27 555 aa12.19□□□□□ -0.46
RAD51B-208ENST00000479335 PIP4K2BP78356 416 aa12.19□□□□□ -0.46
RAD51B-208ENST00000479335 TTC22Q5TAA0 569 aa12.19□□□□□ -0.46
RAD51B-208ENST00000479335 BARGINQ6ZT62 677 aa12.19□□□□□ -0.46
RAD51B-208ENST00000479335 TBC1D32Q96NH3 1257 aa12.19□□□□□ -0.46
RAD51B-208ENST00000479335 COL15A1P39059 1388 aa12.18□□□□□ -0.46
RAD51B-208ENST00000479335 SPATA31A5Q5VU36 1347 aa12.18□□□□□ -0.46
RAD51B-208ENST00000479335 SPATA31A7Q8IWB4 1347 aa12.18□□□□□ -0.46
RAD51B-208ENST00000479335 ADAMTS2O95450 1211 aa12.18□□□□□ -0.46
RAD51B-208ENST00000479335 IGKV5-2P06315 115 aa12.18□□□□□ -0.46
RAD51B-208ENST00000479335 ERICH6Q7L0X2 663 aa12.18□□□□□ -0.46
RAD51B-208ENST00000479335 PIGBQ92521 554 aa12.18□□□□□ -0.46
RAD51B-208ENST00000479335 BCL9O00512 1426 aa12.17□□□□□ -0.46
RAD51B-208ENST00000479335 JCADQ9P266 1359 aa12.17□□□□□ -0.46
RAD51B-208ENST00000479335 SRGAP3O43295 1099 aa12.17□□□□□ -0.46
RAD51B-208ENST00000479335 GCKRQ14397 625 aa12.17□□□□□ -0.46
RAD51B-208ENST00000479335 CWF19L2Q2TBE0 894 aaKnown RBP12.17□□□□□ -0.46
RAD51B-208ENST00000479335 C16orf71Q8IYS4 520 aaPredicted RBP12.17□□□□□ -0.46
RAD51B-208ENST00000479335 KIF1BPQ96EK5 621 aa12.17□□□□□ -0.46
RAD51B-208ENST00000479335 STAP2Q9UGK3 403 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms