RNA–Protein interactions for RNA: ENST00000477556.1

PABPC4-212, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 3

Gene PABPC4, Length 413 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-212ENST00000477556 BRCA1P38398 1863 aaKnown RBP17.67■□□□□ 0.42
PABPC4-212ENST00000477556 COL15A1P39059 1388 aa17.66■□□□□ 0.42
PABPC4-212ENST00000477556 STARD3NLO95772 234 aa17.66■□□□□ 0.42
PABPC4-212ENST00000477556 TEFQ10587 303 aa17.66■□□□□ 0.42
PABPC4-212ENST00000477556 ADAMTS7Q9UKP4 1686 aa17.66■□□□□ 0.42
PABPC4-212ENST00000477556 VIRMAQ69YN4 1812 aaKnown RBP17.65■□□□□ 0.42
PABPC4-212ENST00000477556 COL3A1P02461 1466 aaPredicted RBP17.65■□□□□ 0.42
PABPC4-212ENST00000477556 CHRNA5P30532 468 aa17.65■□□□□ 0.42
PABPC4-212ENST00000477556 IFFO2Q5TF58 517 aa17.65■□□□□ 0.42
PABPC4-212ENST00000477556 C9orf131Q5VYM1 1079 aa17.65■□□□□ 0.42
PABPC4-212ENST00000477556 ARFGEF1Q9Y6D6 1849 aa17.64■□□□□ 0.41
PABPC4-212ENST00000477556 GNAT3A8MTJ3 354 aa17.64■□□□□ 0.41
PABPC4-212ENST00000477556 NFIXQ14938 502 aa17.64■□□□□ 0.41
PABPC4-212ENST00000477556 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
PABPC4-212ENST00000477556 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
PABPC4-212ENST00000477556 A0A087WZG4 1122 aa17.62■□□□□ 0.41
PABPC4-212ENST00000477556 TOMM70O94826 608 aa17.62■□□□□ 0.41
PABPC4-212ENST00000477556 IL17REQ8NFR9 667 aa17.62■□□□□ 0.41
PABPC4-212ENST00000477556 TEX13AQ9BXU3 409 aaPredicted RBP17.62■□□□□ 0.41
PABPC4-212ENST00000477556 SERPINB2P05120 415 aa17.61■□□□□ 0.41
PABPC4-212ENST00000477556 ZNF790Q6PG37 636 aa17.61■□□□□ 0.41
PABPC4-212ENST00000477556 ZNF496Q96IT1 587 aaPredicted RBP17.61■□□□□ 0.41
PABPC4-212ENST00000477556 BCL2L12Q9HB09 334 aa17.61■□□□□ 0.41
PABPC4-212ENST00000477556 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
PABPC4-212ENST00000477556 NMRK2Q9NPI5 230 aa17.6■□□□□ 0.41
PABPC4-212ENST00000477556 RNF181Q9P0P0 153 aa17.6■□□□□ 0.41
PABPC4-212ENST00000477556 HEG1Q9ULI3 1381 aa17.6■□□□□ 0.41
PABPC4-212ENST00000477556 EIF5P55010 431 aaKnown RBP17.59■□□□□ 0.41
PABPC4-212ENST00000477556 NPM2Q86SE8 214 aaKnown RBP17.59■□□□□ 0.41
PABPC4-212ENST00000477556 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
PABPC4-212ENST00000477556 FMNL2Q96PY5 1086 aa17.59■□□□□ 0.41
PABPC4-212ENST00000477556 NUDCQ9Y266 331 aa17.59■□□□□ 0.41
PABPC4-212ENST00000477556 KDM2BQ8NHM5 1336 aa17.58■□□□□ 0.4
PABPC4-212ENST00000477556 PRKAR2BP31323 418 aa17.58■□□□□ 0.4
PABPC4-212ENST00000477556 BICDL1Q6ZP65 573 aa17.58■□□□□ 0.4
PABPC4-212ENST00000477556 CEP350Q5VT06 3117 aa17.58■□□□□ 0.4
PABPC4-212ENST00000477556 AFDNP55196 1824 aaKnown RBP17.57■□□□□ 0.4
PABPC4-212ENST00000477556 APLP1P51693 650 aa17.57■□□□□ 0.4
PABPC4-212ENST00000477556 RSPH6AQ9H0K4 717 aa17.57■□□□□ 0.4
PABPC4-212ENST00000477556 ZNF330Q9Y3S2 320 aaPredicted RBP17.57■□□□□ 0.4
PABPC4-212ENST00000477556 NRXN2Q9P2S2 1712 aa17.56■□□□□ 0.4
PABPC4-212ENST00000477556 H0YIN7 160 aa17.56■□□□□ 0.4
PABPC4-212ENST00000477556 IL6STP40189 918 aaPredicted RBP17.56■□□□□ 0.4
PABPC4-212ENST00000477556 C2CD5Q86YS7 1000 aa17.56■□□□□ 0.4
PABPC4-212ENST00000477556 TTLL6Q8N841 843 aa17.56■□□□□ 0.4
PABPC4-212ENST00000477556 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
PABPC4-212ENST00000477556 CEMIPQ8WUJ3 1361 aa17.55■□□□□ 0.4
PABPC4-212ENST00000477556 BTBD11A6QL63 1104 aa17.55■□□□□ 0.4
PABPC4-212ENST00000477556 RBM46Q8TBY0 533 aaKnown RBP17.55■□□□□ 0.4
PABPC4-212ENST00000477556 U2AF1L5P0DN76 240 aaPredicted RBP17.54■□□□□ 0.4
PABPC4-212ENST00000477556 U2AF1Q01081 240 aaKnown RBP eCLIP17.54■□□□□ 0.45e-6■□□□□ 8
PABPC4-212ENST00000477556 TBC1D9BQ66K14 1250 aa17.54■□□□□ 0.4
PABPC4-212ENST00000477556 RTF1Q92541 710 aaKnown RBP17.54■□□□□ 0.4
PABPC4-212ENST00000477556 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
PABPC4-212ENST00000477556 TBC1D2BQ9UPU7 963 aa17.54■□□□□ 0.4
PABPC4-212ENST00000477556 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
PABPC4-212ENST00000477556 SIPA1L3O60292 1781 aaPredicted RBP17.53■□□□□ 0.4
PABPC4-212ENST00000477556 ZC3H4Q9UPT8 1303 aaKnown RBP17.53■□□□□ 0.4
PABPC4-212ENST00000477556 LMNB1P20700 586 aa17.53■□□□□ 0.4
PABPC4-212ENST00000477556 PPP2R1AP30153 589 aa17.53■□□□□ 0.4
PABPC4-212ENST00000477556 RASSF7Q02833 373 aa17.53■□□□□ 0.4
PABPC4-212ENST00000477556 A1BGP04217 495 aa17.52■□□□□ 0.4
PABPC4-212ENST00000477556 PDE6BP35913 854 aa17.52■□□□□ 0.4
PABPC4-212ENST00000477556 BRIP1Q9BX63 1249 aa17.52■□□□□ 0.4
PABPC4-212ENST00000477556 RRAGCQ9HB90 399 aa17.52■□□□□ 0.4
PABPC4-212ENST00000477556 DLEC1Q9Y238 1755 aa17.51■□□□□ 0.39
PABPC4-212ENST00000477556 NPHP1O15259 732 aa17.51■□□□□ 0.39
PABPC4-212ENST00000477556 KCNQ3O43525 872 aa17.51■□□□□ 0.39
PABPC4-212ENST00000477556 SBF1O95248 1867 aa17.51■□□□□ 0.39
PABPC4-212ENST00000477556 FSTL1Q12841 308 aa17.51■□□□□ 0.39
PABPC4-212ENST00000477556 ZNF622Q969S3 477 aaKnown RBP eCLIP17.51■□□□□ 0.39
PABPC4-212ENST00000477556 SETDB2Q96T68 719 aa17.51■□□□□ 0.39
PABPC4-212ENST00000477556 SCN7AQ01118 1682 aa17.51■□□□□ 0.39
PABPC4-212ENST00000477556 CAMTA2O94983 1202 aa17.5■□□□□ 0.39
PABPC4-212ENST00000477556 PRR5LQ6MZQ0 368 aa17.5■□□□□ 0.39
PABPC4-212ENST00000477556 DZIP3Q86Y13 1208 aaKnown RBP17.5■□□□□ 0.39
PABPC4-212ENST00000477556 CNBD1Q8NA66 436 aa17.49■□□□□ 0.39
PABPC4-212ENST00000477556 HTATSF1O43719 755 aaKnown RBP17.48■□□□□ 0.39
PABPC4-212ENST00000477556 SNRPA1P09661 255 aaKnown RBP17.48■□□□□ 0.39
PABPC4-212ENST00000477556 ST5P78524 1137 aa17.48■□□□□ 0.39
PABPC4-212ENST00000477556 MCM10Q7L590 875 aa17.48■□□□□ 0.39
PABPC4-212ENST00000477556 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
PABPC4-212ENST00000477556 TNRC6CQ9HCJ0 1690 aaKnown RBP17.48■□□□□ 0.39
PABPC4-212ENST00000477556 GLTPD2A6NH11 291 aa17.47■□□□□ 0.39
PABPC4-212ENST00000477556 NFKBIEO00221 500 aa17.47■□□□□ 0.39
PABPC4-212ENST00000477556 CCDC24Q8N4L8 307 aa17.47■□□□□ 0.39
PABPC4-212ENST00000477556 NEFMP07197 916 aa17.46■□□□□ 0.39
PABPC4-212ENST00000477556 PRELPP51888 382 aa17.46■□□□□ 0.39
PABPC4-212ENST00000477556 DNAJC5GQ8N7S2 189 aa17.46■□□□□ 0.39
PABPC4-212ENST00000477556 SMC1BQ8NDV3 1235 aa17.46■□□□□ 0.39
PABPC4-212ENST00000477556 ZNF652Q9Y2D9 606 aa17.46■□□□□ 0.39
PABPC4-212ENST00000477556 PRAMEF22A3QJZ6 481 aa17.45■□□□□ 0.38
PABPC4-212ENST00000477556 C21orf2O43822 256 aa17.45■□□□□ 0.38
PABPC4-212ENST00000477556 VEGFAP15692 232 aaPredicted RBP17.45■□□□□ 0.38
PABPC4-212ENST00000477556 PIP4K2AP48426 406 aaPredicted RBP17.45■□□□□ 0.38
PABPC4-212ENST00000477556 DCTN1Q14203 1278 aa17.45■□□□□ 0.38
PABPC4-212ENST00000477556 CLEC4GQ6UXB4 293 aa17.45■□□□□ 0.38
PABPC4-212ENST00000477556 CNKSR1Q969H4 720 aa17.45■□□□□ 0.38
PABPC4-212ENST00000477556 ZNF219Q9P2Y4 722 aaPredicted RBP17.45■□□□□ 0.38
PABPC4-212ENST00000477556 ANKRD31Q8N7Z5 1873 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms