RNA–Protein interactions for RNA: ENST00000477590.1

SYCP1-206, Transcript of synaptonemal complex protein 1, humanhuman

TSL 2

Gene SYCP1, Length 800 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-206ENST00000477590 RRAGCQ9HB90 399 aa9.91□□□□□ -0.82
SYCP1-206ENST00000477590 NDFIP2Q9NV92 336 aa9.91□□□□□ -0.82
SYCP1-206ENST00000477590 INHAP05111 366 aa9.9□□□□□ -0.82
SYCP1-206ENST00000477590 BMP4P12644 408 aa9.9□□□□□ -0.82
SYCP1-206ENST00000477590 ADAMTS19Q8TE59 1207 aa9.9□□□□□ -0.82
SYCP1-206ENST00000477590 CRISPLD1Q9H336 500 aa9.9□□□□□ -0.82
SYCP1-206ENST00000477590 GDF2Q9UK05 429 aaPredicted RBP9.9□□□□□ -0.82
SYCP1-206ENST00000477590 PROCP04070 461 aa9.89□□□□□ -0.83
SYCP1-206ENST00000477590 TBC1D9Q6ZT07 1266 aa9.89□□□□□ -0.83
SYCP1-206ENST00000477590 GOLGA6L1Q8N7Z2 621 aa9.89□□□□□ -0.83
SYCP1-206ENST00000477590 PLPP7Q8NBV4 271 aa9.89□□□□□ -0.83
SYCP1-206ENST00000477590 AIDAQ96BJ3 306 aa9.88□□□□□ -0.83
SYCP1-206ENST00000477590 SERTAD1Q9UHV2 236 aa9.88□□□□□ -0.83
SYCP1-206ENST00000477590 GGA1Q9UJY5 639 aa9.88□□□□□ -0.83
SYCP1-206ENST00000477590 MKL2Q9ULH7 1088 aa9.88□□□□□ -0.83
SYCP1-206ENST00000477590 ATP4AP20648 1035 aa9.87□□□□□ -0.83
SYCP1-206ENST00000477590 ZCCHC2Q9C0B9 1178 aaKnown RBP9.87□□□□□ -0.83
SYCP1-206ENST00000477590 DNAAF2Q9NVR5 837 aaKnown RBP9.87□□□□□ -0.83
SYCP1-206ENST00000477590 KRBA1A5PL33 1030 aa9.86□□□□□ -0.83
SYCP1-206ENST00000477590 COL8A1P27658 744 aa9.86□□□□□ -0.83
SYCP1-206ENST00000477590 SMTNP53814 917 aa9.86□□□□□ -0.83
SYCP1-206ENST00000477590 MAP7D1Q3KQU3 841 aa9.86□□□□□ -0.83
SYCP1-206ENST00000477590 HOXB4P17483 251 aaPredicted RBP9.85□□□□□ -0.83
SYCP1-206ENST00000477590 AMPD1P23109 780 aa9.85□□□□□ -0.83
SYCP1-206ENST00000477590 NIFKQ9BYG3 293 aaKnown RBP9.85□□□□□ -0.83
SYCP1-206ENST00000477590 USP3Q9Y6I4 520 aa9.85□□□□□ -0.83
SYCP1-206ENST00000477590 TMEM229AB2RXF0 380 aa9.84□□□□□ -0.83
SYCP1-206ENST00000477590 PIK3CDO00329 1044 aa9.84□□□□□ -0.83
SYCP1-206ENST00000477590 ADAM23O75077 832 aa9.84□□□□□ -0.83
SYCP1-206ENST00000477590 SLCO4C1Q6ZQN7 724 aa9.84□□□□□ -0.83
SYCP1-206ENST00000477590 SUV39H2Q9H5I1 410 aa9.84□□□□□ -0.83
SYCP1-206ENST00000477590 HCN2Q9UL51 889 aa9.84□□□□□ -0.83
SYCP1-206ENST00000477590 PCDHGC4Q9Y5F7 938 aa9.84□□□□□ -0.83
SYCP1-206ENST00000477590 SKIP12755 728 aa9.83□□□□□ -0.84
SYCP1-206ENST00000477590 FIGNL1Q6PIW4 674 aa9.83□□□□□ -0.84
SYCP1-206ENST00000477590 LINC00114Q6XXX2 140 aa9.83□□□□□ -0.84
SYCP1-206ENST00000477590 PPP1R12CQ9BZL4 782 aa9.83□□□□□ -0.84
SYCP1-206ENST00000477590 TFIP11Q9UBB9 837 aaKnown RBP9.83□□□□□ -0.84
SYCP1-206ENST00000477590 DCDC2BA2VCK2 349 aa9.82□□□□□ -0.84
SYCP1-206ENST00000477590 NEURL1BA8MQ27 555 aa9.82□□□□□ -0.84
SYCP1-206ENST00000477590 ATXN7O15265 892 aaPredicted RBP9.82□□□□□ -0.84
SYCP1-206ENST00000477590 ZNF295-AS1Q8N0V1 137 aa9.82□□□□□ -0.84
SYCP1-206ENST00000477590 A0A1W2PNR3 127 aa9.81□□□□□ -0.84
SYCP1-206ENST00000477590 PALM3A6NDB9 673 aaPredicted RBP9.81□□□□□ -0.84
SYCP1-206ENST00000477590 EPXP11678 715 aa9.81□□□□□ -0.84
SYCP1-206ENST00000477590 RFX1P22670 979 aa9.81□□□□□ -0.84
SYCP1-206ENST00000477590 GRIN2CQ14957 1233 aa9.81□□□□□ -0.84
SYCP1-206ENST00000477590 ARSJQ5FYB0 599 aaPredicted RBP9.81□□□□□ -0.84
SYCP1-206ENST00000477590 NLRP8Q86W28 1048 aa9.81□□□□□ -0.84
SYCP1-206ENST00000477590 C1orf216Q8TAB5 229 aa9.81□□□□□ -0.84
SYCP1-206ENST00000477590 BTBD6Q96KE9 485 aa9.81□□□□□ -0.84
SYCP1-206ENST00000477590 IQSEC3Q9UPP2 1182 aaPredicted RBP9.81□□□□□ -0.84
SYCP1-206ENST00000477590 A6NJY4 79 aa9.8□□□□□ -0.84
SYCP1-206ENST00000477590 ATP9BO43861 1147 aa9.8□□□□□ -0.84
SYCP1-206ENST00000477590 ARAFP10398 606 aa9.8□□□□□ -0.84
SYCP1-206ENST00000477590 MAPTP10636 758 aaKnown RBP9.8□□□□□ -0.84
SYCP1-206ENST00000477590 CD33P20138 364 aa9.8□□□□□ -0.84
SYCP1-206ENST00000477590 LMOD1P29536 600 aaPredicted RBP9.8□□□□□ -0.84
SYCP1-206ENST00000477590 NFATC2IPQ8NCF5 419 aa9.8□□□□□ -0.84
SYCP1-206ENST00000477590 SLC4A9Q96Q91 983 aa9.8□□□□□ -0.84
SYCP1-206ENST00000477590 UCN2Q96RP3 112 aa9.8□□□□□ -0.84
SYCP1-206ENST00000477590 PCDHGA11Q9Y5H2 935 aa9.8□□□□□ -0.84
SYCP1-206ENST00000477590 KHNYNO15037 678 aaKnown RBP9.79□□□□□ -0.84
SYCP1-206ENST00000477590 TNP2Q05952 138 aa9.79□□□□□ -0.84
SYCP1-206ENST00000477590 MTFR1Q15390 333 aa9.79□□□□□ -0.84
SYCP1-206ENST00000477590 NBPF1Q3BBV0 1214 aa9.79□□□□□ -0.84
SYCP1-206ENST00000477590 CABP1Q9NZU7 370 aa9.79□□□□□ -0.84
SYCP1-206ENST00000477590 PARP3Q9Y6F1 533 aa9.79□□□□□ -0.84
SYCP1-206ENST00000477590 CDK2AP1O14519 115 aa9.78□□□□□ -0.84
SYCP1-206ENST00000477590 ZIC5Q96T25 663 aa9.78□□□□□ -0.84
SYCP1-206ENST00000477590 KLF15Q9UIH9 416 aa9.78□□□□□ -0.84
SYCP1-206ENST00000477590 TATP17735 454 aaPredicted RBP9.77□□□□□ -0.85
SYCP1-206ENST00000477590 BAG6P46379 1132 aa9.77□□□□□ -0.85
SYCP1-206ENST00000477590 USP17L5A8MUK1 530 aa9.76□□□□□ -0.85
SYCP1-206ENST00000477590 DGKGP49619 791 aa9.76□□□□□ -0.85
SYCP1-206ENST00000477590 EML3Q32P44 896 aa9.76□□□□□ -0.85
SYCP1-206ENST00000477590 ZDHHC3Q9NYG2 299 aa9.76□□□□□ -0.85
SYCP1-206ENST00000477590 MAFBQ9Y5Q3 323 aaPredicted RBP9.76□□□□□ -0.85
SYCP1-206ENST00000477590 USP17L3A6NCW0 530 aa9.75□□□□□ -0.85
SYCP1-206ENST00000477590 USP17L4A6NCW7 530 aa9.75□□□□□ -0.85
SYCP1-206ENST00000477590 GNB5O14775 395 aa9.75□□□□□ -0.85
SYCP1-206ENST00000477590 TXLNAP40222 546 aa9.75□□□□□ -0.85
SYCP1-206ENST00000477590 CFAP70Q5T0N1 1121 aa9.75□□□□□ -0.85
SYCP1-206ENST00000477590 USP17L2Q6R6M4 530 aa9.75□□□□□ -0.85
SYCP1-206ENST00000477590 CHSY3Q70JA7 882 aa9.75□□□□□ -0.85
SYCP1-206ENST00000477590 USP17L1Q7RTZ2 530 aa9.75□□□□□ -0.85
SYCP1-206ENST00000477590 ALYREFQ86V81 257 aaKnown RBP9.75□□□□□ -0.85
SYCP1-206ENST00000477590 FCHSD1Q86WN1 690 aa9.75□□□□□ -0.85
SYCP1-206ENST00000477590 DEPDC4Q8N2C3 294 aa9.75□□□□□ -0.85
SYCP1-206ENST00000477590 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.75□□□□□ -0.85
SYCP1-206ENST00000477590 LZTS3O60299 673 aaPredicted RBP9.74□□□□□ -0.85
SYCP1-206ENST00000477590 GTF2IP78347 998 aa9.74□□□□□ -0.85
SYCP1-206ENST00000477590 FAM182BQ5T319 152 aa9.74□□□□□ -0.85
SYCP1-206ENST00000477590 STRN4Q9NRL3 753 aa9.74□□□□□ -0.85
SYCP1-206ENST00000477590 ZNF358Q9NW07 568 aa9.74□□□□□ -0.85
SYCP1-206ENST00000477590 NOD1Q9Y239 953 aa9.74□□□□□ -0.85
SYCP1-206ENST00000477590 GJA3Q9Y6H8 435 aa9.74□□□□□ -0.85
SYCP1-206ENST00000477590 ACIN1Q9UKV3 1341 aaKnown RBP9.74□□□□□ -0.85
SYCP1-206ENST00000477590 K7ELQ4 463 aaPredicted RBP9.73□□□□□ -0.85
SYCP1-206ENST00000477590 FURINP09958 794 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms