RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 NR1H3Q13133 447 aa8.98□□□□□ -0.97
NCKAP1-204ENST00000477988 NLRP8Q86W28 1048 aa8.98□□□□□ -0.97
NCKAP1-204ENST00000477988 TNP2Q05952 138 aa8.96□□□□□ -0.98
NCKAP1-204ENST00000477988 ESCO1Q5FWF5 840 aa8.96□□□□□ -0.98
NCKAP1-204ENST00000477988 PCMTD1Q96MG8 357 aaPredicted RBP8.96□□□□□ -0.98
NCKAP1-204ENST00000477988 CDCA7Q9BWT1 371 aaPredicted RBP8.96□□□□□ -0.98
NCKAP1-204ENST00000477988 ATXN7O15265 892 aaPredicted RBP8.95□□□□□ -0.98
NCKAP1-204ENST00000477988 MAPTP10636 758 aaKnown RBP8.95□□□□□ -0.98
NCKAP1-204ENST00000477988 ATP4AP20648 1035 aa8.95□□□□□ -0.98
NCKAP1-204ENST00000477988 PRSS36Q5K4E3 855 aa8.95□□□□□ -0.98
NCKAP1-204ENST00000477988 NBPF11Q86T75 865 aa8.95□□□□□ -0.98
NCKAP1-204ENST00000477988 ZNF330Q9Y3S2 320 aaPredicted RBP8.95□□□□□ -0.98
NCKAP1-204ENST00000477988 MYCP01106 439 aaPredicted RBP8.94□□□□□ -0.98
NCKAP1-204ENST00000477988 TBC1D9Q6ZT07 1266 aa8.94□□□□□ -0.98
NCKAP1-204ENST00000477988 C1orf216Q8TAB5 229 aa8.94□□□□□ -0.98
NCKAP1-204ENST00000477988 CD33P20138 364 aa8.93□□□□□ -0.98
NCKAP1-204ENST00000477988 CCDC85AQ96PX6 553 aaPredicted RBP8.93□□□□□ -0.98
NCKAP1-204ENST00000477988 SPDYE3A6NKU9 549 aa8.92□□□□□ -0.98
NCKAP1-204ENST00000477988 ZNF468Q5VIY5 522 aaPredicted RBP8.92□□□□□ -0.98
NCKAP1-204ENST00000477988 GOLGA2P5Q9HBQ8 144 aa8.92□□□□□ -0.98
NCKAP1-204ENST00000477988 ETNK1Q9HBU6 452 aa8.92□□□□□ -0.98
NCKAP1-204ENST00000477988 DCDC2BA2VCK2 349 aa8.91□□□□□ -0.98
NCKAP1-204ENST00000477988 APBA3O96018 575 aa8.91□□□□□ -0.98
NCKAP1-204ENST00000477988 PLA2G4AP47712 749 aa8.91□□□□□ -0.98
NCKAP1-204ENST00000477988 PCBP4P57723 403 aaKnown RBP8.91□□□□□ -0.98
NCKAP1-204ENST00000477988 PRRT3Q5FWE3 981 aa8.91□□□□□ -0.98
NCKAP1-204ENST00000477988 MDFIQ99750 246 aa8.91□□□□□ -0.98
NCKAP1-204ENST00000477988 SOCS7O14512 581 aa8.9□□□□□ -0.98
NCKAP1-204ENST00000477988 LRP8Q14114 963 aa8.9□□□□□ -0.98
NCKAP1-204ENST00000477988 TLR1Q15399 786 aa8.9□□□□□ -0.98
NCKAP1-204ENST00000477988 ELOA3CA0A087WX78 387 aaPredicted RBP8.89□□□□□ -0.99
NCKAP1-204ENST00000477988 ELOA3DA6NLF2 546 aaPredicted RBP8.89□□□□□ -0.99
NCKAP1-204ENST00000477988 GPR37L1O60883 481 aa8.89□□□□□ -0.99
NCKAP1-204ENST00000477988 STAU1O95793 577 aaKnown RBP8.89□□□□□ -0.99
NCKAP1-204ENST00000477988 COL9A3Q14050 684 aaPredicted RBP8.89□□□□□ -0.99
NCKAP1-204ENST00000477988 ELOA3BQ3SY89 546 aa8.89□□□□□ -0.99
NCKAP1-204ENST00000477988 ELOA3Q8NG57 546 aa8.89□□□□□ -0.99
NCKAP1-204ENST00000477988 CEP126Q9P2H0 1117 aa8.89□□□□□ -0.99
NCKAP1-204ENST00000477988 A0A1W2PNR3 127 aa8.88□□□□□ -0.99
NCKAP1-204ENST00000477988 KHNYNO15037 678 aaKnown RBP8.88□□□□□ -0.99
NCKAP1-204ENST00000477988 FAM157BP0CG42 384 aa8.87□□□□□ -0.99
NCKAP1-204ENST00000477988 BANK1Q8NDB2 785 aa8.87□□□□□ -0.99
NCKAP1-204ENST00000477988 HYAL3O43820 417 aaPredicted RBP8.86□□□□□ -0.99
NCKAP1-204ENST00000477988 H2AFB1P0C5Y9 115 aa8.86□□□□□ -0.99
NCKAP1-204ENST00000477988 H2AFB2P0C5Z0 115 aa8.86□□□□□ -0.99
NCKAP1-204ENST00000477988 NACC1Q96RE7 527 aa8.86□□□□□ -0.99
NCKAP1-204ENST00000477988 PRR12Q9ULL5 1215 aa8.86□□□□□ -0.99
NCKAP1-204ENST00000477988 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
NCKAP1-204ENST00000477988 ZNF295-AS1Q8N0V1 137 aa8.85□□□□□ -0.99
NCKAP1-204ENST00000477988 NIFKQ9BYG3 293 aaKnown RBP8.85□□□□□ -0.99
NCKAP1-204ENST00000477988 PRDM6Q9NQX0 595 aa8.85□□□□□ -0.99
NCKAP1-204ENST00000477988 ALAS2P22557 587 aa8.84□□□□□ -0.99
NCKAP1-204ENST00000477988 AIDAQ96BJ3 306 aa8.84□□□□□ -0.99
NCKAP1-204ENST00000477988 STRN4Q9NRL3 753 aa8.84□□□□□ -0.99
NCKAP1-204ENST00000477988 NDUFB9Q9Y6M9 179 aa8.84□□□□□ -0.99
NCKAP1-204ENST00000477988 APBB1O00213 710 aa8.83□□□□□ -1
NCKAP1-204ENST00000477988 EFSO43281 561 aa8.83□□□□□ -1
NCKAP1-204ENST00000477988 USP4Q13107 963 aa8.83□□□□□ -1
NCKAP1-204ENST00000477988 LAMC2Q13753 1193 aa8.83□□□□□ -1
NCKAP1-204ENST00000477988 TSGA10IPQ3SY00 556 aa8.83□□□□□ -1
NCKAP1-204ENST00000477988 SAMD5Q5TGI4 173 aa8.83□□□□□ -1
NCKAP1-204ENST00000477988 ZIC5Q96T25 663 aa8.83□□□□□ -1
NCKAP1-204ENST00000477988 MARK1Q9P0L2 795 aa8.83□□□□□ -1
NCKAP1-204ENST00000477988 ADARB2-AS1A8MUL3 147 aa8.82□□□□□ -1
NCKAP1-204ENST00000477988 SCNN1DP51172 638 aa8.82□□□□□ -1
NCKAP1-204ENST00000477988 TRIM28Q13263 835 aaKnown RBP8.82□□□□□ -1
NCKAP1-204ENST00000477988 ARSJQ5FYB0 599 aaPredicted RBP8.82□□□□□ -1
NCKAP1-204ENST00000477988 INHAP05111 366 aa8.81□□□□□ -1
NCKAP1-204ENST00000477988 GRIK4Q16099 956 aa8.81□□□□□ -1
NCKAP1-204ENST00000477988 SYT9Q86SS6 491 aa8.81□□□□□ -1
NCKAP1-204ENST00000477988 PHTF2Q8N3S3 785 aa8.81□□□□□ -1
NCKAP1-204ENST00000477988 ZDHHC3Q9NYG2 299 aa8.81□□□□□ -1
NCKAP1-204ENST00000477988 STARD13Q9Y3M8 1113 aa8.81□□□□□ -1
NCKAP1-204ENST00000477988 M0R082 166 aa8.8□□□□□ -1
NCKAP1-204ENST00000477988 SIN3BO75182 1162 aa8.8□□□□□ -1
NCKAP1-204ENST00000477988 ZNF417Q8TAU3 575 aa8.8□□□□□ -1
NCKAP1-204ENST00000477988 ZNF587Q96SQ5 575 aaPredicted RBP8.8□□□□□ -1
NCKAP1-204ENST00000477988 NID1P14543 1247 aa8.79□□□□□ -1
NCKAP1-204ENST00000477988 SMTNP53814 917 aa8.79□□□□□ -1
NCKAP1-204ENST00000477988 ADGRE1Q14246 886 aa8.79□□□□□ -1
NCKAP1-204ENST00000477988 NBPF1Q3BBV0 1214 aa8.79□□□□□ -1
NCKAP1-204ENST00000477988 C9orf172C9J069 976 aa8.78□□□□□ -1
NCKAP1-204ENST00000477988 GDF10P55107 478 aa8.78□□□□□ -1
NCKAP1-204ENST00000477988 MICALL1Q8N3F8 863 aa8.78□□□□□ -1
NCKAP1-204ENST00000477988 MTMR14Q8NCE2 650 aa8.78□□□□□ -1
NCKAP1-204ENST00000477988 DOLKQ9UPQ8 538 aa8.78□□□□□ -1
NCKAP1-204ENST00000477988 ALBP02768 609 aa8.77□□□□□ -1.01
NCKAP1-204ENST00000477988 TATP17735 454 aaPredicted RBP8.77□□□□□ -1.01
NCKAP1-204ENST00000477988 MBTPS1Q14703 1052 aa8.77□□□□□ -1.01
NCKAP1-204ENST00000477988 C8orf86Q6ZUL3 223 aa8.77□□□□□ -1.01
NCKAP1-204ENST00000477988 IL27Q8NEV9 243 aa8.77□□□□□ -1.01
NCKAP1-204ENST00000477988 TNFRSF25Q93038 417 aa8.77□□□□□ -1.01
NCKAP1-204ENST00000477988 CHIC2Q9UKJ5 165 aa8.77□□□□□ -1.01
NCKAP1-204ENST00000477988 IQSEC3Q9UPP2 1182 aaPredicted RBP8.77□□□□□ -1.01
NCKAP1-204ENST00000477988 BCANQ96GW7 911 aa8.76□□□□□ -1.01
NCKAP1-204ENST00000477988 SELPP16109 830 aa8.75□□□□□ -1.01
NCKAP1-204ENST00000477988 MTFR1Q15390 333 aa8.75□□□□□ -1.01
NCKAP1-204ENST00000477988 SIRT1Q96EB6 747 aa8.75□□□□□ -1.01
NCKAP1-204ENST00000477988 GJA3Q9Y6H8 435 aa8.75□□□□□ -1.01
NCKAP1-204ENST00000477988 CDK2AP1O14519 115 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms