RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 VEGFAP15692 232 aaPredicted RBP27.85■■■□□ 2.05
PDLIM1-202ENST00000477757 USPL1Q5W0Q7 1092 aa27.85■■■□□ 2.05
PDLIM1-202ENST00000477757 HSPA1AP0DMV8 641 aaKnown RBP27.83■■■□□ 2.05
PDLIM1-202ENST00000477757 HSPA1BP0DMV9 641 aaKnown RBP27.83■■■□□ 2.05
PDLIM1-202ENST00000477757 MRC1P22897 1456 aa27.83■■■□□ 2.04
PDLIM1-202ENST00000477757 DNAJC10Q8IXB1 793 aa27.82■■■□□ 2.04
PDLIM1-202ENST00000477757 NFIXQ14938 502 aa27.81■■■□□ 2.04
PDLIM1-202ENST00000477757 COL15A1P39059 1388 aa27.81■■■□□ 2.04
PDLIM1-202ENST00000477757 NARFQ9UHQ1 456 aa27.79■■■□□ 2.04
PDLIM1-202ENST00000477757 CYP19A1P11511 503 aaPredicted RBP27.78■■■□□ 2.04
PDLIM1-202ENST00000477757 SULT6B1Q6IMI4 303 aa27.78■■■□□ 2.04
PDLIM1-202ENST00000477757 TTLL6Q8N841 843 aa27.78■■■□□ 2.04
PDLIM1-202ENST00000477757 NFKBIEO00221 500 aa27.77■■■□□ 2.04
PDLIM1-202ENST00000477757 POLR3GLQ9BT43 218 aa27.77■■■□□ 2.04
PDLIM1-202ENST00000477757 CARMIL3Q8ND23 1372 aa27.76■■■□□ 2.03
PDLIM1-202ENST00000477757 SLC52A2Q9HAB3 445 aa27.76■■■□□ 2.03
PDLIM1-202ENST00000477757 SERPINB2P05120 415 aa27.75■■■□□ 2.03
PDLIM1-202ENST00000477757 BCL2L12Q9HB09 334 aa27.75■■■□□ 2.03
PDLIM1-202ENST00000477757 CCDC88AQ3V6T2 1871 aa27.74■■■□□ 2.03
PDLIM1-202ENST00000477757 AKAP4Q5JQC9 854 aa27.74■■■□□ 2.03
PDLIM1-202ENST00000477757 C2CD5Q86YS7 1000 aa27.74■■■□□ 2.03
PDLIM1-202ENST00000477757 ZBTB1Q9Y2K1 713 aa27.74■■■□□ 2.03
PDLIM1-202ENST00000477757 POTECB2RU33 542 aa27.72■■■□□ 2.03
PDLIM1-202ENST00000477757 IL13P35225 146 aa27.71■■■□□ 2.03
PDLIM1-202ENST00000477757 PANK3Q9H999 370 aa27.71■■■□□ 2.03
PDLIM1-202ENST00000477757 UBR2Q8IWV8 1755 aa27.71■■■□□ 2.03
PDLIM1-202ENST00000477757 VIRMAQ69YN4 1812 aaKnown RBP27.7■■■□□ 2.02
PDLIM1-202ENST00000477757 H0YIN7 160 aa27.7■■■□□ 2.02
PDLIM1-202ENST00000477757 ANKRD31Q8N7Z5 1873 aa27.7■■■□□ 2.02
PDLIM1-202ENST00000477757 SLC39A6Q13433 755 aa27.69■■■□□ 2.02
PDLIM1-202ENST00000477757 MORC1Q86VD1 984 aa27.69■■■□□ 2.02
PDLIM1-202ENST00000477757 LGR6Q9HBX8 967 aa27.69■■■□□ 2.02
PDLIM1-202ENST00000477757 COL11A2P13942 1736 aaPredicted RBP27.69■■■□□ 2.02
PDLIM1-202ENST00000477757 SCN7AQ01118 1682 aa27.68■■■□□ 2.02
PDLIM1-202ENST00000477757 DPY19L2Q6NUT2 758 aa27.68■■■□□ 2.02
PDLIM1-202ENST00000477757 VSIG10Q8N0Z9 540 aa27.68■■■□□ 2.02
PDLIM1-202ENST00000477757 DICER1Q9UPY3 1922 aaKnown RBP27.68■■■□□ 2.02
PDLIM1-202ENST00000477757 TIMELESSQ9UNS1 1208 aa27.67■■■□□ 2.02
PDLIM1-202ENST00000477757 FER1L6Q2WGJ9 1857 aa27.67■■■□□ 2.02
PDLIM1-202ENST00000477757 RNMTO43148 476 aaKnown RBP27.66■■■□□ 2.02
PDLIM1-202ENST00000477757 CREBZFQ9NS37 354 aa27.66■■■□□ 2.02
PDLIM1-202ENST00000477757 PDZRN3Q9UPQ7 1066 aa27.64■■■□□ 2.02
PDLIM1-202ENST00000477757 ERFEQ4G0M1 354 aa27.63■■■□□ 2.01
PDLIM1-202ENST00000477757 LTBP3Q9NS15 1303 aa27.63■■■□□ 2.01
PDLIM1-202ENST00000477757 CANXP27824 592 aaKnown RBP27.62■■■□□ 2.01
PDLIM1-202ENST00000477757 CHADLQ6NUI6 762 aa27.62■■■□□ 2.01
PDLIM1-202ENST00000477757 EIF5P55010 431 aaKnown RBP27.61■■■□□ 2.01
PDLIM1-202ENST00000477757 BICDL1Q6ZP65 573 aa27.61■■■□□ 2.01
PDLIM1-202ENST00000477757 BRIP1Q9BX63 1249 aa27.61■■■□□ 2.01
PDLIM1-202ENST00000477757 C21orf2O43822 256 aa27.6■■■□□ 2.01
PDLIM1-202ENST00000477757 ZNF622Q969S3 477 aaKnown RBP eCLIP27.6■■■□□ 2.01
PDLIM1-202ENST00000477757 MKRN1Q9UHC7 482 aaKnown RBP27.6■■■□□ 2.01
PDLIM1-202ENST00000477757 A0A087WZG4 1122 aa27.59■■■□□ 2.01
PDLIM1-202ENST00000477757 PDE6BP35913 854 aa27.59■■■□□ 2.01
PDLIM1-202ENST00000477757 TBC1D9BQ66K14 1250 aa27.58■■■□□ 2.01
PDLIM1-202ENST00000477757 TAOK3Q9H2K8 898 aa27.58■■■□□ 2.01
PDLIM1-202ENST00000477757 CNTNAP1P78357 1384 aa27.58■■■□□ 2.01
PDLIM1-202ENST00000477757 STARD3NLO95772 234 aa27.57■■■□□ 2
PDLIM1-202ENST00000477757 PRR5LQ6MZQ0 368 aa27.57■■■□□ 2
PDLIM1-202ENST00000477757 ZNF219Q9P2Y4 722 aaPredicted RBP27.57■■■□□ 2
PDLIM1-202ENST00000477757 ARFGEF2Q9Y6D5 1785 aa27.57■■■□□ 2
PDLIM1-202ENST00000477757 POTEIP0CG38 1075 aa27.56■■■□□ 2
PDLIM1-202ENST00000477757 POTEJP0CG39 1038 aa27.56■■■□□ 2
PDLIM1-202ENST00000477757 MTHFSDQ2M296 383 aaKnown RBP27.56■■■□□ 2
PDLIM1-202ENST00000477757 HMOX1P09601 288 aa27.55■■■□□ 2
PDLIM1-202ENST00000477757 FOXN1O15353 648 aa27.54■■■□□ 2
PDLIM1-202ENST00000477757 EIF4G2P78344 907 aaKnown RBP eCLIP27.54■■■□□ 2
PDLIM1-202ENST00000477757 TTC5Q8N0Z6 440 aa27.54■■■□□ 2
PDLIM1-202ENST00000477757 PASKQ96RG2 1323 aa27.53■■■□□ 2
PDLIM1-202ENST00000477757 DDNO94850 711 aaPredicted RBP27.53■■■□□ 2
PDLIM1-202ENST00000477757 HSPA5P11021 654 aaKnown RBP27.53■■■□□ 2
PDLIM1-202ENST00000477757 KNSTRNQ9Y448 316 aa27.53■■■□□ 2
PDLIM1-202ENST00000477757 PRDM10Q9NQV6 1147 aa27.52■■■□□ 2
PDLIM1-202ENST00000477757 SLX4Q8IY92 1834 aa27.52■■■□□ 2
PDLIM1-202ENST00000477757 CACNA1SQ13698 1873 aa27.51■■□□□ 1.99
PDLIM1-202ENST00000477757 HEG1Q9ULI3 1381 aa27.51■■□□□ 1.99
PDLIM1-202ENST00000477757 SOGA3Q5TF21 947 aa27.51■■□□□ 1.99
PDLIM1-202ENST00000477757 STYK1Q6J9G0 422 aa27.51■■□□□ 1.99
PDLIM1-202ENST00000477757 CCDC24Q8N4L8 307 aa27.51■■□□□ 1.99
PDLIM1-202ENST00000477757 SCN4AP35499 1836 aa27.51■■□□□ 1.99
PDLIM1-202ENST00000477757 BCORQ6W2J9 1755 aa27.5■■□□□ 1.99
PDLIM1-202ENST00000477757 IQCA1LA6NCM1 817 aa27.5■■□□□ 1.99
PDLIM1-202ENST00000477757 PRPF40BQ6NWY9 871 aaKnown RBP27.5■■□□□ 1.99
PDLIM1-202ENST00000477757 LDHDQ86WU2 507 aa27.5■■□□□ 1.99
PDLIM1-202ENST00000477757 CNBD1Q8NA66 436 aa27.5■■□□□ 1.99
PDLIM1-202ENST00000477757 CNKSR1Q969H4 720 aa27.5■■□□□ 1.99
PDLIM1-202ENST00000477757 L3MBTL3Q96JM7 780 aaPredicted RBP27.5■■□□□ 1.99
PDLIM1-202ENST00000477757 SIPA1L3O60292 1781 aaPredicted RBP27.5■■□□□ 1.99
PDLIM1-202ENST00000477757 IL6STP40189 918 aaPredicted RBP27.49■■□□□ 1.99
PDLIM1-202ENST00000477757 AMER1Q5JTC6 1135 aaPredicted RBP27.49■■□□□ 1.99
PDLIM1-202ENST00000477757 ZNF496Q96IT1 587 aaPredicted RBP27.49■■□□□ 1.99
PDLIM1-202ENST00000477757 TBC1D2BQ9UPU7 963 aa27.49■■□□□ 1.99
PDLIM1-202ENST00000477757 SRGNP10124 158 aa27.48■■□□□ 1.99
PDLIM1-202ENST00000477757 TEX13AQ9BXU3 409 aaPredicted RBP27.48■■□□□ 1.99
PDLIM1-202ENST00000477757 ZNF330Q9Y3S2 320 aaPredicted RBP27.47■■□□□ 1.99
PDLIM1-202ENST00000477757 CTCFP49711 727 aaPredicted RBP27.46■■□□□ 1.99
PDLIM1-202ENST00000477757 ZNF790Q6PG37 636 aa27.46■■□□□ 1.99
PDLIM1-202ENST00000477757 TAF1DQ9H5J8 278 aaPredicted RBP27.46■■□□□ 1.99
PDLIM1-202ENST00000477757 CLSPNQ9HAW4 1339 aa27.45■■□□□ 1.99
PDLIM1-202ENST00000477757 CAMTA2O94983 1202 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms