RNA–Protein interactions for RNA: ENST00000477469.1

STAG3-212, Transcript of stromal antigen 3, humanhuman

TSL 4

Gene STAG3, Length 719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3-212ENST00000477469 PHACTR3Q96KR7 559 aa11.85□□□□□ -0.51
STAG3-212ENST00000477469 SYT17Q9BSW7 474 aa11.85□□□□□ -0.51
STAG3-212ENST00000477469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
STAG3-212ENST00000477469 GNPATO15228 680 aa11.84□□□□□ -0.51
STAG3-212ENST00000477469 RNMTO43148 476 aaKnown RBP11.84□□□□□ -0.51
STAG3-212ENST00000477469 NEFMP07197 916 aa11.84□□□□□ -0.51
STAG3-212ENST00000477469 GOLGA2Q08379 1002 aa11.84□□□□□ -0.51
STAG3-212ENST00000477469 SMIM5Q71RC9 77 aa11.84□□□□□ -0.51
STAG3-212ENST00000477469 TRMT2AQ8IZ69 625 aaKnown RBP11.84□□□□□ -0.51
STAG3-212ENST00000477469 CDCA7LQ96GN5 454 aa11.84□□□□□ -0.51
STAG3-212ENST00000477469 TRIM35Q9UPQ4 493 aa11.84□□□□□ -0.51
STAG3-212ENST00000477469 KDM6AO15550 1401 aaPredicted RBP11.84□□□□□ -0.51
STAG3-212ENST00000477469 PAPPAQ13219 1627 aa11.83□□□□□ -0.52
STAG3-212ENST00000477469 SLFN5Q08AF3 891 aa11.83□□□□□ -0.52
STAG3-212ENST00000477469 WDR63Q8IWG1 891 aa11.83□□□□□ -0.52
STAG3-212ENST00000477469 GAS2L2Q8NHY3 880 aa11.83□□□□□ -0.52
STAG3-212ENST00000477469 SLC4A9Q96Q91 983 aa11.83□□□□□ -0.52
STAG3-212ENST00000477469 SLC52A2Q9HAB3 445 aa11.83□□□□□ -0.52
STAG3-212ENST00000477469 ADAMTS7Q9UKP4 1686 aa11.83□□□□□ -0.52
STAG3-212ENST00000477469 IL16Q14005 1332 aa11.83□□□□□ -0.52
STAG3-212ENST00000477469 E9PSI1 815 aa11.82□□□□□ -0.52
STAG3-212ENST00000477469 SSFA2P28290 1259 aa11.82□□□□□ -0.52
STAG3-212ENST00000477469 RIPK4P57078 832 aa11.82□□□□□ -0.52
STAG3-212ENST00000477469 NEUROD2Q15784 382 aa11.82□□□□□ -0.52
STAG3-212ENST00000477469 TRAPPC3LQ5T215 181 aa11.82□□□□□ -0.52
STAG3-212ENST00000477469 DUSP27Q5VZP5 1158 aa11.82□□□□□ -0.52
STAG3-212ENST00000477469 AMIGO3Q86WK7 504 aa11.82□□□□□ -0.52
STAG3-212ENST00000477469 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
STAG3-212ENST00000477469 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
STAG3-212ENST00000477469 CASZ1Q86V15 1759 aa11.82□□□□□ -0.52
STAG3-212ENST00000477469 GNAT3A8MTJ3 354 aa11.81□□□□□ -0.52
STAG3-212ENST00000477469 LMOD3Q0VAK6 560 aa11.81□□□□□ -0.52
STAG3-212ENST00000477469 VIRMAQ69YN4 1812 aaKnown RBP11.81□□□□□ -0.52
STAG3-212ENST00000477469 TEFQ10587 303 aa11.8□□□□□ -0.52
STAG3-212ENST00000477469 SLC39A6Q13433 755 aa11.8□□□□□ -0.52
STAG3-212ENST00000477469 RC3H1Q5TC82 1133 aaKnown RBP11.8□□□□□ -0.52
STAG3-212ENST00000477469 TOGARAM1Q9Y4F4 1720 aa11.8□□□□□ -0.52
STAG3-212ENST00000477469 MAP3K5Q99683 1374 aa11.79□□□□□ -0.52
STAG3-212ENST00000477469 LY75O60449 1722 aa11.78□□□□□ -0.52
STAG3-212ENST00000477469 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
STAG3-212ENST00000477469 RFC4P35249 363 aa11.78□□□□□ -0.52
STAG3-212ENST00000477469 GPR162Q16538 588 aa11.78□□□□□ -0.52
STAG3-212ENST00000477469 TTC5Q8N0Z6 440 aa11.78□□□□□ -0.52
STAG3-212ENST00000477469 IL17REQ8NFR9 667 aa11.78□□□□□ -0.52
STAG3-212ENST00000477469 RTF1Q92541 710 aaKnown RBP11.78□□□□□ -0.52
STAG3-212ENST00000477469 ARHGEF1Q92888 912 aaKnown RBP11.78□□□□□ -0.52
STAG3-212ENST00000477469 RNF123Q5XPI4 1314 aa11.78□□□□□ -0.52
STAG3-212ENST00000477469 CNTNAP4Q9C0A0 1308 aa11.78□□□□□ -0.52
STAG3-212ENST00000477469 SIPA1L3O60292 1781 aaPredicted RBP11.77□□□□□ -0.52
STAG3-212ENST00000477469 CRKLP46109 303 aaKnown RBP11.77□□□□□ -0.53
STAG3-212ENST00000477469 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.53
STAG3-212ENST00000477469 HTATSF1O43719 755 aaKnown RBP11.76□□□□□ -0.53
STAG3-212ENST00000477469 YY1P25490 414 aa11.76□□□□□ -0.53
STAG3-212ENST00000477469 CALD1Q05682 793 aaKnown RBP11.76□□□□□ -0.53
STAG3-212ENST00000477469 NLGN2Q8NFZ4 835 aa11.76□□□□□ -0.53
STAG3-212ENST00000477469 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
STAG3-212ENST00000477469 KDM3BQ7LBC6 1761 aa11.76□□□□□ -0.53
STAG3-212ENST00000477469 SCN11AQ9UI33 1791 aa11.76□□□□□ -0.53
STAG3-212ENST00000477469 BTBD11A6QL63 1104 aa11.75□□□□□ -0.53
STAG3-212ENST00000477469 ZNF853P0CG23 659 aa11.75□□□□□ -0.53
STAG3-212ENST00000477469 INTS5Q6P9B9 1019 aaKnown RBP11.75□□□□□ -0.53
STAG3-212ENST00000477469 ZNF790Q6PG37 636 aa11.75□□□□□ -0.53
STAG3-212ENST00000477469 MCM10Q7L590 875 aa11.75□□□□□ -0.53
STAG3-212ENST00000477469 NLGN1Q8N2Q7 840 aa11.75□□□□□ -0.53
STAG3-212ENST00000477469 IFT57Q9NWB7 429 aa11.75□□□□□ -0.53
STAG3-212ENST00000477469 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
STAG3-212ENST00000477469 CEMIPQ8WUJ3 1361 aa11.75□□□□□ -0.53
STAG3-212ENST00000477469 MRC1P22897 1456 aa11.75□□□□□ -0.53
STAG3-212ENST00000477469 C4BP0C0L5 1744 aa11.74□□□□□ -0.53
STAG3-212ENST00000477469 STARD3NLO95772 234 aa11.74□□□□□ -0.53
STAG3-212ENST00000477469 MMP10P09238 476 aa11.74□□□□□ -0.53
STAG3-212ENST00000477469 THUMPD2Q9BTF0 503 aaKnown RBP11.74□□□□□ -0.53
STAG3-212ENST00000477469 CCDC87Q9NVE4 849 aa11.74□□□□□ -0.53
STAG3-212ENST00000477469 ITGB4P16144 1822 aa11.74□□□□□ -0.53
STAG3-212ENST00000477469 ZPR1O75312 459 aa11.73□□□□□ -0.53
STAG3-212ENST00000477469 C5P01031 1676 aa11.73□□□□□ -0.53
STAG3-212ENST00000477469 CYP19A1P11511 503 aaPredicted RBP11.73□□□□□ -0.53
STAG3-212ENST00000477469 GYS1P13807 737 aa11.73□□□□□ -0.53
STAG3-212ENST00000477469 GNAI1P63096 354 aa11.73□□□□□ -0.53
STAG3-212ENST00000477469 DCTN1Q14203 1278 aa11.73□□□□□ -0.53
STAG3-212ENST00000477469 ZNF496Q96IT1 587 aaPredicted RBP11.73□□□□□ -0.53
STAG3-212ENST00000477469 RCAN3Q9UKA8 241 aa11.73□□□□□ -0.53
STAG3-212ENST00000477469 CANXP27824 592 aaKnown RBP11.72□□□□□ -0.53
STAG3-212ENST00000477469 TSR2Q969E8 191 aaKnown RBP11.72□□□□□ -0.53
STAG3-212ENST00000477469 FMNL2Q96PY5 1086 aa11.72□□□□□ -0.53
STAG3-212ENST00000477469 TEX13AQ9BXU3 409 aaPredicted RBP11.72□□□□□ -0.53
STAG3-212ENST00000477469 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
STAG3-212ENST00000477469 UTRNP46939 3433 aa11.71□□□□□ -0.53
STAG3-212ENST00000477469 KCNQ3O43525 872 aa11.71□□□□□ -0.53
STAG3-212ENST00000477469 CT47B1P0C2W7 299 aaPredicted RBP11.71□□□□□ -0.53
STAG3-212ENST00000477469 PPP4R2Q9NY27 417 aa11.71□□□□□ -0.53
STAG3-212ENST00000477469 ZBTB1Q9Y2K1 713 aa11.71□□□□□ -0.53
STAG3-212ENST00000477469 PARP3Q9Y6F1 533 aa11.71□□□□□ -0.53
STAG3-212ENST00000477469 CHL1O00533 1208 aa11.7□□□□□ -0.54
STAG3-212ENST00000477469 RRP1P56182 461 aaKnown RBP11.7□□□□□ -0.54
STAG3-212ENST00000477469 TAF7Q15545 349 aaPredicted RBP11.7□□□□□ -0.54
STAG3-212ENST00000477469 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
STAG3-212ENST00000477469 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
STAG3-212ENST00000477469 MBIPQ9NS73 344 aa11.7□□□□□ -0.54
STAG3-212ENST00000477469 WWC3Q9ULE0 1092 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms