RNA–Protein interactions for RNA: ENST00000478914.1

XRCC6-208, Transcript of X-ray repair cross complementing 6, humanhuman

TSL 2

Gene XRCC6, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6-208ENST00000478914 FCHSD2O94868 740 aa11.64□□□□□ -0.55
XRCC6-208ENST00000478914 FKBP8Q14318 412 aa11.64□□□□□ -0.55
XRCC6-208ENST00000478914 ZNF790Q6PG37 636 aa11.64□□□□□ -0.55
XRCC6-208ENST00000478914 IL17REQ8NFR9 667 aa11.64□□□□□ -0.55
XRCC6-208ENST00000478914 TEX13AQ9BXU3 409 aaPredicted RBP11.64□□□□□ -0.55
XRCC6-208ENST00000478914 A0A0G2JLW4 131 aa11.63□□□□□ -0.55
XRCC6-208ENST00000478914 BTBD11A6QL63 1104 aa11.63□□□□□ -0.55
XRCC6-208ENST00000478914 GIGYF1O75420 1035 aaPredicted RBP11.63□□□□□ -0.55
XRCC6-208ENST00000478914 CANXP27824 592 aaKnown RBP11.63□□□□□ -0.55
XRCC6-208ENST00000478914 USPL1Q5W0Q7 1092 aa11.63□□□□□ -0.55
XRCC6-208ENST00000478914 NPM2Q86SE8 214 aaKnown RBP11.63□□□□□ -0.55
XRCC6-208ENST00000478914 PHACTR3Q96KR7 559 aa11.63□□□□□ -0.55
XRCC6-208ENST00000478914 FMNL2Q96PY5 1086 aa11.63□□□□□ -0.55
XRCC6-208ENST00000478914 BCS1LQ9Y276 419 aa11.63□□□□□ -0.55
XRCC6-208ENST00000478914 ZBTB1Q9Y2K1 713 aa11.63□□□□□ -0.55
XRCC6-208ENST00000478914 CEMIPQ8WUJ3 1361 aa11.63□□□□□ -0.55
XRCC6-208ENST00000478914 HEG1Q9ULI3 1381 aa11.63□□□□□ -0.55
XRCC6-208ENST00000478914 A0A087WZG4 1122 aa11.62□□□□□ -0.55
XRCC6-208ENST00000478914 ZNF496Q96IT1 587 aaPredicted RBP11.62□□□□□ -0.55
XRCC6-208ENST00000478914 NARFQ9UHQ1 456 aa11.62□□□□□ -0.55
XRCC6-208ENST00000478914 SCN7AQ01118 1682 aa11.62□□□□□ -0.55
XRCC6-208ENST00000478914 ATP10DQ9P241 1426 aa11.61□□□□□ -0.55
XRCC6-208ENST00000478914 NRXN2Q9P2S2 1712 aa11.61□□□□□ -0.55
XRCC6-208ENST00000478914 DPEP1P16444 411 aa11.61□□□□□ -0.55
XRCC6-208ENST00000478914 DDR1Q08345 913 aa11.61□□□□□ -0.55
XRCC6-208ENST00000478914 ZNF330Q9Y3S2 320 aaPredicted RBP11.61□□□□□ -0.55
XRCC6-208ENST00000478914 DLEC1Q9Y238 1755 aa11.6□□□□□ -0.55
XRCC6-208ENST00000478914 POLRMTO00411 1230 aaKnown RBP11.6□□□□□ -0.55
XRCC6-208ENST00000478914 TM4SF1P30408 202 aa11.6□□□□□ -0.55
XRCC6-208ENST00000478914 PNNQ9H307 717 aaKnown RBP11.6□□□□□ -0.55
XRCC6-208ENST00000478914 PIM2Q9P1W9 311 aa11.6□□□□□ -0.55
XRCC6-208ENST00000478914 LAMB4A4D0S4 1761 aa11.59□□□□□ -0.55
XRCC6-208ENST00000478914 BCORQ6W2J9 1755 aa11.59□□□□□ -0.55
XRCC6-208ENST00000478914 HTATSF1O43719 755 aaKnown RBP11.59□□□□□ -0.55
XRCC6-208ENST00000478914 ARHGAP27Q6ZUM4 889 aa11.59□□□□□ -0.55
XRCC6-208ENST00000478914 MCM10Q7L590 875 aa11.59□□□□□ -0.55
XRCC6-208ENST00000478914 GPBP1L1Q9HC44 474 aaPredicted RBP11.59□□□□□ -0.55
XRCC6-208ENST00000478914 ADCY9O60503 1353 aa11.58□□□□□ -0.56
XRCC6-208ENST00000478914 IL6STP40189 918 aaPredicted RBP11.58□□□□□ -0.56
XRCC6-208ENST00000478914 EIF5P55010 431 aaKnown RBP11.58□□□□□ -0.56
XRCC6-208ENST00000478914 NFIXQ14938 502 aa11.58□□□□□ -0.56
XRCC6-208ENST00000478914 ZNF526Q8TF50 670 aaPredicted RBP11.58□□□□□ -0.56
XRCC6-208ENST00000478914 MAPK8IP3Q9UPT6 1336 aa11.58□□□□□ -0.56
XRCC6-208ENST00000478914 SBF1O95248 1867 aa11.57□□□□□ -0.56
XRCC6-208ENST00000478914 KDM3BQ7LBC6 1761 aa11.57□□□□□ -0.56
XRCC6-208ENST00000478914 SERPINB2P05120 415 aa11.57□□□□□ -0.56
XRCC6-208ENST00000478914 RALBP1Q15311 655 aa11.57□□□□□ -0.56
XRCC6-208ENST00000478914 DALRD3Q5D0E6 543 aaKnown RBP11.57□□□□□ -0.56
XRCC6-208ENST00000478914 BICDL1Q6ZP65 573 aa11.57□□□□□ -0.56
XRCC6-208ENST00000478914 CACNA1SQ13698 1873 aa11.57□□□□□ -0.56
XRCC6-208ENST00000478914 CCDC88AQ3V6T2 1871 aa11.57□□□□□ -0.56
XRCC6-208ENST00000478914 GOLGB1Q14789 3259 aaKnown RBP11.57□□□□□ -0.56
XRCC6-208ENST00000478914 NPHP1O15259 732 aa11.56□□□□□ -0.56
XRCC6-208ENST00000478914 KCNQ3O43525 872 aa11.56□□□□□ -0.56
XRCC6-208ENST00000478914 A1BGP04217 495 aa11.56□□□□□ -0.56
XRCC6-208ENST00000478914 SNRPA1P09661 255 aaKnown RBP11.56□□□□□ -0.56
XRCC6-208ENST00000478914 CHRNA5P30532 468 aa11.56□□□□□ -0.56
XRCC6-208ENST00000478914 DCTN1Q14203 1278 aa11.56□□□□□ -0.56
XRCC6-208ENST00000478914 TAF7Q15545 349 aaPredicted RBP11.56□□□□□ -0.56
XRCC6-208ENST00000478914 IFFO2Q5TF58 517 aa11.56□□□□□ -0.56
XRCC6-208ENST00000478914 ANKRD31Q8N7Z5 1873 aa11.56□□□□□ -0.56
XRCC6-208ENST00000478914 BCL2L12Q9HB09 334 aa11.56□□□□□ -0.56
XRCC6-208ENST00000478914 TBC1D2BQ9UPU7 963 aa11.56□□□□□ -0.56
XRCC6-208ENST00000478914 KCNA3P22001 575 aa11.55□□□□□ -0.56
XRCC6-208ENST00000478914 PNISRQ8TF01 805 aaKnown RBP11.55□□□□□ -0.56
XRCC6-208ENST00000478914 CARMIL3Q8ND23 1372 aa11.54□□□□□ -0.56
XRCC6-208ENST00000478914 H0YIN7 160 aa11.54□□□□□ -0.56
XRCC6-208ENST00000478914 DDX10Q13206 875 aaKnown RBP11.54□□□□□ -0.56
XRCC6-208ENST00000478914 NFE2L2Q16236 605 aa11.54□□□□□ -0.56
XRCC6-208ENST00000478914 TBC1D9BQ66K14 1250 aa11.54□□□□□ -0.56
XRCC6-208ENST00000478914 DZIP3Q86Y13 1208 aaKnown RBP11.54□□□□□ -0.56
XRCC6-208ENST00000478914 USP16Q9Y5T5 823 aa11.54□□□□□ -0.56
XRCC6-208ENST00000478914 C2CD5Q86YS7 1000 aa11.53□□□□□ -0.56
XRCC6-208ENST00000478914 PLEKHF1Q96S99 279 aa11.53□□□□□ -0.56
XRCC6-208ENST00000478914 SETDB2Q96T68 719 aa11.53□□□□□ -0.56
XRCC6-208ENST00000478914 PDZRN3Q9UPQ7 1066 aa11.53□□□□□ -0.56
XRCC6-208ENST00000478914 ZNF652Q9Y2D9 606 aa11.53□□□□□ -0.56
XRCC6-208ENST00000478914 COL11A2P13942 1736 aaPredicted RBP11.52□□□□□ -0.56
XRCC6-208ENST00000478914 NUP98P52948 1817 aa11.52□□□□□ -0.57
XRCC6-208ENST00000478914 PRAMEF22A3QJZ6 481 aa11.52□□□□□ -0.57
XRCC6-208ENST00000478914 CAMTA2O94983 1202 aa11.52□□□□□ -0.57
XRCC6-208ENST00000478914 PDE6BP35913 854 aa11.52□□□□□ -0.57
XRCC6-208ENST00000478914 PIP4K2AP48426 406 aaPredicted RBP11.52□□□□□ -0.57
XRCC6-208ENST00000478914 MYBBP1AQ9BQG0 1328 aaKnown RBP11.52□□□□□ -0.57
XRCC6-208ENST00000478914 ARFGEF2Q9Y6D5 1785 aa11.51□□□□□ -0.57
XRCC6-208ENST00000478914 ST5P78524 1137 aa11.51□□□□□ -0.57
XRCC6-208ENST00000478914 C9orf131Q5VYM1 1079 aa11.51□□□□□ -0.57
XRCC6-208ENST00000478914 TTLL6Q8N841 843 aa11.51□□□□□ -0.57
XRCC6-208ENST00000478914 CNBD1Q8NA66 436 aa11.51□□□□□ -0.57
XRCC6-208ENST00000478914 MIS18AQ9NYP9 233 aa11.51□□□□□ -0.57
XRCC6-208ENST00000478914 RNF181Q9P0P0 153 aa11.51□□□□□ -0.57
XRCC6-208ENST00000478914 CEP350Q5VT06 3117 aa11.51□□□□□ -0.57
XRCC6-208ENST00000478914 TNRC6CQ9HCJ0 1690 aaKnown RBP11.5□□□□□ -0.57
XRCC6-208ENST00000478914 TIAM2Q8IVF5 1701 aa11.5□□□□□ -0.57
XRCC6-208ENST00000478914 LMOD3Q0VAK6 560 aa11.5□□□□□ -0.57
XRCC6-208ENST00000478914 WDR43Q15061 677 aaKnown RBP eCLIP11.5□□□□□ -0.57
XRCC6-208ENST00000478914 PRR5LQ6MZQ0 368 aa11.5□□□□□ -0.57
XRCC6-208ENST00000478914 CLEC4GQ6UXB4 293 aa11.5□□□□□ -0.57
XRCC6-208ENST00000478914 ZNF622Q969S3 477 aaKnown RBP eCLIP11.5□□□□□ -0.57
XRCC6-208ENST00000478914 BRIP1Q9BX63 1249 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms