RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 USPL1Q5W0Q7 1092 aa19.3■□□□□ 0.68
SMARCE1-209ENST00000478349 NEFMP07197 916 aa19.29■□□□□ 0.68
SMARCE1-209ENST00000478349 DDR1Q08345 913 aa19.29■□□□□ 0.68
SMARCE1-209ENST00000478349 DALRD3Q5D0E6 543 aaKnown RBP19.29■□□□□ 0.68
SMARCE1-209ENST00000478349 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
SMARCE1-209ENST00000478349 RTF1Q92541 710 aaKnown RBP19.29■□□□□ 0.68
SMARCE1-209ENST00000478349 FMNL2Q96PY5 1086 aa19.29■□□□□ 0.68
SMARCE1-209ENST00000478349 ZBTB1Q9Y2K1 713 aa19.29■□□□□ 0.68
SMARCE1-209ENST00000478349 POLRMTO00411 1230 aaKnown RBP19.28■□□□□ 0.68
SMARCE1-209ENST00000478349 U2AF1L5P0DN76 240 aaPredicted RBP19.28■□□□□ 0.68
SMARCE1-209ENST00000478349 U2AF1Q01081 240 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMARCE1-209ENST00000478349 ARHGAP27Q6ZUM4 889 aa19.28■□□□□ 0.68
SMARCE1-209ENST00000478349 ZNF526Q8TF50 670 aaPredicted RBP19.28■□□□□ 0.68
SMARCE1-209ENST00000478349 HEG1Q9ULI3 1381 aa19.28■□□□□ 0.68
SMARCE1-209ENST00000478349 MYH14Q7Z406 1995 aaKnown RBP19.28■□□□□ 0.68
SMARCE1-209ENST00000478349 PPP2R1AP30153 589 aa19.27■□□□□ 0.68
SMARCE1-209ENST00000478349 RSPH6AQ9H0K4 717 aa19.27■□□□□ 0.68
SMARCE1-209ENST00000478349 CEMIPQ8WUJ3 1361 aa19.27■□□□□ 0.68
SMARCE1-209ENST00000478349 CANXP27824 592 aaKnown RBP19.26■□□□□ 0.67
SMARCE1-209ENST00000478349 TM4SF1P30408 202 aa19.26■□□□□ 0.67
SMARCE1-209ENST00000478349 IL17REQ8NFR9 667 aa19.26■□□□□ 0.67
SMARCE1-209ENST00000478349 ZNF496Q96IT1 587 aaPredicted RBP19.26■□□□□ 0.67
SMARCE1-209ENST00000478349 BTBD11A6QL63 1104 aa19.24■□□□□ 0.67
SMARCE1-209ENST00000478349 NFIXQ14938 502 aa19.24■□□□□ 0.67
SMARCE1-209ENST00000478349 KIAA1551Q9HCM1 1747 aa19.24■□□□□ 0.67
SMARCE1-209ENST00000478349 UBR2Q8IWV8 1755 aa19.24■□□□□ 0.67
SMARCE1-209ENST00000478349 IL6STP40189 918 aaPredicted RBP19.23■□□□□ 0.67
SMARCE1-209ENST00000478349 EIF5P55010 431 aaKnown RBP19.23■□□□□ 0.67
SMARCE1-209ENST00000478349 ZNF330Q9Y3S2 320 aaPredicted RBP19.23■□□□□ 0.67
SMARCE1-209ENST00000478349 HTATSF1O43719 755 aaKnown RBP19.22■□□□□ 0.67
SMARCE1-209ENST00000478349 SERPINB2P05120 415 aa19.22■□□□□ 0.67
SMARCE1-209ENST00000478349 KCNA3P22001 575 aa19.22■□□□□ 0.67
SMARCE1-209ENST00000478349 PHACTR3Q96KR7 559 aa19.22■□□□□ 0.67
SMARCE1-209ENST00000478349 PDZRN3Q9UPQ7 1066 aa19.22■□□□□ 0.67
SMARCE1-209ENST00000478349 N4BP2Q86UW6 1770 aaPredicted RBP19.21■□□□□ 0.67
SMARCE1-209ENST00000478349 NPHP1O15259 732 aa19.2■□□□□ 0.66
SMARCE1-209ENST00000478349 CHRNA5P30532 468 aa19.2■□□□□ 0.66
SMARCE1-209ENST00000478349 PNNQ9H307 717 aaKnown RBP19.2■□□□□ 0.66
SMARCE1-209ENST00000478349 CARMIL3Q8ND23 1372 aa19.19■□□□□ 0.66
SMARCE1-209ENST00000478349 H0YIN7 160 aa19.18■□□□□ 0.66
SMARCE1-209ENST00000478349 C9orf131Q5VYM1 1079 aa19.18■□□□□ 0.66
SMARCE1-209ENST00000478349 BCL2L12Q9HB09 334 aa19.18■□□□□ 0.66
SMARCE1-209ENST00000478349 KDM2BQ8NHM5 1336 aa19.18■□□□□ 0.66
SMARCE1-209ENST00000478349 VIRMAQ69YN4 1812 aaKnown RBP19.17■□□□□ 0.66
SMARCE1-209ENST00000478349 SNRPA1P09661 255 aaKnown RBP19.17■□□□□ 0.66
SMARCE1-209ENST00000478349 HSPA6P17066 643 aa19.17■□□□□ 0.66
SMARCE1-209ENST00000478349 PDE6BP35913 854 aa19.17■□□□□ 0.66
SMARCE1-209ENST00000478349 BICDL1Q6ZP65 573 aa19.17■□□□□ 0.66
SMARCE1-209ENST00000478349 ZNF652Q9Y2D9 606 aa19.17■□□□□ 0.66
SMARCE1-209ENST00000478349 ZC3H4Q9UPT8 1303 aaKnown RBP19.17■□□□□ 0.66
SMARCE1-209ENST00000478349 MCM10Q7L590 875 aa19.16■□□□□ 0.66
SMARCE1-209ENST00000478349 C2CD5Q86YS7 1000 aa19.16■□□□□ 0.66
SMARCE1-209ENST00000478349 C16orf71Q8IYS4 520 aaPredicted RBP19.16■□□□□ 0.66
SMARCE1-209ENST00000478349 TTLL6Q8N841 843 aa19.16■□□□□ 0.66
SMARCE1-209ENST00000478349 RNF181Q9P0P0 153 aa19.16■□□□□ 0.66
SMARCE1-209ENST00000478349 KIF3CO14782 793 aa19.15■□□□□ 0.66
SMARCE1-209ENST00000478349 PNISRQ8TF01 805 aaKnown RBP19.15■□□□□ 0.66
SMARCE1-209ENST00000478349 SETDB2Q96T68 719 aa19.15■□□□□ 0.66
SMARCE1-209ENST00000478349 TBC1D2BQ9UPU7 963 aa19.15■□□□□ 0.66
SMARCE1-209ENST00000478349 ARFGEF1Q9Y6D6 1849 aa19.15■□□□□ 0.66
SMARCE1-209ENST00000478349 BRCA1P38398 1863 aaKnown RBP19.15■□□□□ 0.66
SMARCE1-209ENST00000478349 SCN7AQ01118 1682 aa19.14■□□□□ 0.66
SMARCE1-209ENST00000478349 SIPA1L3O60292 1781 aaPredicted RBP19.14■□□□□ 0.66
SMARCE1-209ENST00000478349 TOMM70O94826 608 aa19.14■□□□□ 0.65
SMARCE1-209ENST00000478349 ST5P78524 1137 aa19.14■□□□□ 0.65
SMARCE1-209ENST00000478349 DZIP3Q86Y13 1208 aaKnown RBP19.14■□□□□ 0.65
SMARCE1-209ENST00000478349 CNBD1Q8NA66 436 aa19.14■□□□□ 0.65
SMARCE1-209ENST00000478349 BRIP1Q9BX63 1249 aa19.14■□□□□ 0.65
SMARCE1-209ENST00000478349 MAPK8IP3Q9UPT6 1336 aa19.14■□□□□ 0.65
SMARCE1-209ENST00000478349 NRXN2Q9P2S2 1712 aa19.14■□□□□ 0.65
SMARCE1-209ENST00000478349 RGL2O15211 777 aa19.13■□□□□ 0.65
SMARCE1-209ENST00000478349 A1BGP04217 495 aa19.13■□□□□ 0.65
SMARCE1-209ENST00000478349 TAF7Q15545 349 aaPredicted RBP19.13■□□□□ 0.65
SMARCE1-209ENST00000478349 TBC1D9BQ66K14 1250 aa19.13■□□□□ 0.65
SMARCE1-209ENST00000478349 CLEC4GQ6UXB4 293 aa19.12■□□□□ 0.65
SMARCE1-209ENST00000478349 CAMTA2O94983 1202 aa19.11■□□□□ 0.65
SMARCE1-209ENST00000478349 LMNB1P20700 586 aa19.11■□□□□ 0.65
SMARCE1-209ENST00000478349 KCNQ3O43525 872 aa19.1■□□□□ 0.65
SMARCE1-209ENST00000478349 PRR5LQ6MZQ0 368 aa19.1■□□□□ 0.65
SMARCE1-209ENST00000478349 RALBP1Q15311 655 aa19.09■□□□□ 0.65
SMARCE1-209ENST00000478349 SOGA3Q5TF21 947 aa19.09■□□□□ 0.65
SMARCE1-209ENST00000478349 ZNF622Q969S3 477 aaKnown RBP eCLIP19.09■□□□□ 0.652e-13■□□□□ 10
SMARCE1-209ENST00000478349 USP16Q9Y5T5 823 aa19.09■□□□□ 0.65
SMARCE1-209ENST00000478349 APLP1P51693 650 aa19.08■□□□□ 0.64
SMARCE1-209ENST00000478349 DCTN1Q14203 1278 aa19.08■□□□□ 0.64
SMARCE1-209ENST00000478349 NFE2L2Q16236 605 aa19.08■□□□□ 0.64
SMARCE1-209ENST00000478349 NBPF5PQ86XG9 351 aaPredicted RBP19.08■□□□□ 0.64
SMARCE1-209ENST00000478349 RBM46Q8TBY0 533 aaKnown RBP19.08■□□□□ 0.64
SMARCE1-209ENST00000478349 CNKSR1Q969H4 720 aa19.08■□□□□ 0.64
SMARCE1-209ENST00000478349 NMRK2Q9NPI5 230 aa19.08■□□□□ 0.64
SMARCE1-209ENST00000478349 RASSF7Q02833 373 aa19.06■□□□□ 0.64
SMARCE1-209ENST00000478349 STYK1Q6J9G0 422 aa19.06■□□□□ 0.64
SMARCE1-209ENST00000478349 AFDNP55196 1824 aaKnown RBP19.06■□□□□ 0.64
SMARCE1-209ENST00000478349 DLEC1Q9Y238 1755 aa19.06■□□□□ 0.64
SMARCE1-209ENST00000478349 LMOD3Q0VAK6 560 aa19.05■□□□□ 0.64
SMARCE1-209ENST00000478349 FSTL1Q12841 308 aa19.05■□□□□ 0.64
SMARCE1-209ENST00000478349 MAPK8IP2Q13387 824 aaPredicted RBP19.05■□□□□ 0.64
SMARCE1-209ENST00000478349 TPTE2Q6XPS3 522 aa19.05■□□□□ 0.64
SMARCE1-209ENST00000478349 MASTLQ96GX5 879 aa19.04■□□□□ 0.64
SMARCE1-209ENST00000478349 PRAMEF22A3QJZ6 481 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms