RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 STARD3NLO95772 234 aa22.83■■□□□ 1.25
SMARCD3-210ENST00000477169 TEX13AQ9BXU3 409 aaPredicted RBP22.83■■□□□ 1.25
SMARCD3-210ENST00000477169 WWC3Q9ULE0 1092 aa22.83■■□□□ 1.25
SMARCD3-210ENST00000477169 ZBTB1Q9Y2K1 713 aa22.83■■□□□ 1.25
SMARCD3-210ENST00000477169 SIPA1L3O60292 1781 aaPredicted RBP22.82■■□□□ 1.24
SMARCD3-210ENST00000477169 PXDNLA1KZ92 1463 aa22.82■■□□□ 1.24
SMARCD3-210ENST00000477169 TM4SF1P30408 202 aa22.82■■□□□ 1.24
SMARCD3-210ENST00000477169 USPL1Q5W0Q7 1092 aa22.82■■□□□ 1.24
SMARCD3-210ENST00000477169 ZNF496Q96IT1 587 aaPredicted RBP22.82■■□□□ 1.24
SMARCD3-210ENST00000477169 NARFQ9UHQ1 456 aa22.82■■□□□ 1.24
SMARCD3-210ENST00000477169 A0A0G2JLW4 131 aa22.81■■□□□ 1.24
SMARCD3-210ENST00000477169 COL15A1P39059 1388 aa22.8■■□□□ 1.24
SMARCD3-210ENST00000477169 HEG1Q9ULI3 1381 aa22.8■■□□□ 1.24
SMARCD3-210ENST00000477169 DDR1Q08345 913 aa22.8■■□□□ 1.24
SMARCD3-210ENST00000477169 RTF1Q92541 710 aaKnown RBP22.8■■□□□ 1.24
SMARCD3-210ENST00000477169 KIAA1551Q9HCM1 1747 aa22.79■■□□□ 1.24
SMARCD3-210ENST00000477169 BTBD11A6QL63 1104 aa22.79■■□□□ 1.24
SMARCD3-210ENST00000477169 CANXP27824 592 aaKnown RBP22.79■■□□□ 1.24
SMARCD3-210ENST00000477169 FMNL2Q96PY5 1086 aa22.79■■□□□ 1.24
SMARCD3-210ENST00000477169 N4BP2Q86UW6 1770 aaPredicted RBP22.78■■□□□ 1.24
SMARCD3-210ENST00000477169 POLRMTO00411 1230 aaKnown RBP22.78■■□□□ 1.24
SMARCD3-210ENST00000477169 HTATSF1O43719 755 aaKnown RBP22.78■■□□□ 1.24
SMARCD3-210ENST00000477169 DPEP1P16444 411 aa22.78■■□□□ 1.24
SMARCD3-210ENST00000477169 MRS2Q9HD23 443 aa22.78■■□□□ 1.24
SMARCD3-210ENST00000477169 EIF5P55010 431 aaKnown RBP22.77■■□□□ 1.24
SMARCD3-210ENST00000477169 WDR43Q15061 677 aaKnown RBP eCLIP22.77■■□□□ 1.24
SMARCD3-210ENST00000477169 A0A087WZG4 1122 aa22.76■■□□□ 1.23
SMARCD3-210ENST00000477169 BCS1LQ9Y276 419 aa22.76■■□□□ 1.23
SMARCD3-210ENST00000477169 KCNA3P22001 575 aa22.75■■□□□ 1.23
SMARCD3-210ENST00000477169 MCM10Q7L590 875 aa22.75■■□□□ 1.23
SMARCD3-210ENST00000477169 PLEKHF1Q96S99 279 aa22.75■■□□□ 1.23
SMARCD3-210ENST00000477169 ADAMTS8Q9UP79 889 aa22.75■■□□□ 1.23
SMARCD3-210ENST00000477169 KCNQ3O43525 872 aa22.74■■□□□ 1.23
SMARCD3-210ENST00000477169 NEFMP07197 916 aa22.74■■□□□ 1.23
SMARCD3-210ENST00000477169 NFIXQ14938 502 aa22.74■■□□□ 1.23
SMARCD3-210ENST00000477169 BCL2L12Q9HB09 334 aa22.74■■□□□ 1.23
SMARCD3-210ENST00000477169 GIGYF1O75420 1035 aaPredicted RBP22.73■■□□□ 1.23
SMARCD3-210ENST00000477169 IL6STP40189 918 aaPredicted RBP22.73■■□□□ 1.23
SMARCD3-210ENST00000477169 C1QTNF8P60827 252 aa22.73■■□□□ 1.23
SMARCD3-210ENST00000477169 PNISRQ8TF01 805 aaKnown RBP22.73■■□□□ 1.23
SMARCD3-210ENST00000477169 PIM2Q9P1W9 311 aa22.73■■□□□ 1.23
SMARCD3-210ENST00000477169 ATP10DQ9P241 1426 aa22.73■■□□□ 1.23
SMARCD3-210ENST00000477169 PNNQ9H307 717 aaKnown RBP22.72■■□□□ 1.23
SMARCD3-210ENST00000477169 ADCY9O60503 1353 aa22.72■■□□□ 1.23
SMARCD3-210ENST00000477169 DCTN1Q14203 1278 aa22.71■■□□□ 1.23
SMARCD3-210ENST00000477169 BRCA1P38398 1863 aaKnown RBP22.71■■□□□ 1.23
SMARCD3-210ENST00000477169 A1BGP04217 495 aa22.7■■□□□ 1.22
SMARCD3-210ENST00000477169 SERPINB2P05120 415 aa22.7■■□□□ 1.22
SMARCD3-210ENST00000477169 NPM2Q86SE8 214 aaKnown RBP22.7■■□□□ 1.22
SMARCD3-210ENST00000477169 MIER1Q8N108 512 aa22.7■■□□□ 1.22
SMARCD3-210ENST00000477169 TAF7Q15545 349 aaPredicted RBP22.69■■□□□ 1.22
SMARCD3-210ENST00000477169 ARHGAP27Q6ZUM4 889 aa22.69■■□□□ 1.22
SMARCD3-210ENST00000477169 USP16Q9Y5T5 823 aa22.69■■□□□ 1.22
SMARCD3-210ENST00000477169 CCER2I3L3R5 266 aa22.68■■□□□ 1.22
SMARCD3-210ENST00000477169 SNRPA1P09661 255 aaKnown RBP22.68■■□□□ 1.22
SMARCD3-210ENST00000477169 DALRD3Q5D0E6 543 aaKnown RBP22.68■■□□□ 1.22
SMARCD3-210ENST00000477169 CCDC146Q8IYE0 955 aa22.68■■□□□ 1.22
SMARCD3-210ENST00000477169 TBC1D2BQ9UPU7 963 aa22.68■■□□□ 1.22
SMARCD3-210ENST00000477169 ZNF330Q9Y3S2 320 aaPredicted RBP22.68■■□□□ 1.22
SMARCD3-210ENST00000477169 AFDNP55196 1824 aaKnown RBP22.68■■□□□ 1.22
SMARCD3-210ENST00000477169 CHRNA5P30532 468 aa22.67■■□□□ 1.22
SMARCD3-210ENST00000477169 GPBP1L1Q9HC44 474 aaPredicted RBP22.67■■□□□ 1.22
SMARCD3-210ENST00000477169 NRXN2Q9P2S2 1712 aa22.67■■□□□ 1.22
SMARCD3-210ENST00000477169 MAPK8IP3Q9UPT6 1336 aa22.66■■□□□ 1.22
SMARCD3-210ENST00000477169 RUNDC1Q96C34 613 aa22.66■■□□□ 1.22
SMARCD3-210ENST00000477169 NFE2L2Q16236 605 aa22.65■■□□□ 1.22
SMARCD3-210ENST00000477169 BICDL1Q6ZP65 573 aa22.65■■□□□ 1.22
SMARCD3-210ENST00000477169 ARFGEF1Q9Y6D6 1849 aa22.65■■□□□ 1.22
SMARCD3-210ENST00000477169 PRAMEF22A3QJZ6 481 aa22.64■■□□□ 1.21
SMARCD3-210ENST00000477169 TBC1D9BQ66K14 1250 aa22.64■■□□□ 1.21
SMARCD3-210ENST00000477169 DLG5Q8TDM6 1919 aa22.63■■□□□ 1.21
SMARCD3-210ENST00000477169 CAMTA2O94983 1202 aa22.62■■□□□ 1.21
SMARCD3-210ENST00000477169 DZIP3Q86Y13 1208 aaKnown RBP22.62■■□□□ 1.21
SMARCD3-210ENST00000477169 ZNF526Q8TF50 670 aaPredicted RBP22.62■■□□□ 1.21
SMARCD3-210ENST00000477169 MIS18AQ9NYP9 233 aa22.62■■□□□ 1.21
SMARCD3-210ENST00000477169 SCN7AQ01118 1682 aa22.61■■□□□ 1.21
SMARCD3-210ENST00000477169 TMPOP42166 694 aaKnown RBP22.6■■□□□ 1.21
SMARCD3-210ENST00000477169 FAM9BQ8IZU0 186 aa22.6■■□□□ 1.21
SMARCD3-210ENST00000477169 SETDB2Q96T68 719 aa22.6■■□□□ 1.21
SMARCD3-210ENST00000477169 CARMIL3Q8ND23 1372 aa22.6■■□□□ 1.21
SMARCD3-210ENST00000477169 H0YIN7 160 aa22.59■■□□□ 1.21
SMARCD3-210ENST00000477169 PIP4K2AP48426 406 aaPredicted RBP22.59■■□□□ 1.21
SMARCD3-210ENST00000477169 CLEC4GQ6UXB4 293 aa22.59■■□□□ 1.21
SMARCD3-210ENST00000477169 C2CD5Q86YS7 1000 aa22.59■■□□□ 1.21
SMARCD3-210ENST00000477169 PDZRN3Q9UPQ7 1066 aa22.59■■□□□ 1.21
SMARCD3-210ENST00000477169 SENP3-EIF4A1A0A087X0R7 540 aa22.58■■□□□ 1.21
SMARCD3-210ENST00000477169 BRIP1Q9BX63 1249 aa22.58■■□□□ 1.21
SMARCD3-210ENST00000477169 NBPF26B4DH59 902 aa22.57■■□□□ 1.2
SMARCD3-210ENST00000477169 PDE6BP35913 854 aa22.57■■□□□ 1.2
SMARCD3-210ENST00000477169 C9orf131Q5VYM1 1079 aa22.57■■□□□ 1.2
SMARCD3-210ENST00000477169 PRR5LQ6MZQ0 368 aa22.57■■□□□ 1.2
SMARCD3-210ENST00000477169 NBPF10Q6P3W6 841 aaKnown RBP22.57■■□□□ 1.2
SMARCD3-210ENST00000477169 NBPF15Q8N660 670 aa22.57■■□□□ 1.2
SMARCD3-210ENST00000477169 TTLL6Q8N841 843 aa22.57■■□□□ 1.2
SMARCD3-210ENST00000477169 RRP7AQ9Y3A4 280 aaKnown RBP22.57■■□□□ 1.2
SMARCD3-210ENST00000477169 APAF1O14727 1248 aa22.56■■□□□ 1.2
SMARCD3-210ENST00000477169 RGL2O15211 777 aa22.56■■□□□ 1.2
SMARCD3-210ENST00000477169 RIPK4P57078 832 aa22.56■■□□□ 1.2
SMARCD3-210ENST00000477169 THUMPD2Q9BTF0 503 aaKnown RBP22.56■■□□□ 1.2
SMARCD3-210ENST00000477169 ZNF652Q9Y2D9 606 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms