RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 TATP17735 454 aaPredicted RBP13.6□□□□□ -0.23
HLA-DMB-260ENST00000477537 BEND3Q5T5X7 828 aa13.6□□□□□ -0.23
HLA-DMB-260ENST00000477537 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
HLA-DMB-260ENST00000477537 ADCY9O60503 1353 aa13.59□□□□□ -0.23
HLA-DMB-260ENST00000477537 HEG1Q9ULI3 1381 aa13.59□□□□□ -0.23
HLA-DMB-260ENST00000477537 SCN11AQ9UI33 1791 aa13.59□□□□□ -0.23
HLA-DMB-260ENST00000477537 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.23
HLA-DMB-260ENST00000477537 CHRNA2Q15822 529 aa13.58□□□□□ -0.23
HLA-DMB-260ENST00000477537 SSH3Q8TE77 659 aa13.58□□□□□ -0.23
HLA-DMB-260ENST00000477537 COL16A1Q07092 1604 aaPredicted RBP13.58□□□□□ -0.24
HLA-DMB-260ENST00000477537 MEGF6O75095 1541 aa13.58□□□□□ -0.24
HLA-DMB-260ENST00000477537 HSP90AB1P08238 724 aaKnown RBP13.58□□□□□ -0.24
HLA-DMB-260ENST00000477537 PROSER3Q2NL68 480 aa13.58□□□□□ -0.24
HLA-DMB-260ENST00000477537 TSHZ3Q63HK5 1081 aa13.58□□□□□ -0.24
HLA-DMB-260ENST00000477537 PPP1R42Q7Z4L9 355 aa13.58□□□□□ -0.24
HLA-DMB-260ENST00000477537 CHMP5Q9NZZ3 219 aa13.58□□□□□ -0.24
HLA-DMB-260ENST00000477537 SPG7Q9UQ90 795 aa13.58□□□□□ -0.24
HLA-DMB-260ENST00000477537 SALL3Q9BXA9 1300 aa13.58□□□□□ -0.24
HLA-DMB-260ENST00000477537 NBPF7P0C2Y1 421 aaPredicted RBP13.57□□□□□ -0.24
HLA-DMB-260ENST00000477537 MX1P20591 662 aa13.57□□□□□ -0.24
HLA-DMB-260ENST00000477537 POLA2Q14181 598 aa13.57□□□□□ -0.24
HLA-DMB-260ENST00000477537 GSE1Q14687 1217 aa13.57□□□□□ -0.24
HLA-DMB-260ENST00000477537 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
HLA-DMB-260ENST00000477537 USP26Q9BXU7 913 aa13.57□□□□□ -0.24
HLA-DMB-260ENST00000477537 KDM6AO15550 1401 aaPredicted RBP13.57□□□□□ -0.24
HLA-DMB-260ENST00000477537 TUBGCP6Q96RT7 1819 aa13.57□□□□□ -0.24
HLA-DMB-260ENST00000477537 PHKG2P15735 406 aa13.56□□□□□ -0.24
HLA-DMB-260ENST00000477537 MAP3K2Q9Y2U5 619 aa13.56□□□□□ -0.24
HLA-DMB-260ENST00000477537 ABCC6O95255 1503 aa13.56□□□□□ -0.24
HLA-DMB-260ENST00000477537 CD2BP2O95400 341 aaKnown RBP13.56□□□□□ -0.24
HLA-DMB-260ENST00000477537 SLC52A2Q9HAB3 445 aa13.56□□□□□ -0.24
HLA-DMB-260ENST00000477537 HYPKQ9NX55 129 aa13.56□□□□□ -0.24
HLA-DMB-260ENST00000477537 SRGAP3O43295 1099 aa13.55□□□□□ -0.24
HLA-DMB-260ENST00000477537 RAB11FIP3O75154 756 aa13.55□□□□□ -0.24
HLA-DMB-260ENST00000477537 SURF6O75683 361 aaKnown RBP13.55□□□□□ -0.24
HLA-DMB-260ENST00000477537 SLC39A6Q13433 755 aa13.55□□□□□ -0.24
HLA-DMB-260ENST00000477537 KSR2Q6VAB6 950 aa13.55□□□□□ -0.24
HLA-DMB-260ENST00000477537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.55□□□□□ -0.24
HLA-DMB-260ENST00000477537 ZNF790Q6PG37 636 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 IFNL2Q8IZJ0 200 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 IL1RAPL2Q9NP60 686 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 K7ELQ4 463 aaPredicted RBP13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 ERC2O15083 957 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 ALDH1L1O75891 902 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 REC8O95072 547 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 HSPA1LP34931 641 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 RABEP1Q15276 862 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 NFATC2IPQ8NCF5 419 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 STAP2Q9UGK3 403 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 C5P01031 1676 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 CPDO75976 1380 aa13.54□□□□□ -0.24
HLA-DMB-260ENST00000477537 DDIT3P35638 169 aa13.53□□□□□ -0.24
HLA-DMB-260ENST00000477537 DDX21Q9NR30 783 aaKnown RBP eCLIP13.53□□□□□ -0.24
HLA-DMB-260ENST00000477537 ABCA3Q99758 1704 aa13.53□□□□□ -0.24
HLA-DMB-260ENST00000477537 PKD1L3Q7Z443 1732 aa13.53□□□□□ -0.24
HLA-DMB-260ENST00000477537 NUTM1Q86Y26 1132 aa13.52□□□□□ -0.24
HLA-DMB-260ENST00000477537 RHPN1Q8TCX5 695 aa13.52□□□□□ -0.24
HLA-DMB-260ENST00000477537 C9orf78Q9NZ63 289 aaPredicted RBP13.52□□□□□ -0.24
HLA-DMB-260ENST00000477537 TRIM6-TRIM34B2RNG4 842 aa13.52□□□□□ -0.25
HLA-DMB-260ENST00000477537 CYP27B1O15528 508 aa13.52□□□□□ -0.25
HLA-DMB-260ENST00000477537 DDX58O95786 925 aaKnown RBP13.52□□□□□ -0.25
HLA-DMB-260ENST00000477537 HSP90AA1P07900 732 aaKnown RBP13.52□□□□□ -0.25
HLA-DMB-260ENST00000477537 AIMP1Q12904 312 aaKnown RBP13.52□□□□□ -0.25
HLA-DMB-260ENST00000477537 PDIA6Q15084 440 aa13.52□□□□□ -0.25
HLA-DMB-260ENST00000477537 CWF19L2Q2TBE0 894 aaKnown RBP13.52□□□□□ -0.25
HLA-DMB-260ENST00000477537 RILPL2Q969X0 211 aa13.52□□□□□ -0.25
HLA-DMB-260ENST00000477537 AOX1Q06278 1338 aa13.52□□□□□ -0.25
HLA-DMB-260ENST00000477537 KIF1BPQ96EK5 621 aa13.51□□□□□ -0.25
HLA-DMB-260ENST00000477537 DCAF5Q96JK2 942 aa13.51□□□□□ -0.25
HLA-DMB-260ENST00000477537 PLEKHG2Q9H7P9 1386 aa13.51□□□□□ -0.25
HLA-DMB-260ENST00000477537 FOXD4L1Q9NU39 408 aa13.51□□□□□ -0.25
HLA-DMB-260ENST00000477537 MCM4P33991 863 aa13.51□□□□□ -0.25
HLA-DMB-260ENST00000477537 MRC1P22897 1456 aa13.5□□□□□ -0.25
HLA-DMB-260ENST00000477537 MTX1Q13505 466 aa13.5□□□□□ -0.25
HLA-DMB-260ENST00000477537 HSP90AB4PQ58FF6 505 aa13.5□□□□□ -0.25
HLA-DMB-260ENST00000477537 TTC5Q8N0Z6 440 aa13.5□□□□□ -0.25
HLA-DMB-260ENST00000477537 LINS1Q8NG48 757 aa13.5□□□□□ -0.25
HLA-DMB-260ENST00000477537 ZNF496Q96IT1 587 aaPredicted RBP13.5□□□□□ -0.25
HLA-DMB-260ENST00000477537 ESYT1Q9BSJ8 1104 aa13.5□□□□□ -0.25
HLA-DMB-260ENST00000477537 CIZ1Q9ULV3 898 aaPredicted RBP13.5□□□□□ -0.25
HLA-DMB-260ENST00000477537 MYL6BP14649 208 aa13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 CHMLP26374 656 aa13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 OS9Q13438 667 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 RIC3Q7Z5B4 369 aa13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 HDAC5Q9UQL6 1122 aa13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 AK9Q5TCS8 1911 aa13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 NUTM2BA6NNL0 878 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 NUTM2EB1AL46 878 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 CABP4P57796 275 aa13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 UNC5CLQ8IV45 518 aa13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 NUTM2AQ8IVF1 878 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 XAGE3Q8WTP9 111 aa13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
HLA-DMB-260ENST00000477537 GRM8O00222 908 aa13.48□□□□□ -0.25
HLA-DMB-260ENST00000477537 SNRPA1P09661 255 aaKnown RBP13.48□□□□□ -0.25
HLA-DMB-260ENST00000477537 COL22A1Q8NFW1 1626 aaPredicted RBP13.48□□□□□ -0.25
HLA-DMB-260ENST00000477537 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
HLA-DMB-260ENST00000477537 LARP1Q6PKG0 1096 aaKnown RBP13.47□□□□□ -0.25
HLA-DMB-260ENST00000477537 SUCLG2Q96I99 432 aa13.47□□□□□ -0.25
HLA-DMB-260ENST00000477537 FMNL2Q96PY5 1086 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms