RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 USPL1Q5W0Q7 1092 aa27.18■■□□□ 1.94
TRIM8-203ENST00000479004 WWC3Q9ULE0 1092 aa27.18■■□□□ 1.94
TRIM8-203ENST00000479004 COL15A1P39059 1388 aa27.18■■□□□ 1.94
TRIM8-203ENST00000479004 BTBD11A6QL63 1104 aa27.17■■□□□ 1.94
TRIM8-203ENST00000479004 TM4SF1P30408 202 aa27.17■■□□□ 1.94
TRIM8-203ENST00000479004 RTF1Q92541 710 aaKnown RBP27.17■■□□□ 1.94
TRIM8-203ENST00000479004 TEX13AQ9BXU3 409 aaPredicted RBP27.17■■□□□ 1.94
TRIM8-203ENST00000479004 NARFQ9UHQ1 456 aa27.17■■□□□ 1.94
TRIM8-203ENST00000479004 ZNF316A6NFI3 1004 aaPredicted RBP27.16■■□□□ 1.94
TRIM8-203ENST00000479004 DDR1Q08345 913 aa27.16■■□□□ 1.94
TRIM8-203ENST00000479004 FMNL2Q96PY5 1086 aa27.16■■□□□ 1.94
TRIM8-203ENST00000479004 KCNQ3O43525 872 aa27.15■■□□□ 1.94
TRIM8-203ENST00000479004 HTATSF1O43719 755 aaKnown RBP27.15■■□□□ 1.94
TRIM8-203ENST00000479004 CANXP27824 592 aaKnown RBP27.15■■□□□ 1.94
TRIM8-203ENST00000479004 MCM10Q7L590 875 aa27.15■■□□□ 1.94
TRIM8-203ENST00000479004 A0A0G2JLW4 131 aa27.14■■□□□ 1.94
TRIM8-203ENST00000479004 EIF5P55010 431 aaKnown RBP27.13■■□□□ 1.93
TRIM8-203ENST00000479004 POLRMTO00411 1230 aaKnown RBP27.12■■□□□ 1.93
TRIM8-203ENST00000479004 DCTN1Q14203 1278 aa27.12■■□□□ 1.93
TRIM8-203ENST00000479004 RALBP1Q15311 655 aa27.12■■□□□ 1.93
TRIM8-203ENST00000479004 BCL2L12Q9HB09 334 aa27.12■■□□□ 1.93
TRIM8-203ENST00000479004 BRCA1P38398 1863 aaKnown RBP27.11■■□□□ 1.93
TRIM8-203ENST00000479004 DPEP1P16444 411 aa27.11■■□□□ 1.93
TRIM8-203ENST00000479004 DDX10Q13206 875 aaKnown RBP27.11■■□□□ 1.93
TRIM8-203ENST00000479004 PLEKHF1Q96S99 279 aa27.11■■□□□ 1.93
TRIM8-203ENST00000479004 DLG5Q8TDM6 1919 aa27.11■■□□□ 1.93
TRIM8-203ENST00000479004 A0A087WZG4 1122 aa27.09■■□□□ 1.93
TRIM8-203ENST00000479004 NEFMP07197 916 aa27.09■■□□□ 1.93
TRIM8-203ENST00000479004 NFIXQ14938 502 aa27.09■■□□□ 1.93
TRIM8-203ENST00000479004 KCNA3P22001 575 aa27.08■■□□□ 1.93
TRIM8-203ENST00000479004 AFDNP55196 1824 aaKnown RBP27.08■■□□□ 1.93
TRIM8-203ENST00000479004 IL6STP40189 918 aaPredicted RBP27.07■■□□□ 1.92
TRIM8-203ENST00000479004 BCS1LQ9Y276 419 aa27.07■■□□□ 1.92
TRIM8-203ENST00000479004 A1BGP04217 495 aa27.06■■□□□ 1.92
TRIM8-203ENST00000479004 NRXN2Q9P2S2 1712 aa27.06■■□□□ 1.92
TRIM8-203ENST00000479004 TAF7Q15545 349 aaPredicted RBP27.05■■□□□ 1.92
TRIM8-203ENST00000479004 PNNQ9H307 717 aaKnown RBP27.05■■□□□ 1.92
TRIM8-203ENST00000479004 USP16Q9Y5T5 823 aa27.05■■□□□ 1.92
TRIM8-203ENST00000479004 PRAMEF22A3QJZ6 481 aa27.03■■□□□ 1.92
TRIM8-203ENST00000479004 ADCY9O60503 1353 aa27.03■■□□□ 1.92
TRIM8-203ENST00000479004 SNRPA1P09661 255 aaKnown RBP27.03■■□□□ 1.92
TRIM8-203ENST00000479004 NFE2L2Q16236 605 aa27.03■■□□□ 1.92
TRIM8-203ENST00000479004 SCN7AQ01118 1682 aa27.02■■□□□ 1.92
TRIM8-203ENST00000479004 ATP10DQ9P241 1426 aa27.02■■□□□ 1.92
TRIM8-203ENST00000479004 SERPINB2P05120 415 aa27.02■■□□□ 1.92
TRIM8-203ENST00000479004 PIM2Q9P1W9 311 aa27.02■■□□□ 1.92
TRIM8-203ENST00000479004 TBC1D2BQ9UPU7 963 aa27.02■■□□□ 1.92
TRIM8-203ENST00000479004 ZNF330Q9Y3S2 320 aaPredicted RBP27.02■■□□□ 1.92
TRIM8-203ENST00000479004 ARFGEF1Q9Y6D6 1849 aa27.02■■□□□ 1.92
TRIM8-203ENST00000479004 MAPK8IP3Q9UPT6 1336 aa27■■□□□ 1.91
TRIM8-203ENST00000479004 CHRNA5P30532 468 aa27■■□□□ 1.91
TRIM8-203ENST00000479004 MIS18AQ9NYP9 233 aa27■■□□□ 1.91
TRIM8-203ENST00000479004 MYBBP1AQ9BQG0 1328 aaKnown RBP26.99■■□□□ 1.91
TRIM8-203ENST00000479004 TBC1D9BQ66K14 1250 aa26.99■■□□□ 1.91
TRIM8-203ENST00000479004 BICDL1Q6ZP65 573 aa26.98■■□□□ 1.91
TRIM8-203ENST00000479004 NPM2Q86SE8 214 aaKnown RBP26.98■■□□□ 1.91
TRIM8-203ENST00000479004 PNISRQ8TF01 805 aaKnown RBP26.98■■□□□ 1.91
TRIM8-203ENST00000479004 KDM3BQ7LBC6 1761 aa26.97■■□□□ 1.91
TRIM8-203ENST00000479004 GIGYF1O75420 1035 aaPredicted RBP26.97■■□□□ 1.91
TRIM8-203ENST00000479004 CAMTA2O94983 1202 aa26.97■■□□□ 1.91
TRIM8-203ENST00000479004 DALRD3Q5D0E6 543 aaKnown RBP26.97■■□□□ 1.91
TRIM8-203ENST00000479004 ARHGAP27Q6ZUM4 889 aa26.97■■□□□ 1.91
TRIM8-203ENST00000479004 PIP4K2AP48426 406 aaPredicted RBP26.96■■□□□ 1.91
TRIM8-203ENST00000479004 C1QTNF8P60827 252 aa26.96■■□□□ 1.91
TRIM8-203ENST00000479004 BCORQ6W2J9 1755 aa26.96■■□□□ 1.91
TRIM8-203ENST00000479004 DZIP3Q86Y13 1208 aaKnown RBP26.95■■□□□ 1.9
TRIM8-203ENST00000479004 THUMPD2Q9BTF0 503 aaKnown RBP26.95■■□□□ 1.9
TRIM8-203ENST00000479004 LAMB4A4D0S4 1761 aa26.93■■□□□ 1.9
TRIM8-203ENST00000479004 DLEC1Q9Y238 1755 aa26.93■■□□□ 1.9
TRIM8-203ENST00000479004 CARMIL3Q8ND23 1372 aa26.93■■□□□ 1.9
TRIM8-203ENST00000479004 NBPF26B4DH59 902 aa26.92■■□□□ 1.9
TRIM8-203ENST00000479004 NBPF10Q6P3W6 841 aaKnown RBP26.92■■□□□ 1.9
TRIM8-203ENST00000479004 NBPF15Q8N660 670 aa26.92■■□□□ 1.9
TRIM8-203ENST00000479004 GPBP1L1Q9HC44 474 aaPredicted RBP26.92■■□□□ 1.9
TRIM8-203ENST00000479004 ANKRD31Q8N7Z5 1873 aa26.9■■□□□ 1.9
TRIM8-203ENST00000479004 RIPK4P57078 832 aa26.9■■□□□ 1.9
TRIM8-203ENST00000479004 EIF4A1P60842 406 aaKnown RBP26.9■■□□□ 1.9
TRIM8-203ENST00000479004 SETDB2Q96T68 719 aa26.9■■□□□ 1.9
TRIM8-203ENST00000479004 PRR5LQ6MZQ0 368 aa26.89■■□□□ 1.9
TRIM8-203ENST00000479004 CLEC4GQ6UXB4 293 aa26.89■■□□□ 1.9
TRIM8-203ENST00000479004 C2CD5Q86YS7 1000 aa26.89■■□□□ 1.9
TRIM8-203ENST00000479004 ZNF526Q8TF50 670 aaPredicted RBP26.89■■□□□ 1.9
TRIM8-203ENST00000479004 TMPOP42166 694 aaKnown RBP26.88■■□□□ 1.89
TRIM8-203ENST00000479004 H0YIN7 160 aa26.87■■□□□ 1.89
TRIM8-203ENST00000479004 BRIP1Q9BX63 1249 aa26.87■■□□□ 1.89
TRIM8-203ENST00000479004 PRKRIP1Q9H875 184 aaPredicted RBP26.87■■□□□ 1.89
TRIM8-203ENST00000479004 RGL2O15211 777 aa26.85■■□□□ 1.89
TRIM8-203ENST00000479004 CCDC24Q8N4L8 307 aa26.85■■□□□ 1.89
TRIM8-203ENST00000479004 TTLL6Q8N841 843 aa26.85■■□□□ 1.89
TRIM8-203ENST00000479004 PDZRN3Q9UPQ7 1066 aa26.85■■□□□ 1.89
TRIM8-203ENST00000479004 ZNF652Q9Y2D9 606 aa26.85■■□□□ 1.89
TRIM8-203ENST00000479004 PDE6BP35913 854 aa26.84■■□□□ 1.89
TRIM8-203ENST00000479004 CCDC146Q8IYE0 955 aa26.84■■□□□ 1.89
TRIM8-203ENST00000479004 SBF1O95248 1867 aa26.83■■□□□ 1.89
TRIM8-203ENST00000479004 LMOD3Q0VAK6 560 aa26.83■■□□□ 1.89
TRIM8-203ENST00000479004 WDR43Q15061 677 aaKnown RBP eCLIP26.83■■□□□ 1.89
TRIM8-203ENST00000479004 C9orf131Q5VYM1 1079 aa26.83■■□□□ 1.89
TRIM8-203ENST00000479004 CNBD1Q8NA66 436 aa26.83■■□□□ 1.89
TRIM8-203ENST00000479004 TSPYL4Q9UJ04 414 aa26.83■■□□□ 1.89
TRIM8-203ENST00000479004 RUNDC1Q96C34 613 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms