RNA–Protein interactions for RNA: ENST00000477216.1

SKIL-208, Transcript of SKI like proto-oncogene, human

TSL 4

Gene SKIL, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIL-208	ENST00000477216	CABP4	P57796	275 aa		33.04	■■■□□ 2.88
SKIL-208	ENST00000477216	MAPK8IP3	Q9UPT6	1336 aa		33.02	■■■□□ 2.88
SKIL-208	ENST00000477216	ARFGEF1	Q9Y6D6	1849 aa		33.01	■■■□□ 2.87
SKIL-208	ENST00000477216	DALRD3	Q5D0E6	543 aa	Known RBP	33.01	■■■□□ 2.87
SKIL-208	ENST00000477216	COL5A3	P25940	1745 aa	Predicted RBP	33.01	■■■□□ 2.87
SKIL-208	ENST00000477216	KDM6A	O15550	1401 aa	Predicted RBP	33.01	■■■□□ 2.87
SKIL-208	ENST00000477216	C9orf131	Q5VYM1	1079 aa		33	■■■□□ 2.87
SKIL-208	ENST00000477216	CCDC146	Q8IYE0	955 aa		33	■■■□□ 2.87
SKIL-208	ENST00000477216	MIER1	Q8N108	512 aa		33	■■■□□ 2.87
SKIL-208	ENST00000477216	NMRK2	Q9NPI5	230 aa		33	■■■□□ 2.87
SKIL-208	ENST00000477216	BRCA1	P38398	1863 aa	Known RBP	32.99	■■■□□ 2.87
SKIL-208	ENST00000477216	CCER2	I3L3R5	266 aa		32.99	■■■□□ 2.87
SKIL-208	ENST00000477216	RUNDC1	Q96C34	613 aa		32.97	■■■□□ 2.87
SKIL-208	ENST00000477216	SLC4A9	Q96Q91	983 aa		32.97	■■■□□ 2.87
SKIL-208	ENST00000477216	GNAT3	A8MTJ3	354 aa		32.96	■■■□□ 2.87
SKIL-208	ENST00000477216	WDR90	Q96KV7	1748 aa		32.96	■■■□□ 2.87
SKIL-208	ENST00000477216	NFE2L2	Q16236	605 aa		32.95	■■■□□ 2.87
SKIL-208	ENST00000477216	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.95	■■■□□ 2.86
SKIL-208	ENST00000477216	KLRG1	Q96E93	195 aa		32.94	■■■□□ 2.86
SKIL-208	ENST00000477216	RNMT	O43148	476 aa	Known RBP	32.93	■■■□□ 2.86
SKIL-208	ENST00000477216	KCNA3	P22001	575 aa		32.93	■■■□□ 2.86
SKIL-208	ENST00000477216	LGR6	Q9HBX8	967 aa		32.92	■■■□□ 2.86
SKIL-208	ENST00000477216	CRKL	P46109	303 aa	Known RBP	32.91	■■■□□ 2.86
SKIL-208	ENST00000477216	RNF181	Q9P0P0	153 aa		32.91	■■■□□ 2.86
SKIL-208	ENST00000477216	USP42	Q9H9J4	1324 aa	Known RBP	32.91	■■■□□ 2.86
SKIL-208	ENST00000477216	JMY	Q8N9B5	988 aa		32.9	■■■□□ 2.86
SKIL-208	ENST00000477216	ADAMTS7	Q9UKP4	1686 aa		32.9	■■■□□ 2.86
SKIL-208	ENST00000477216	SCN11A	Q9UI33	1791 aa		32.9	■■■□□ 2.86
SKIL-208	ENST00000477216	PTCD1	O75127	700 aa	Known RBP	32.89	■■■□□ 2.86
SKIL-208	ENST00000477216	FAM9B	Q8IZU0	186 aa		32.89	■■■□□ 2.86
SKIL-208	ENST00000477216	ZPR1	O75312	459 aa		32.88	■■■□□ 2.85
SKIL-208	ENST00000477216	TMPO	P42166	694 aa	Known RBP	32.88	■■■□□ 2.85
SKIL-208	ENST00000477216	SMC1B	Q8NDV3	1235 aa		32.88	■■■□□ 2.85
SKIL-208	ENST00000477216	IL17RE	Q8NFR9	667 aa		32.88	■■■□□ 2.85
SKIL-208	ENST00000477216	TNRC6C	Q9HCJ0	1690 aa	Known RBP	32.88	■■■□□ 2.85
SKIL-208	ENST00000477216	RTF1	Q92541	710 aa	Known RBP	32.87	■■■□□ 2.85
SKIL-208	ENST00000477216	MYH14	Q7Z406	1995 aa	Known RBP	32.87	■■■□□ 2.85
SKIL-208	ENST00000477216	HTATSF1	O43719	755 aa	Known RBP	32.86	■■■□□ 2.85
SKIL-208	ENST00000477216	MRC1	P22897	1456 aa		32.86	■■■□□ 2.85
SKIL-208	ENST00000477216	FKBP8	Q14318	412 aa		32.85	■■■□□ 2.85
SKIL-208	ENST00000477216	NFATC2IP	Q8NCF5	419 aa		32.85	■■■□□ 2.85
SKIL-208	ENST00000477216	RRP7A	Q9Y3A4	280 aa	Known RBP	32.85	■■■□□ 2.85
SKIL-208	ENST00000477216	KCP	Q6ZWJ8	1503 aa		32.84	■■■□□ 2.85
SKIL-208	ENST00000477216	RIPK4	P57078	832 aa		32.84	■■■□□ 2.85
SKIL-208	ENST00000477216	SLC52A2	Q9HAB3	445 aa		32.84	■■■□□ 2.85
SKIL-208	ENST00000477216	CEMIP	Q8WUJ3	1361 aa		32.83	■■■□□ 2.85
SKIL-208	ENST00000477216	APAF1	O14727	1248 aa		32.83	■■■□□ 2.85
SKIL-208	ENST00000477216	MCM10	Q7L590	875 aa		32.83	■■■□□ 2.85
SKIL-208	ENST00000477216	DLG5	Q8TDM6	1919 aa		32.83	■■■□□ 2.85
SKIL-208	ENST00000477216	DCTN1	Q14203	1278 aa		32.82	■■■□□ 2.84
SKIL-208	ENST00000477216	RRAGC	Q9HB90	399 aa		32.82	■■■□□ 2.84
SKIL-208	ENST00000477216	VIRMA	Q69YN4	1812 aa	Known RBP	32.81	■■■□□ 2.84
SKIL-208	ENST00000477216	NEUROD2	Q15784	382 aa		32.81	■■■□□ 2.84
SKIL-208	ENST00000477216	TM4SF1	P30408	202 aa		32.8	■■■□□ 2.84
SKIL-208	ENST00000477216	DDR1	Q08345	913 aa		32.8	■■■□□ 2.84
SKIL-208	ENST00000477216	TEF	Q10587	303 aa		32.8	■■■□□ 2.84
SKIL-208	ENST00000477216	SRP68	Q9UHB9	627 aa	Known RBP	32.8	■■■□□ 2.84
SKIL-208	ENST00000477216	POLRMT	O00411	1230 aa	Known RBP	32.79	■■■□□ 2.84
SKIL-208	ENST00000477216	LMOD3	Q0VAK6	560 aa		32.79	■■■□□ 2.84
SKIL-208	ENST00000477216	VEGFA	P15692	232 aa	Predicted RBP	32.76	■■■□□ 2.83
SKIL-208	ENST00000477216	LMNB1	P20700	586 aa		32.76	■■■□□ 2.83
SKIL-208	ENST00000477216	CHRNA5	P30532	468 aa		32.76	■■■□□ 2.83
SKIL-208	ENST00000477216	SBF1	O95248	1867 aa		32.76	■■■□□ 2.83
SKIL-208	ENST00000477216	INTS5	Q6P9B9	1019 aa	Known RBP	32.75	■■■□□ 2.83
SKIL-208	ENST00000477216	THUMPD2	Q9BTF0	503 aa	Known RBP	32.75	■■■□□ 2.83
SKIL-208	ENST00000477216	TJP1	Q07157	1748 aa		32.74	■■■□□ 2.83
SKIL-208	ENST00000477216	USPL1	Q5W0Q7	1092 aa		32.73	■■■□□ 2.83
SKIL-208	ENST00000477216	NARF	Q9UHQ1	456 aa		32.73	■■■□□ 2.83
SKIL-208	ENST00000477216	TRIM35	Q9UPQ4	493 aa		32.73	■■■□□ 2.83
SKIL-208	ENST00000477216	GLTPD2	A6NH11	291 aa		32.72	■■■□□ 2.83
SKIL-208	ENST00000477216	PDZRN3	Q9UPQ7	1066 aa		32.72	■■■□□ 2.83
SKIL-208	ENST00000477216	SOS1	Q07889	1333 aa	Predicted RBP	32.72	■■■□□ 2.83
SKIL-208	ENST00000477216	SIPA1L3	O60292	1781 aa	Predicted RBP	32.71	■■■□□ 2.83
SKIL-208	ENST00000477216	TTLL6	Q8N841	843 aa		32.71	■■■□□ 2.83
SKIL-208	ENST00000477216	COL13A1	Q5TAT6	717 aa	Predicted RBP	32.69	■■■□□ 2.82
SKIL-208	ENST00000477216	TNS4	Q8IZW8	715 aa		32.69	■■■□□ 2.82
SKIL-208	ENST00000477216	VSIG10	Q8N0Z9	540 aa		32.69	■■■□□ 2.82
SKIL-208	ENST00000477216	HTRA3	P83110	453 aa		32.68	■■■□□ 2.82
SKIL-208	ENST00000477216	SLC39A6	Q13433	755 aa		32.68	■■■□□ 2.82
SKIL-208	ENST00000477216	TAF7	Q15545	349 aa	Predicted RBP	32.67	■■■□□ 2.82
SKIL-208	ENST00000477216	DPY19L2	Q6NUT2	758 aa		32.67	■■■□□ 2.82
SKIL-208	ENST00000477216	DNAJC10	Q8IXB1	793 aa		32.67	■■■□□ 2.82
SKIL-208	ENST00000477216	BTBD11	A6QL63	1104 aa		32.66	■■■□□ 2.82
SKIL-208	ENST00000477216		H0YIN7	160 aa		32.66	■■■□□ 2.82
SKIL-208	ENST00000477216	COL15A1	P39059	1388 aa		32.66	■■■□□ 2.82
SKIL-208	ENST00000477216	CYP19A1	P11511	503 aa	Predicted RBP	32.65	■■■□□ 2.82
SKIL-208	ENST00000477216	NFIX	Q14938	502 aa		32.65	■■■□□ 2.82
SKIL-208	ENST00000477216		A0A087WZG4	1122 aa		32.63	■■■□□ 2.81
SKIL-208	ENST00000477216	SERPINB2	P05120	415 aa		32.63	■■■□□ 2.81
SKIL-208	ENST00000477216	NCBP3	Q53F19	620 aa	Known RBP	32.63	■■■□□ 2.81
SKIL-208	ENST00000477216	NRXN2	Q9P2S2	1712 aa		32.63	■■■□□ 2.81
SKIL-208	ENST00000477216	PRELP	P51888	382 aa		32.62	■■■□□ 2.81
SKIL-208	ENST00000477216	CCDC27	Q2M243	656 aa		32.62	■■■□□ 2.81
SKIL-208	ENST00000477216	ZNF790	Q6PG37	636 aa		32.62	■■■□□ 2.81
SKIL-208	ENST00000477216	TTC5	Q8N0Z6	440 aa		32.62	■■■□□ 2.81
SKIL-208	ENST00000477216	DLEC1	Q9Y238	1755 aa		32.62	■■■□□ 2.81
SKIL-208	ENST00000477216	RASSF7	Q02833	373 aa		32.61	■■■□□ 2.81
SKIL-208	ENST00000477216	C2CD5	Q86YS7	1000 aa		32.61	■■■□□ 2.81
SKIL-208	ENST00000477216	STARD3NL	O95772	234 aa		32.6	■■■□□ 2.81
SKIL-208	ENST00000477216	SALL2	Q9Y467	1007 aa	Predicted RBP	32.6	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms