RNA–Protein interactions for RNA: ENST00000478087.5

HPS1-211, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 971 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-211ENST00000478087 USPL1Q5W0Q7 1092 aa17.38■□□□□ 0.37
HPS1-211ENST00000478087 TTC5Q8N0Z6 440 aa17.37■□□□□ 0.37
HPS1-211ENST00000478087 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
HPS1-211ENST00000478087 PARP3Q9Y6F1 533 aa17.37■□□□□ 0.37
HPS1-211ENST00000478087 BRCA1P38398 1863 aaKnown RBP17.36■□□□□ 0.37
HPS1-211ENST00000478087 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
HPS1-211ENST00000478087 GRIN3BO60391 1043 aa17.36■□□□□ 0.37
HPS1-211ENST00000478087 PRAMEF22A3QJZ6 481 aa17.35■□□□□ 0.37
HPS1-211ENST00000478087 TM4SF1P30408 202 aa17.35■□□□□ 0.37
HPS1-211ENST00000478087 BCL2L12Q9HB09 334 aa17.35■□□□□ 0.37
HPS1-211ENST00000478087 HEG1Q9ULI3 1381 aa17.35■□□□□ 0.37
HPS1-211ENST00000478087 PXDNLA1KZ92 1463 aa17.35■□□□□ 0.37
HPS1-211ENST00000478087 ZPR1O75312 459 aa17.34■□□□□ 0.37
HPS1-211ENST00000478087 A1BGP04217 495 aa17.34■□□□□ 0.37
HPS1-211ENST00000478087 DPEP1P16444 411 aa17.34■□□□□ 0.37
HPS1-211ENST00000478087 COL15A1P39059 1388 aa17.34■□□□□ 0.37
HPS1-211ENST00000478087 C10orf71Q711Q0 1435 aa17.34■□□□□ 0.37
HPS1-211ENST00000478087 PLEKHF1Q96S99 279 aa17.34■□□□□ 0.37
HPS1-211ENST00000478087 MIS18AQ9NYP9 233 aa17.34■□□□□ 0.37
HPS1-211ENST00000478087 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
HPS1-211ENST00000478087 RTF1Q92541 710 aaKnown RBP17.33■□□□□ 0.36
HPS1-211ENST00000478087 NARFQ9UHQ1 456 aa17.33■□□□□ 0.36
HPS1-211ENST00000478087 USP16Q9Y5T5 823 aa17.33■□□□□ 0.36
HPS1-211ENST00000478087 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
HPS1-211ENST00000478087 STARD3NLO95772 234 aa17.32■□□□□ 0.36
HPS1-211ENST00000478087 KCNA3P22001 575 aa17.32■□□□□ 0.36
HPS1-211ENST00000478087 EIF5P55010 431 aaKnown RBP17.32■□□□□ 0.36
HPS1-211ENST00000478087 TGFB2P61812 414 aa17.32■□□□□ 0.36
HPS1-211ENST00000478087 NFIXQ14938 502 aa17.32■□□□□ 0.36
HPS1-211ENST00000478087 FMNL2Q96PY5 1086 aa17.32■□□□□ 0.36
HPS1-211ENST00000478087 THUMPD2Q9BTF0 503 aaKnown RBP17.31■□□□□ 0.36
HPS1-211ENST00000478087 TBC1D2BQ9UPU7 963 aa17.31■□□□□ 0.36
HPS1-211ENST00000478087 ZNF330Q9Y3S2 320 aaPredicted RBP17.31■□□□□ 0.36
HPS1-211ENST00000478087 BCS1LQ9Y276 419 aa17.3■□□□□ 0.36
HPS1-211ENST00000478087 CHRNA5P30532 468 aa17.29■□□□□ 0.36
HPS1-211ENST00000478087 RALBP1Q15311 655 aa17.29■□□□□ 0.36
HPS1-211ENST00000478087 BICDL1Q6ZP65 573 aa17.29■□□□□ 0.36
HPS1-211ENST00000478087 NRXN2Q9P2S2 1712 aa17.28■□□□□ 0.36
HPS1-211ENST00000478087 HTATSF1O43719 755 aaKnown RBP17.28■□□□□ 0.36
HPS1-211ENST00000478087 TAF7Q15545 349 aaPredicted RBP17.28■□□□□ 0.36
HPS1-211ENST00000478087 TEX13AQ9BXU3 409 aaPredicted RBP17.28■□□□□ 0.36
HPS1-211ENST00000478087 ARFGEF1Q9Y6D6 1849 aa17.27■□□□□ 0.36
HPS1-211ENST00000478087 NFE2L2Q16236 605 aa17.27■□□□□ 0.36
HPS1-211ENST00000478087 KDM3BQ7LBC6 1761 aa17.26■□□□□ 0.35
HPS1-211ENST00000478087 SERPINB2P05120 415 aa17.26■□□□□ 0.35
HPS1-211ENST00000478087 TBC1D9BQ66K14 1250 aa17.26■□□□□ 0.35
HPS1-211ENST00000478087 CCDC24Q8N4L8 307 aa17.26■□□□□ 0.35
HPS1-211ENST00000478087 ANKRD31Q8N7Z5 1873 aa17.25■□□□□ 0.35
HPS1-211ENST00000478087 IL6STP40189 918 aaPredicted RBP17.25■□□□□ 0.35
HPS1-211ENST00000478087 SCN7AQ01118 1682 aa17.24■□□□□ 0.35
HPS1-211ENST00000478087 A0A087WZG4 1122 aa17.24■□□□□ 0.35
HPS1-211ENST00000478087 NBPF26B4DH59 902 aa17.24■□□□□ 0.35
HPS1-211ENST00000478087 NEFMP07197 916 aa17.24■□□□□ 0.35
HPS1-211ENST00000478087 SNRPA1P09661 255 aaKnown RBP17.24■□□□□ 0.35
HPS1-211ENST00000478087 NBPF10Q6P3W6 841 aaKnown RBP17.24■□□□□ 0.35
HPS1-211ENST00000478087 ARHGAP27Q6ZUM4 889 aa17.24■□□□□ 0.35
HPS1-211ENST00000478087 NBPF15Q8N660 670 aa17.24■□□□□ 0.35
HPS1-211ENST00000478087 ZNF526Q8TF50 670 aaPredicted RBP17.24■□□□□ 0.35
HPS1-211ENST00000478087 SBF1O95248 1867 aa17.24■□□□□ 0.35
HPS1-211ENST00000478087 CARMIL3Q8ND23 1372 aa17.24■□□□□ 0.35
HPS1-211ENST00000478087 ATP10DQ9P241 1426 aa17.23■□□□□ 0.35
HPS1-211ENST00000478087 BCORQ6W2J9 1755 aa17.23■□□□□ 0.35
HPS1-211ENST00000478087 CAMTA2O94983 1202 aa17.23■□□□□ 0.35
HPS1-211ENST00000478087 CCDC146Q8IYE0 955 aa17.23■□□□□ 0.35
HPS1-211ENST00000478087 PIM2Q9P1W9 311 aa17.23■□□□□ 0.35
HPS1-211ENST00000478087 MYBBP1AQ9BQG0 1328 aaKnown RBP17.22■□□□□ 0.35
HPS1-211ENST00000478087 CCDC88AQ3V6T2 1871 aa17.22■□□□□ 0.35
HPS1-211ENST00000478087 RRP7AQ9Y3A4 280 aaKnown RBP17.22■□□□□ 0.35
HPS1-211ENST00000478087 MAPK8IP3Q9UPT6 1336 aa17.21■□□□□ 0.35
HPS1-211ENST00000478087 DLEC1Q9Y238 1755 aa17.21■□□□□ 0.35
HPS1-211ENST00000478087 ADCY9O60503 1353 aa17.21■□□□□ 0.35
HPS1-211ENST00000478087 RIPK4P57078 832 aa17.21■□□□□ 0.35
HPS1-211ENST00000478087 DZIP3Q86Y13 1208 aaKnown RBP17.21■□□□□ 0.35
HPS1-211ENST00000478087 EIF4A1P60842 406 aaKnown RBP17.2■□□□□ 0.34
HPS1-211ENST00000478087 DALRD3Q5D0E6 543 aaKnown RBP17.2■□□□□ 0.34
HPS1-211ENST00000478087 CACNA1SQ13698 1873 aa17.2■□□□□ 0.34
HPS1-211ENST00000478087 LAMB4A4D0S4 1761 aa17.2■□□□□ 0.34
HPS1-211ENST00000478087 TMPOP42166 694 aaKnown RBP17.19■□□□□ 0.34
HPS1-211ENST00000478087 C1QTNF8P60827 252 aa17.19■□□□□ 0.34
HPS1-211ENST00000478087 NEUROD2Q15784 382 aa17.19■□□□□ 0.34
HPS1-211ENST00000478087 PNNQ9H307 717 aaKnown RBP17.19■□□□□ 0.34
HPS1-211ENST00000478087 NUP98P52948 1817 aa17.19■□□□□ 0.34
HPS1-211ENST00000478087 GIGYF1O75420 1035 aaPredicted RBP17.18■□□□□ 0.34
HPS1-211ENST00000478087 PRR5LQ6MZQ0 368 aa17.18■□□□□ 0.34
HPS1-211ENST00000478087 C2CD5Q86YS7 1000 aa17.18■□□□□ 0.34
HPS1-211ENST00000478087 NGEFQ8N5V2 710 aa17.18■□□□□ 0.34
HPS1-211ENST00000478087 PRKRIP1Q9H875 184 aaPredicted RBP17.18■□□□□ 0.34
HPS1-211ENST00000478087 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
HPS1-211ENST00000478087 ZNF316A6NFI3 1004 aaPredicted RBP17.17■□□□□ 0.34
HPS1-211ENST00000478087 COL11A2P13942 1736 aaPredicted RBP17.17■□□□□ 0.34
HPS1-211ENST00000478087 NPM2Q86SE8 214 aaKnown RBP17.17■□□□□ 0.34
HPS1-211ENST00000478087 SETDB2Q96T68 719 aa17.17■□□□□ 0.34
HPS1-211ENST00000478087 HLFQ16534 295 aa17.16■□□□□ 0.34
HPS1-211ENST00000478087 PNISRQ8TF01 805 aaKnown RBP17.16■□□□□ 0.34
HPS1-211ENST00000478087 GPBP1L1Q9HC44 474 aaPredicted RBP17.16■□□□□ 0.34
HPS1-211ENST00000478087 SLX4Q8IY92 1834 aa17.14■□□□□ 0.34
HPS1-211ENST00000478087 H0YIN7 160 aa17.14■□□□□ 0.33
HPS1-211ENST00000478087 C9orf131Q5VYM1 1079 aa17.14■□□□□ 0.33
HPS1-211ENST00000478087 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
HPS1-211ENST00000478087 TRIM35Q9UPQ4 493 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms