RNA–Protein interactions for RNA: ENST00000477772.1

COL11A2-206, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 2

Gene COL11A2, Length 1,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-206ENST00000477772 LOC102724428A0A0B4J2F2 783 aa20.62■□□□□ 0.89
COL11A2-206ENST00000477772 BCAR3O75815 825 aa20.62■□□□□ 0.89
COL11A2-206ENST00000477772 KCNQ4P56696 695 aa20.62■□□□□ 0.89
COL11A2-206ENST00000477772 SIK1P57059 783 aa20.62■□□□□ 0.89
COL11A2-206ENST00000477772 CCDC125Q86Z20 511 aa20.62■□□□□ 0.89
COL11A2-206ENST00000477772 FMNL2Q96PY5 1086 aa20.62■□□□□ 0.89
COL11A2-206ENST00000477772 PRAMEF22A3QJZ6 481 aa20.61■□□□□ 0.89
COL11A2-206ENST00000477772 DEFB132Q7Z7B7 95 aa20.61■□□□□ 0.89
COL11A2-206ENST00000477772 RGPD3A6NKT7 1758 aaPredicted RBP20.61■□□□□ 0.89
COL11A2-206ENST00000477772 RGPD4Q7Z3J3 1758 aa20.61■□□□□ 0.89
COL11A2-206ENST00000477772 C5P01031 1676 aa20.61■□□□□ 0.89
COL11A2-206ENST00000477772 EN1Q05925 392 aaPredicted RBP20.61■□□□□ 0.89
COL11A2-206ENST00000477772 C8orf58Q8NAV2 365 aa20.61■□□□□ 0.89
COL11A2-206ENST00000477772 TJP1Q07157 1748 aa20.6■□□□□ 0.89
COL11A2-206ENST00000477772 SF3B2Q13435 895 aaKnown RBP20.6■□□□□ 0.89
COL11A2-206ENST00000477772 CAMKK2Q96RR4 588 aa20.6■□□□□ 0.89
COL11A2-206ENST00000477772 LRRC4BQ9NT99 713 aa20.6■□□□□ 0.89
COL11A2-206ENST00000477772 ZNF831Q5JPB2 1677 aa20.6■□□□□ 0.89
COL11A2-206ENST00000477772 GIGYF1O75420 1035 aaPredicted RBP20.59■□□□□ 0.89
COL11A2-206ENST00000477772 TSPYL6Q8N831 410 aa20.59■□□□□ 0.89
COL11A2-206ENST00000477772 EXOSC9Q06265 439 aaKnown RBP20.59■□□□□ 0.89
COL11A2-206ENST00000477772 ITPK1Q13572 414 aa20.59■□□□□ 0.89
COL11A2-206ENST00000477772 TXNRD1Q16881 649 aa20.59■□□□□ 0.89
COL11A2-206ENST00000477772 ELL2O00472 640 aaPredicted RBP20.58■□□□□ 0.89
COL11A2-206ENST00000477772 ATP6V1AP38606 617 aa20.58■□□□□ 0.89
COL11A2-206ENST00000477772 EZH2Q15910 746 aaKnown RBP20.58■□□□□ 0.89
COL11A2-206ENST00000477772 VSIG10Q8N0Z9 540 aa20.58■□□□□ 0.89
COL11A2-206ENST00000477772 ARXQ96QS3 562 aa20.58■□□□□ 0.89
COL11A2-206ENST00000477772 CCNL1Q9UK58 526 aaPredicted RBP20.58■□□□□ 0.89
COL11A2-206ENST00000477772 CICQ96RK0 1608 aaPredicted RBP20.58■□□□□ 0.89
COL11A2-206ENST00000477772 TAF1LQ8IZX4 1826 aa20.58■□□□□ 0.88
COL11A2-206ENST00000477772 BAG6P46379 1132 aa20.57■□□□□ 0.88
COL11A2-206ENST00000477772 DDRGK1Q96HY6 314 aa20.57■□□□□ 0.88
COL11A2-206ENST00000477772 SNRPA1P09661 255 aaKnown RBP20.57■□□□□ 0.88
COL11A2-206ENST00000477772 DNAJC10Q8IXB1 793 aa20.57■□□□□ 0.88
COL11A2-206ENST00000477772 PLCB2Q00722 1185 aa20.56■□□□□ 0.88
COL11A2-206ENST00000477772 USP16Q9Y5T5 823 aa20.56■□□□□ 0.88
COL11A2-206ENST00000477772 COL5A3P25940 1745 aaPredicted RBP20.56■□□□□ 0.88
COL11A2-206ENST00000477772 CT47B1P0C2W7 299 aaPredicted RBP20.55■□□□□ 0.88
COL11A2-206ENST00000477772 CANXP27824 592 aaKnown RBP20.55■□□□□ 0.88
COL11A2-206ENST00000477772 RARSP54136 660 aaKnown RBP20.55■□□□□ 0.88
COL11A2-206ENST00000477772 FAM161AQ3B820 660 aa20.55■□□□□ 0.88
COL11A2-206ENST00000477772 SLC27A3Q5K4L6 730 aa20.55■□□□□ 0.88
COL11A2-206ENST00000477772 NPM2Q86SE8 214 aaKnown RBP20.55■□□□□ 0.88
COL11A2-206ENST00000477772 RREB1Q92766 1687 aa20.55■□□□□ 0.88
COL11A2-206ENST00000477772 LINC00116Q8NCU8 138 aa20.54■□□□□ 0.88
COL11A2-206ENST00000477772 LAMB4A4D0S4 1761 aa20.54■□□□□ 0.88
COL11A2-206ENST00000477772 MYH14Q7Z406 1995 aaKnown RBP20.53■□□□□ 0.88
COL11A2-206ENST00000477772 TWISTNBQ3B726 338 aaPredicted RBP20.53■□□□□ 0.88
COL11A2-206ENST00000477772 CLUAP1Q96AJ1 413 aa20.53■□□□□ 0.88
COL11A2-206ENST00000477772 VAMP4O75379 141 aa20.52■□□□□ 0.88
COL11A2-206ENST00000477772 CYP19A1P11511 503 aaPredicted RBP20.52■□□□□ 0.88
COL11A2-206ENST00000477772 HOXB7P09629 217 aa20.51■□□□□ 0.87
COL11A2-206ENST00000477772 TEX13AQ9BXU3 409 aaPredicted RBP20.51■□□□□ 0.87
COL11A2-206ENST00000477772 NUP188Q5SRE5 1749 aa20.51■□□□□ 0.87
COL11A2-206ENST00000477772 EIF2S2P20042 333 aaKnown RBP20.5■□□□□ 0.87
COL11A2-206ENST00000477772 NECTIN2Q92692 538 aa20.5■□□□□ 0.87
COL11A2-206ENST00000477772 C4BP0C0L5 1744 aa20.5■□□□□ 0.87
COL11A2-206ENST00000477772 SKAP1Q86WV1 359 aa20.5■□□□□ 0.87
COL11A2-206ENST00000477772 A1BGP04217 495 aa20.49■□□□□ 0.87
COL11A2-206ENST00000477772 STARD3NLO95772 234 aa20.48■□□□□ 0.87
COL11A2-206ENST00000477772 INTS5Q6P9B9 1019 aaKnown RBP20.48■□□□□ 0.87
COL11A2-206ENST00000477772 SOS1Q07889 1333 aaPredicted RBP20.48■□□□□ 0.87
COL11A2-206ENST00000477772 CRKLP46109 303 aaKnown RBP20.48■□□□□ 0.87
COL11A2-206ENST00000477772 PIP4K2AP48426 406 aaPredicted RBP20.48■□□□□ 0.87
COL11A2-206ENST00000477772 C8orf34Q49A92 452 aa20.48■□□□□ 0.87
COL11A2-206ENST00000477772 HDGFL1Q5TGJ6 251 aa20.48■□□□□ 0.87
COL11A2-206ENST00000477772 PANK1Q8TE04 598 aa20.47■□□□□ 0.87
COL11A2-206ENST00000477772 NBPF26B4DH59 902 aa20.46■□□□□ 0.87
COL11A2-206ENST00000477772 NBPF14Q5TI25 921 aa20.46■□□□□ 0.87
COL11A2-206ENST00000477772 NBPF10Q6P3W6 841 aaKnown RBP20.46■□□□□ 0.87
COL11A2-206ENST00000477772 NBPF15Q8N660 670 aa20.46■□□□□ 0.87
COL11A2-206ENST00000477772 ZBTB1Q9Y2K1 713 aa20.46■□□□□ 0.87
COL11A2-206ENST00000477772 COG6Q9Y2V7 657 aa20.46■□□□□ 0.87
COL11A2-206ENST00000477772 PDIA6Q15084 440 aa20.46■□□□□ 0.87
COL11A2-206ENST00000477772 CNTNAP4Q9C0A0 1308 aa20.46■□□□□ 0.87
COL11A2-206ENST00000477772 NPM3O75607 178 aaKnown RBP20.45■□□□□ 0.86
COL11A2-206ENST00000477772 ZNF827Q17R98 1081 aa20.45■□□□□ 0.86
COL11A2-206ENST00000477772 PROSER3Q2NL68 480 aa20.45■□□□□ 0.86
COL11A2-206ENST00000477772 PPP4R3CPQ6ZMV5 832 aa20.45■□□□□ 0.86
COL11A2-206ENST00000477772 AMIGO3Q86WK7 504 aa20.45■□□□□ 0.86
COL11A2-206ENST00000477772 CCDC87Q9NVE4 849 aa20.45■□□□□ 0.86
COL11A2-206ENST00000477772 ANXA1P04083 346 aa20.45■□□□□ 0.86
COL11A2-206ENST00000477772 RC3H1Q5TC82 1133 aaKnown RBP20.45■□□□□ 0.86
COL11A2-206ENST00000477772 FRAT1Q92837 279 aaPredicted RBP20.45■□□□□ 0.86
COL11A2-206ENST00000477772 AKT1S1Q96B36 256 aa20.45■□□□□ 0.86
COL11A2-206ENST00000477772 ANO8Q9HCE9 1232 aaPredicted RBP20.45■□□□□ 0.86
COL11A2-206ENST00000477772 CHPF2Q9P2E5 772 aa20.45■□□□□ 0.86
COL11A2-206ENST00000477772 IGHDP01880 384 aa20.44■□□□□ 0.86
COL11A2-206ENST00000477772 SMIM5Q71RC9 77 aa20.44■□□□□ 0.86
COL11A2-206ENST00000477772 UBR3Q6ZT12 1888 aa20.43■□□□□ 0.86
COL11A2-206ENST00000477772 RTL5Q5HYW3 569 aaPredicted RBP20.43■□□□□ 0.86
COL11A2-206ENST00000477772 CCDC30Q5VVM6 783 aa20.43■□□□□ 0.86
COL11A2-206ENST00000477772 LRP10Q7Z4F1 713 aa20.43■□□□□ 0.86
COL11A2-206ENST00000477772 TUBGCP6Q96RT7 1819 aa20.42■□□□□ 0.86
COL11A2-206ENST00000477772 NBR1Q14596 966 aa20.42■□□□□ 0.86
COL11A2-206ENST00000477772 GNPATO15228 680 aa20.41■□□□□ 0.86
COL11A2-206ENST00000477772 MYL6BP14649 208 aa20.41■□□□□ 0.86
COL11A2-206ENST00000477772 RGS3P49796 1198 aa20.41■□□□□ 0.86
COL11A2-206ENST00000477772 ERBB4Q15303 1308 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms