RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 TM4SF1P30408 202 aa17.54■□□□□ 0.4
ABCF3-212ENST00000478288 PIM2Q9P1W9 311 aa17.54■□□□□ 0.4
ABCF3-212ENST00000478288 SBF1O95248 1867 aa17.54■□□□□ 0.4
ABCF3-212ENST00000478288 SLC39A6Q13433 755 aa17.53■□□□□ 0.4
ABCF3-212ENST00000478288 NARFQ9UHQ1 456 aa17.53■□□□□ 0.4
ABCF3-212ENST00000478288 DALRD3Q5D0E6 543 aaKnown RBP17.52■□□□□ 0.4
ABCF3-212ENST00000478288 USPL1Q5W0Q7 1092 aa17.52■□□□□ 0.4
ABCF3-212ENST00000478288 ARHGAP27Q6ZUM4 889 aa17.52■□□□□ 0.4
ABCF3-212ENST00000478288 GAS2L2Q8NHY3 880 aa17.52■□□□□ 0.4
ABCF3-212ENST00000478288 ZBTB1Q9Y2K1 713 aa17.51■□□□□ 0.39
ABCF3-212ENST00000478288 SCN7AQ01118 1682 aa17.49■□□□□ 0.39
ABCF3-212ENST00000478288 GNAT3A8MTJ3 354 aa17.49■□□□□ 0.39
ABCF3-212ENST00000478288 STARD3NLO95772 234 aa17.49■□□□□ 0.39
ABCF3-212ENST00000478288 TTC5Q8N0Z6 440 aa17.49■□□□□ 0.39
ABCF3-212ENST00000478288 TOMM70O94826 608 aa17.48■□□□□ 0.39
ABCF3-212ENST00000478288 NFIXQ14938 502 aa17.48■□□□□ 0.39
ABCF3-212ENST00000478288 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
ABCF3-212ENST00000478288 CEMIPQ8WUJ3 1361 aa17.48■□□□□ 0.39
ABCF3-212ENST00000478288 A0A087WZG4 1122 aa17.47■□□□□ 0.39
ABCF3-212ENST00000478288 EIF5P55010 431 aaKnown RBP17.47■□□□□ 0.39
ABCF3-212ENST00000478288 TEFQ10587 303 aa17.47■□□□□ 0.39
ABCF3-212ENST00000478288 C9orf131Q5VYM1 1079 aa17.47■□□□□ 0.39
ABCF3-212ENST00000478288 ZNF790Q6PG37 636 aa17.47■□□□□ 0.39
ABCF3-212ENST00000478288 BCL2L12Q9HB09 334 aa17.47■□□□□ 0.39
ABCF3-212ENST00000478288 HEG1Q9ULI3 1381 aa17.47■□□□□ 0.39
ABCF3-212ENST00000478288 TNRC6CQ9HCJ0 1690 aaKnown RBP17.47■□□□□ 0.39
ABCF3-212ENST00000478288 ZC3H4Q9UPT8 1303 aaKnown RBP17.47■□□□□ 0.39
ABCF3-212ENST00000478288 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
ABCF3-212ENST00000478288 CHRNA5P30532 468 aa17.46■□□□□ 0.39
ABCF3-212ENST00000478288 IL17REQ8NFR9 667 aa17.46■□□□□ 0.39
ABCF3-212ENST00000478288 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
ABCF3-212ENST00000478288 SERPINB2P05120 415 aa17.44■□□□□ 0.38
ABCF3-212ENST00000478288 CFAP53Q96M91 514 aa17.44■□□□□ 0.38
ABCF3-212ENST00000478288 ANKRD31Q8N7Z5 1873 aa17.44■□□□□ 0.38
ABCF3-212ENST00000478288 BCORQ6W2J9 1755 aa17.43■□□□□ 0.38
ABCF3-212ENST00000478288 CANXP27824 592 aaKnown RBP17.43■□□□□ 0.38
ABCF3-212ENST00000478288 IL6STP40189 918 aaPredicted RBP17.43■□□□□ 0.38
ABCF3-212ENST00000478288 APLP1P51693 650 aa17.43■□□□□ 0.38
ABCF3-212ENST00000478288 RSPH6AQ9H0K4 717 aa17.43■□□□□ 0.38
ABCF3-212ENST00000478288 NMRK2Q9NPI5 230 aa17.43■□□□□ 0.38
ABCF3-212ENST00000478288 PCNTO95613 3336 aa17.43■□□□□ 0.38
ABCF3-212ENST00000478288 KDM2BQ8NHM5 1336 aa17.43■□□□□ 0.38
ABCF3-212ENST00000478288 RBM46Q8TBY0 533 aaKnown RBP17.42■□□□□ 0.38
ABCF3-212ENST00000478288 FMNL2Q96PY5 1086 aa17.42■□□□□ 0.38
ABCF3-212ENST00000478288 RNF181Q9P0P0 153 aa17.42■□□□□ 0.38
ABCF3-212ENST00000478288 PDZRN3Q9UPQ7 1066 aa17.42■□□□□ 0.38
ABCF3-212ENST00000478288 CCDC88AQ3V6T2 1871 aa17.41■□□□□ 0.38
ABCF3-212ENST00000478288 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
ABCF3-212ENST00000478288 NUDCQ9Y266 331 aa17.41■□□□□ 0.38
ABCF3-212ENST00000478288 CARMIL3Q8ND23 1372 aa17.4■□□□□ 0.38
ABCF3-212ENST00000478288 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
ABCF3-212ENST00000478288 PHACTR3Q96KR7 559 aa17.4■□□□□ 0.38
ABCF3-212ENST00000478288 DICER1Q9UPY3 1922 aaKnown RBP17.39■□□□□ 0.37
ABCF3-212ENST00000478288 COL11A2P13942 1736 aaPredicted RBP17.39■□□□□ 0.37
ABCF3-212ENST00000478288 TIAM2Q8IVF5 1701 aa17.39■□□□□ 0.37
ABCF3-212ENST00000478288 WDR90Q96KV7 1748 aa17.39■□□□□ 0.37
ABCF3-212ENST00000478288 H0YIN7 160 aa17.39■□□□□ 0.37
ABCF3-212ENST00000478288 FER1L6Q2WGJ9 1857 aa17.39■□□□□ 0.37
ABCF3-212ENST00000478288 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
ABCF3-212ENST00000478288 LMNB1P20700 586 aa17.38■□□□□ 0.37
ABCF3-212ENST00000478288 FSTL1Q12841 308 aa17.38■□□□□ 0.37
ABCF3-212ENST00000478288 C2CD5Q86YS7 1000 aa17.38■□□□□ 0.37
ABCF3-212ENST00000478288 BRIP1Q9BX63 1249 aa17.38■□□□□ 0.37
ABCF3-212ENST00000478288 ARFGEF2Q9Y6D5 1785 aa17.38■□□□□ 0.37
ABCF3-212ENST00000478288 PPP2R1AP30153 589 aa17.37■□□□□ 0.37
ABCF3-212ENST00000478288 PDE6BP35913 854 aa17.37■□□□□ 0.37
ABCF3-212ENST00000478288 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
ABCF3-212ENST00000478288 C16orf71Q8IYS4 520 aaPredicted RBP17.37■□□□□ 0.37
ABCF3-212ENST00000478288 RGL2O15211 777 aa17.36■□□□□ 0.37
ABCF3-212ENST00000478288 HTATSF1O43719 755 aaKnown RBP17.36■□□□□ 0.37
ABCF3-212ENST00000478288 CNGB1Q14028 1251 aaPredicted RBP17.36■□□□□ 0.37
ABCF3-212ENST00000478288 NPM2Q86SE8 214 aaKnown RBP17.36■□□□□ 0.37
ABCF3-212ENST00000478288 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
ABCF3-212ENST00000478288 U2AF1L5P0DN76 240 aaPredicted RBP17.35■□□□□ 0.37
ABCF3-212ENST00000478288 U2AF1Q01081 240 aaKnown RBP eCLIP17.35■□□□□ 0.37
ABCF3-212ENST00000478288 RASSF7Q02833 373 aa17.35■□□□□ 0.37
ABCF3-212ENST00000478288 IFFO2Q5TF58 517 aa17.35■□□□□ 0.37
ABCF3-212ENST00000478288 PRR5LQ6MZQ0 368 aa17.35■□□□□ 0.37
ABCF3-212ENST00000478288 BICDL1Q6ZP65 573 aa17.35■□□□□ 0.37
ABCF3-212ENST00000478288 TBC1D2BQ9UPU7 963 aa17.35■□□□□ 0.37
ABCF3-212ENST00000478288 LAMB4A4D0S4 1761 aa17.34■□□□□ 0.37
ABCF3-212ENST00000478288 DNAJC5GQ8N7S2 189 aa17.34■□□□□ 0.37
ABCF3-212ENST00000478288 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
ABCF3-212ENST00000478288 NFKBIEO00221 500 aa17.33■□□□□ 0.36
ABCF3-212ENST00000478288 KCNQ3O43525 872 aa17.33■□□□□ 0.36
ABCF3-212ENST00000478288 A1BGP04217 495 aa17.33■□□□□ 0.36
ABCF3-212ENST00000478288 SNRPA1P09661 255 aaKnown RBP17.33■□□□□ 0.36
ABCF3-212ENST00000478288 CLEC4GQ6UXB4 293 aa17.33■□□□□ 0.36
ABCF3-212ENST00000478288 CNBD1Q8NA66 436 aa17.33■□□□□ 0.36
ABCF3-212ENST00000478288 SETDB2Q96T68 719 aa17.33■□□□□ 0.36
ABCF3-212ENST00000478288 ZNF330Q9Y3S2 320 aaPredicted RBP17.33■□□□□ 0.36
ABCF3-212ENST00000478288 DLG5Q8TDM6 1919 aa17.33■□□□□ 0.36
ABCF3-212ENST00000478288 LTBP3Q9NS15 1303 aa17.32■□□□□ 0.36
ABCF3-212ENST00000478288 GLTPD2A6NH11 291 aa17.32■□□□□ 0.36
ABCF3-212ENST00000478288 PRELPP51888 382 aa17.32■□□□□ 0.36
ABCF3-212ENST00000478288 DZIP3Q86Y13 1208 aaKnown RBP17.32■□□□□ 0.36
ABCF3-212ENST00000478288 RRAGCQ9HB90 399 aa17.32■□□□□ 0.36
ABCF3-212ENST00000478288 CACNA1SQ13698 1873 aa17.32■□□□□ 0.36
ABCF3-212ENST00000478288 SLX4Q8IY92 1834 aa17.31■□□□□ 0.36
ABCF3-212ENST00000478288 ST5P78524 1137 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms