RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 SCN7AQ01118 1682 aa29.45■■■□□ 2.31
MCF2L2-210ENST00000478652 VSIG10Q8N0Z9 540 aa29.45■■■□□ 2.31
MCF2L2-210ENST00000478652 CFAP53Q96M91 514 aa29.45■■■□□ 2.31
MCF2L2-210ENST00000478652 DLG5Q8TDM6 1919 aa29.45■■■□□ 2.3
MCF2L2-210ENST00000478652 KCNA3P22001 575 aa29.44■■■□□ 2.3
MCF2L2-210ENST00000478652 DLEC1Q9Y238 1755 aa29.44■■■□□ 2.3
MCF2L2-210ENST00000478652 CEMIPQ8WUJ3 1361 aa29.43■■■□□ 2.3
MCF2L2-210ENST00000478652 SENP3-EIF4A1A0A087X0R7 540 aa29.43■■■□□ 2.3
MCF2L2-210ENST00000478652 POLRMTO00411 1230 aaKnown RBP29.43■■■□□ 2.3
MCF2L2-210ENST00000478652 TM4SF1P30408 202 aa29.43■■■□□ 2.3
MCF2L2-210ENST00000478652 TEFQ10587 303 aa29.43■■■□□ 2.3
MCF2L2-210ENST00000478652 TTC5Q8N0Z6 440 aa29.43■■■□□ 2.3
MCF2L2-210ENST00000478652 ZNF496Q96IT1 587 aaPredicted RBP29.43■■■□□ 2.3
MCF2L2-210ENST00000478652 ZPR1O75312 459 aa29.42■■■□□ 2.3
MCF2L2-210ENST00000478652 ZNF526Q8TF50 670 aaPredicted RBP29.42■■■□□ 2.3
MCF2L2-210ENST00000478652 HEG1Q9ULI3 1381 aa29.41■■■□□ 2.3
MCF2L2-210ENST00000478652 BCL2L12Q9HB09 334 aa29.41■■■□□ 2.3
MCF2L2-210ENST00000478652 NARFQ9UHQ1 456 aa29.41■■■□□ 2.3
MCF2L2-210ENST00000478652 CANXP27824 592 aaKnown RBP29.4■■■□□ 2.3
MCF2L2-210ENST00000478652 ZNF790Q6PG37 636 aa29.4■■■□□ 2.3
MCF2L2-210ENST00000478652 SBF1O95248 1867 aa29.4■■■□□ 2.3
MCF2L2-210ENST00000478652 FCHSD2O94868 740 aa29.39■■■□□ 2.3
MCF2L2-210ENST00000478652 GPBP1L1Q9HC44 474 aaPredicted RBP29.39■■■□□ 2.3
MCF2L2-210ENST00000478652 ANKRD31Q8N7Z5 1873 aa29.38■■■□□ 2.29
MCF2L2-210ENST00000478652 U2AF1L5P0DN76 240 aaPredicted RBP29.38■■■□□ 2.29
MCF2L2-210ENST00000478652 U2AF1Q01081 240 aaKnown RBP eCLIP29.38■■■□□ 2.29
MCF2L2-210ENST00000478652 NFIXQ14938 502 aa29.38■■■□□ 2.29
MCF2L2-210ENST00000478652 BCORQ6W2J9 1755 aa29.37■■■□□ 2.29
MCF2L2-210ENST00000478652 KCNQ3O43525 872 aa29.37■■■□□ 2.29
MCF2L2-210ENST00000478652 CHRNA5P30532 468 aa29.37■■■□□ 2.29
MCF2L2-210ENST00000478652 NUDCQ9Y266 331 aa29.37■■■□□ 2.29
MCF2L2-210ENST00000478652 STARD3NLO95772 234 aa29.34■■■□□ 2.29
MCF2L2-210ENST00000478652 EIF5P55010 431 aaKnown RBP29.34■■■□□ 2.29
MCF2L2-210ENST00000478652 ARHGAP27Q6ZUM4 889 aa29.34■■■□□ 2.29
MCF2L2-210ENST00000478652 PIM2Q9P1W9 311 aa29.33■■■□□ 2.29
MCF2L2-210ENST00000478652 CCDC88AQ3V6T2 1871 aa29.32■■■□□ 2.28
MCF2L2-210ENST00000478652 CARMIL3Q8ND23 1372 aa29.31■■■□□ 2.28
MCF2L2-210ENST00000478652 BTBD11A6QL63 1104 aa29.31■■■□□ 2.28
MCF2L2-210ENST00000478652 MCM10Q7L590 875 aa29.31■■■□□ 2.28
MCF2L2-210ENST00000478652 FMNL2Q96PY5 1086 aa29.31■■■□□ 2.28
MCF2L2-210ENST00000478652 COL11A2P13942 1736 aaPredicted RBP29.31■■■□□ 2.28
MCF2L2-210ENST00000478652 CACNA1SQ13698 1873 aa29.29■■■□□ 2.28
MCF2L2-210ENST00000478652 SERPINB2P05120 415 aa29.29■■■□□ 2.28
MCF2L2-210ENST00000478652 DCTN1Q14203 1278 aa29.29■■■□□ 2.28
MCF2L2-210ENST00000478652 DALRD3Q5D0E6 543 aaKnown RBP29.29■■■□□ 2.28
MCF2L2-210ENST00000478652 BICDL1Q6ZP65 573 aa29.28■■■□□ 2.28
MCF2L2-210ENST00000478652 TEX13AQ9BXU3 409 aaPredicted RBP29.28■■■□□ 2.28
MCF2L2-210ENST00000478652 ZNF330Q9Y3S2 320 aaPredicted RBP29.28■■■□□ 2.28
MCF2L2-210ENST00000478652 LAMB4A4D0S4 1761 aa29.28■■■□□ 2.28
MCF2L2-210ENST00000478652 KDM3BQ7LBC6 1761 aa29.28■■■□□ 2.28
MCF2L2-210ENST00000478652 A1BGP04217 495 aa29.27■■■□□ 2.28
MCF2L2-210ENST00000478652 PRAMEF22A3QJZ6 481 aa29.26■■■□□ 2.27
MCF2L2-210ENST00000478652 TBC1D2BQ9UPU7 963 aa29.26■■■□□ 2.27
MCF2L2-210ENST00000478652 A0A087WZG4 1122 aa29.25■■■□□ 2.27
MCF2L2-210ENST00000478652 KIF3CO14782 793 aa29.25■■■□□ 2.27
MCF2L2-210ENST00000478652 IL6STP40189 918 aaPredicted RBP29.25■■■□□ 2.27
MCF2L2-210ENST00000478652 TBC1D9BQ66K14 1250 aa29.25■■■□□ 2.27
MCF2L2-210ENST00000478652 PIP4K2AP48426 406 aaPredicted RBP29.24■■■□□ 2.27
MCF2L2-210ENST00000478652 RTF1Q92541 710 aaKnown RBP29.24■■■□□ 2.27
MCF2L2-210ENST00000478652 USP16Q9Y5T5 823 aa29.23■■■□□ 2.27
MCF2L2-210ENST00000478652 C9orf131Q5VYM1 1079 aa29.22■■■□□ 2.27
MCF2L2-210ENST00000478652 TIAM2Q8IVF5 1701 aa29.2■■■□□ 2.26
MCF2L2-210ENST00000478652 CAMTA2O94983 1202 aa29.19■■■□□ 2.26
MCF2L2-210ENST00000478652 CCDC24Q8N4L8 307 aa29.18■■■□□ 2.26
MCF2L2-210ENST00000478652 HTATSF1O43719 755 aaKnown RBP29.17■■■□□ 2.26
MCF2L2-210ENST00000478652 C2CD5Q86YS7 1000 aa29.17■■■□□ 2.26
MCF2L2-210ENST00000478652 FER1L6Q2WGJ9 1857 aa29.17■■■□□ 2.26
MCF2L2-210ENST00000478652 ARFGEF2Q9Y6D5 1785 aa29.16■■■□□ 2.26
MCF2L2-210ENST00000478652 RASSF7Q02833 373 aa29.16■■■□□ 2.26
MCF2L2-210ENST00000478652 PLEKHF1Q96S99 279 aa29.16■■■□□ 2.26
MCF2L2-210ENST00000478652 NMRK2Q9NPI5 230 aa29.16■■■□□ 2.26
MCF2L2-210ENST00000478652 MIS18AQ9NYP9 233 aa29.16■■■□□ 2.26
MCF2L2-210ENST00000478652 RNF181Q9P0P0 153 aa29.16■■■□□ 2.26
MCF2L2-210ENST00000478652 TNRC6CQ9HCJ0 1690 aaKnown RBP29.15■■■□□ 2.26
MCF2L2-210ENST00000478652 SNRPA1P09661 255 aaKnown RBP29.15■■■□□ 2.26
MCF2L2-210ENST00000478652 PRR5LQ6MZQ0 368 aa29.15■■■□□ 2.26
MCF2L2-210ENST00000478652 DZIP3Q86Y13 1208 aaKnown RBP29.15■■■□□ 2.26
MCF2L2-210ENST00000478652 SLX4Q8IY92 1834 aa29.14■■■□□ 2.26
MCF2L2-210ENST00000478652 DICER1Q9UPY3 1922 aaKnown RBP29.14■■■□□ 2.25
MCF2L2-210ENST00000478652 CEP350Q5VT06 3117 aa29.12■■■□□ 2.25
MCF2L2-210ENST00000478652 NBPF26B4DH59 902 aa29.12■■■□□ 2.25
MCF2L2-210ENST00000478652 PRELPP51888 382 aa29.12■■■□□ 2.25
MCF2L2-210ENST00000478652 TAF7Q15545 349 aaPredicted RBP29.12■■■□□ 2.25
MCF2L2-210ENST00000478652 NBPF10Q6P3W6 841 aaKnown RBP29.12■■■□□ 2.25
MCF2L2-210ENST00000478652 NBPF15Q8N660 670 aa29.12■■■□□ 2.25
MCF2L2-210ENST00000478652 TTLL6Q8N841 843 aa29.12■■■□□ 2.25
MCF2L2-210ENST00000478652 NUP98P52948 1817 aa29.12■■■□□ 2.25
MCF2L2-210ENST00000478652 H0YIN7 160 aa29.11■■■□□ 2.25
MCF2L2-210ENST00000478652 HSPA6P17066 643 aa29.11■■■□□ 2.25
MCF2L2-210ENST00000478652 NPM2Q86SE8 214 aaKnown RBP29.11■■■□□ 2.25
MCF2L2-210ENST00000478652 THUMPD2Q9BTF0 503 aaKnown RBP29.11■■■□□ 2.25
MCF2L2-210ENST00000478652 NEFMP07197 916 aa29.08■■■□□ 2.25
MCF2L2-210ENST00000478652 NFE2L2Q16236 605 aa29.08■■■□□ 2.25
MCF2L2-210ENST00000478652 CNBD1Q8NA66 436 aa29.08■■■□□ 2.25
MCF2L2-210ENST00000478652 SETDB2Q96T68 719 aa29.08■■■□□ 2.25
MCF2L2-210ENST00000478652 BRIP1Q9BX63 1249 aa29.08■■■□□ 2.25
MCF2L2-210ENST00000478652 NFKBIEO00221 500 aa29.06■■■□□ 2.24
MCF2L2-210ENST00000478652 ZNF622Q969S3 477 aaKnown RBP eCLIP29.06■■■□□ 2.24
MCF2L2-210ENST00000478652 PDE6BP35913 854 aa29.05■■■□□ 2.24
MCF2L2-210ENST00000478652 TOMM70O94826 608 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms