RNA–Protein interactions for RNA: ENST00000476983.5

CLK2-205, Transcript of CDC like kinase 2, humanhuman

TSL 1 (best)

Gene CLK2, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-205ENST00000476983 SEPT12Q8IYM1 358 aa25.23■■□□□ 1.63
CLK2-205ENST00000476983 PTPRCP08575 1304 aa25.23■■□□□ 1.63
CLK2-205ENST00000476983 FLIIQ13045 1269 aa25.23■■□□□ 1.63
CLK2-205ENST00000476983 FAM182BQ5T319 152 aa25.23■■□□□ 1.63
CLK2-205ENST00000476983 PHAXQ9H814 394 aaKnown RBP25.23■■□□□ 1.63
CLK2-205ENST00000476983 USP16Q9Y5T5 823 aa25.23■■□□□ 1.63
CLK2-205ENST00000476983 ABCC4O15439 1325 aa25.22■■□□□ 1.63
CLK2-205ENST00000476983 CHMP4AQ9BY43 222 aa25.21■■□□□ 1.63
CLK2-205ENST00000476983 ONECUT3O60422 494 aaPredicted RBP25.21■■□□□ 1.63
CLK2-205ENST00000476983 PROSER3Q2NL68 480 aa25.21■■□□□ 1.63
CLK2-205ENST00000476983 ZNF772Q68DY9 489 aaPredicted RBP25.21■■□□□ 1.63
CLK2-205ENST00000476983 CCDC136Q96JN2 1154 aa25.2■■□□□ 1.62
CLK2-205ENST00000476983 RBM42Q9BTD8 480 aaKnown RBP25.2■■□□□ 1.62
CLK2-205ENST00000476983 DBF4Q9UBU7 674 aaPredicted RBP25.2■■□□□ 1.62
CLK2-205ENST00000476983 KCNQ2O43526 872 aa25.19■■□□□ 1.62
CLK2-205ENST00000476983 FKBP5Q13451 457 aaPredicted RBP25.19■■□□□ 1.62
CLK2-205ENST00000476983 F6X3S4 739 aa25.18■■□□□ 1.62
CLK2-205ENST00000476983 PIP4K2AP48426 406 aaPredicted RBP25.18■■□□□ 1.62
CLK2-205ENST00000476983 BRWD3Q6RI45 1802 aa25.16■■□□□ 1.62
CLK2-205ENST00000476983 MYL6BP14649 208 aa25.16■■□□□ 1.62
CLK2-205ENST00000476983 PDIA6Q15084 440 aa25.16■■□□□ 1.62
CLK2-205ENST00000476983 DDX21Q9NR30 783 aaKnown RBP eCLIP25.15■■□□□ 1.62
CLK2-205ENST00000476983 DDX19BQ9UMR2 479 aa25.15■■□□□ 1.62
CLK2-205ENST00000476983 SLC4A10Q6U841 1118 aa25.15■■□□□ 1.62
CLK2-205ENST00000476983 RBM6P78332 1123 aaKnown RBP25.13■■□□□ 1.61
CLK2-205ENST00000476983 DNAJC10Q8IXB1 793 aa25.13■■□□□ 1.61
CLK2-205ENST00000476983 HYPKQ9NX55 129 aa25.13■■□□□ 1.61
CLK2-205ENST00000476983 NHSQ6T4R5 1651 aa25.13■■□□□ 1.61
CLK2-205ENST00000476983 PTF1AQ7RTS3 328 aa25.13■■□□□ 1.61
CLK2-205ENST00000476983 SLC4A9Q96Q91 983 aa25.13■■□□□ 1.61
CLK2-205ENST00000476983 AIMP1Q12904 312 aaKnown RBP25.11■■□□□ 1.61
CLK2-205ENST00000476983 TJP1Q07157 1748 aa25.11■■□□□ 1.61
CLK2-205ENST00000476983 VSIG10Q8N0Z9 540 aa25.11■■□□□ 1.61
CLK2-205ENST00000476983 SBF2Q86WG5 1849 aa25.1■■□□□ 1.61
CLK2-205ENST00000476983 A1BGP04217 495 aa25.1■■□□□ 1.61
CLK2-205ENST00000476983 INTS3Q68E01 1043 aaKnown RBP25.1■■□□□ 1.61
CLK2-205ENST00000476983 BTAF1O14981 1849 aa25.1■■□□□ 1.61
CLK2-205ENST00000476983 PALLDQ8WX93 1383 aa25.1■■□□□ 1.61
CLK2-205ENST00000476983 NBPF26B4DH59 902 aa25.09■■□□□ 1.61
CLK2-205ENST00000476983 NBPF14Q5TI25 921 aa25.09■■□□□ 1.61
CLK2-205ENST00000476983 NBPF10Q6P3W6 841 aaKnown RBP25.09■■□□□ 1.61
CLK2-205ENST00000476983 NBPF15Q8N660 670 aa25.09■■□□□ 1.61
CLK2-205ENST00000476983 ADCY9O60503 1353 aa25.08■■□□□ 1.61
CLK2-205ENST00000476983 PI4KAP2A4QPH2 592 aa25.08■■□□□ 1.61
CLK2-205ENST00000476983 KRT27Q7Z3Y8 459 aa25.08■■□□□ 1.61
CLK2-205ENST00000476983 PI4KAP1Q8N8J0 262 aa25.08■■□□□ 1.61
CLK2-205ENST00000476983 XAGE3Q8WTP9 111 aa25.08■■□□□ 1.61
CLK2-205ENST00000476983 N4BP2Q86UW6 1770 aaPredicted RBP25.08■■□□□ 1.6
CLK2-205ENST00000476983 LRP10Q7Z4F1 713 aa25.07■■□□□ 1.6
CLK2-205ENST00000476983 RGS17Q9UGC6 210 aaPredicted RBP25.07■■□□□ 1.6
CLK2-205ENST00000476983 ZBTB7BO15156 539 aaPredicted RBP25.06■■□□□ 1.6
CLK2-205ENST00000476983 TEX13AQ9BXU3 409 aaPredicted RBP25.06■■□□□ 1.6
CLK2-205ENST00000476983 ERBB4Q15303 1308 aa25.06■■□□□ 1.6
CLK2-205ENST00000476983 CCT4P50991 539 aaKnown RBP25.06■■□□□ 1.6
CLK2-205ENST00000476983 COPS6Q7L5N1 327 aa25.06■■□□□ 1.6
CLK2-205ENST00000476983 PXDNLA1KZ92 1463 aa25.06■■□□□ 1.6
CLK2-205ENST00000476983 RXRBP28702 533 aa25.05■■□□□ 1.6
CLK2-205ENST00000476983 DNAAF4Q8WXU2 420 aa25.05■■□□□ 1.6
CLK2-205ENST00000476983 SMARCC1Q92922 1105 aaPredicted RBP25.05■■□□□ 1.6
CLK2-205ENST00000476983 ZBTB40Q9NUA8 1239 aa25.05■■□□□ 1.6
CLK2-205ENST00000476983 PCDHB15Q9Y5E8 787 aa25.05■■□□□ 1.6
CLK2-205ENST00000476983 LOC102724428A0A0B4J2F2 783 aa25.04■■□□□ 1.6
CLK2-205ENST00000476983 SIK1P57059 783 aa25.04■■□□□ 1.6
CLK2-205ENST00000476983 AAMPQ13685 434 aa25.04■■□□□ 1.6
CLK2-205ENST00000476983 MAP3K2Q9Y2U5 619 aa25.04■■□□□ 1.6
CLK2-205ENST00000476983 STARD3NLO95772 234 aa25.04■■□□□ 1.6
CLK2-205ENST00000476983 ATP6V1AP38606 617 aa25.04■■□□□ 1.6
CLK2-205ENST00000476983 KSR2Q6VAB6 950 aa25.04■■□□□ 1.6
CLK2-205ENST00000476983 C1orf115Q9H7X2 142 aa25.04■■□□□ 1.6
CLK2-205ENST00000476983 DDX58O95786 925 aaKnown RBP25.03■■□□□ 1.6
CLK2-205ENST00000476983 CYP19A1P11511 503 aaPredicted RBP25.02■■□□□ 1.6
CLK2-205ENST00000476983 POTEAQ6S8J7 498 aa25.02■■□□□ 1.6
CLK2-205ENST00000476983 ZNF330Q9Y3S2 320 aaPredicted RBP25.02■■□□□ 1.6
CLK2-205ENST00000476983 RIC3Q7Z5B4 369 aa25.01■■□□□ 1.59
CLK2-205ENST00000476983 MEIS3Q99687 375 aa25.01■■□□□ 1.59
CLK2-205ENST00000476983 CHMP4BQ9H444 224 aaKnown RBP25.01■■□□□ 1.59
CLK2-205ENST00000476983 ITPK1Q13572 414 aa25■■□□□ 1.59
CLK2-205ENST00000476983 ARFGEF2Q9Y6D5 1785 aa25■■□□□ 1.59
CLK2-205ENST00000476983 SRCIN1Q9C0H9 1055 aa25■■□□□ 1.59
CLK2-205ENST00000476983 CICQ96RK0 1608 aaPredicted RBP24.99■■□□□ 1.59
CLK2-205ENST00000476983 BEND3Q5T5X7 828 aa24.99■■□□□ 1.59
CLK2-205ENST00000476983 FAM196AQ6ZSG2 479 aa24.99■■□□□ 1.59
CLK2-205ENST00000476983 TTLL7Q6ZT98 887 aa24.99■■□□□ 1.59
CLK2-205ENST00000476983 ZBTB1Q9Y2K1 713 aa24.99■■□□□ 1.59
CLK2-205ENST00000476983 IGHDP01880 384 aa24.98■■□□□ 1.59
CLK2-205ENST00000476983 KCNQ4P56696 695 aa24.98■■□□□ 1.59
CLK2-205ENST00000476983 ANKRD13DQ6ZTN6 518 aa24.98■■□□□ 1.59
CLK2-205ENST00000476983 ATP10DQ9P241 1426 aa24.98■■□□□ 1.59
CLK2-205ENST00000476983 KDM2BQ8NHM5 1336 aa24.97■■□□□ 1.59
CLK2-205ENST00000476983 COL5A3P25940 1745 aaPredicted RBP24.96■■□□□ 1.59
CLK2-205ENST00000476983 NUP188Q5SRE5 1749 aa24.96■■□□□ 1.59
CLK2-205ENST00000476983 BCL11BQ9C0K0 894 aaPredicted RBP24.96■■□□□ 1.59
CLK2-205ENST00000476983 MYD88Q99836 296 aa24.95■■□□□ 1.58
CLK2-205ENST00000476983 ZNF831Q5JPB2 1677 aa24.95■■□□□ 1.58
CLK2-205ENST00000476983 CRKLP46109 303 aaKnown RBP24.94■■□□□ 1.58
CLK2-205ENST00000476983 CWF19L2Q2TBE0 894 aaKnown RBP24.94■■□□□ 1.58
CLK2-205ENST00000476983 LY75O60449 1722 aa24.94■■□□□ 1.58
CLK2-205ENST00000476983 TRIM37O94972 964 aa24.94■■□□□ 1.58
CLK2-205ENST00000476983 CENPQQ7L2Z9 268 aaPredicted RBP24.94■■□□□ 1.58
CLK2-205ENST00000476983 PLBD2Q8NHP8 589 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms