RNA–Protein interactions for RNA: ENST00000476729.5

FLOT1-209, Transcript of flotillin 1, humanhuman

TSL 2

Gene FLOT1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-209ENST00000476729 CANXP27824 592 aaKnown RBP20.61■□□□□ 0.89
FLOT1-209ENST00000476729 NFIXQ14938 502 aa20.61■□□□□ 0.89
FLOT1-209ENST00000476729 NMRK2Q9NPI5 230 aa20.61■□□□□ 0.89
FLOT1-209ENST00000476729 NARFQ9UHQ1 456 aa20.61■□□□□ 0.89
FLOT1-209ENST00000476729 TTC5Q8N0Z6 440 aa20.6■□□□□ 0.89
FLOT1-209ENST00000476729 COL3A1P02461 1466 aaPredicted RBP20.6■□□□□ 0.89
FLOT1-209ENST00000476729 BRCA1P38398 1863 aaKnown RBP20.6■□□□□ 0.89
FLOT1-209ENST00000476729 VSIG10Q8N0Z9 540 aa20.59■□□□□ 0.89
FLOT1-209ENST00000476729 BCL2L12Q9HB09 334 aa20.59■□□□□ 0.89
FLOT1-209ENST00000476729 NPC1L1Q9UHC9 1359 aa20.58■□□□□ 0.88
FLOT1-209ENST00000476729 TEFQ10587 303 aa20.57■□□□□ 0.88
FLOT1-209ENST00000476729 IL17REQ8NFR9 667 aa20.57■□□□□ 0.88
FLOT1-209ENST00000476729 GAS2L2Q8NHY3 880 aa20.57■□□□□ 0.88
FLOT1-209ENST00000476729 RNF181Q9P0P0 153 aa20.57■□□□□ 0.88
FLOT1-209ENST00000476729 GNAT3A8MTJ3 354 aa20.56■□□□□ 0.88
FLOT1-209ENST00000476729 SERPINB2P05120 415 aa20.56■□□□□ 0.88
FLOT1-209ENST00000476729 BICDL1Q6ZP65 573 aa20.56■□□□□ 0.88
FLOT1-209ENST00000476729 VIRMAQ69YN4 1812 aaKnown RBP20.55■□□□□ 0.88
FLOT1-209ENST00000476729 TOMM70O94826 608 aa20.55■□□□□ 0.88
FLOT1-209ENST00000476729 STARD3NLO95772 234 aa20.55■□□□□ 0.88
FLOT1-209ENST00000476729 ZNF496Q96IT1 587 aaPredicted RBP20.55■□□□□ 0.88
FLOT1-209ENST00000476729 ZNF330Q9Y3S2 320 aaPredicted RBP20.55■□□□□ 0.88
FLOT1-209ENST00000476729 ARFGEF1Q9Y6D6 1849 aa20.55■□□□□ 0.88
FLOT1-209ENST00000476729 EIF5P55010 431 aaKnown RBP20.53■□□□□ 0.88
FLOT1-209ENST00000476729 RASSF7Q02833 373 aa20.53■□□□□ 0.88
FLOT1-209ENST00000476729 ZNF790Q6PG37 636 aa20.53■□□□□ 0.88
FLOT1-209ENST00000476729 CARMIL3Q8ND23 1372 aa20.52■□□□□ 0.88
FLOT1-209ENST00000476729 HEG1Q9ULI3 1381 aa20.52■□□□□ 0.88
FLOT1-209ENST00000476729 PRKAR2BP31323 418 aa20.52■□□□□ 0.88
FLOT1-209ENST00000476729 UBR2Q8IWV8 1755 aa20.51■□□□□ 0.87
FLOT1-209ENST00000476729 A0A087WZG4 1122 aa20.51■□□□□ 0.87
FLOT1-209ENST00000476729 C2CD5Q86YS7 1000 aa20.51■□□□□ 0.87
FLOT1-209ENST00000476729 C16orf71Q8IYS4 520 aaPredicted RBP20.51■□□□□ 0.87
FLOT1-209ENST00000476729 PHACTR3Q96KR7 559 aa20.51■□□□□ 0.87
FLOT1-209ENST00000476729 TBC1D2BQ9UPU7 963 aa20.51■□□□□ 0.87
FLOT1-209ENST00000476729 APLP1P51693 650 aa20.5■□□□□ 0.87
FLOT1-209ENST00000476729 TBC1D9BQ66K14 1250 aa20.5■□□□□ 0.87
FLOT1-209ENST00000476729 CFAP53Q96M91 514 aa20.5■□□□□ 0.87
FLOT1-209ENST00000476729 AFDNP55196 1824 aaKnown RBP20.5■□□□□ 0.87
FLOT1-209ENST00000476729 KDM2BQ8NHM5 1336 aa20.5■□□□□ 0.87
FLOT1-209ENST00000476729 KCNQ3O43525 872 aa20.49■□□□□ 0.87
FLOT1-209ENST00000476729 A1BGP04217 495 aa20.49■□□□□ 0.87
FLOT1-209ENST00000476729 TTLL6Q8N841 843 aa20.49■□□□□ 0.87
FLOT1-209ENST00000476729 FMNL2Q96PY5 1086 aa20.49■□□□□ 0.87
FLOT1-209ENST00000476729 RSPH6AQ9H0K4 717 aa20.49■□□□□ 0.87
FLOT1-209ENST00000476729 NRXN2Q9P2S2 1712 aa20.48■□□□□ 0.87
FLOT1-209ENST00000476729 BTBD11A6QL63 1104 aa20.48■□□□□ 0.87
FLOT1-209ENST00000476729 H0YIN7 160 aa20.48■□□□□ 0.87
FLOT1-209ENST00000476729 CCDC24Q8N4L8 307 aa20.48■□□□□ 0.87
FLOT1-209ENST00000476729 TEX13AQ9BXU3 409 aaPredicted RBP20.48■□□□□ 0.87
FLOT1-209ENST00000476729 RRAGCQ9HB90 399 aa20.48■□□□□ 0.87
FLOT1-209ENST00000476729 RBM46Q8TBY0 533 aaKnown RBP20.47■□□□□ 0.87
FLOT1-209ENST00000476729 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
FLOT1-209ENST00000476729 U2AF1L5P0DN76 240 aaPredicted RBP20.46■□□□□ 0.87
FLOT1-209ENST00000476729 IL6STP40189 918 aaPredicted RBP20.46■□□□□ 0.87
FLOT1-209ENST00000476729 U2AF1Q01081 240 aaKnown RBP eCLIP20.46■□□□□ 0.87
FLOT1-209ENST00000476729 IFFO2Q5TF58 517 aa20.46■□□□□ 0.87
FLOT1-209ENST00000476729 NUDCQ9Y266 331 aa20.46■□□□□ 0.87
FLOT1-209ENST00000476729 PIP4K2AP48426 406 aaPredicted RBP20.45■□□□□ 0.86
FLOT1-209ENST00000476729 PRELPP51888 382 aa20.45■□□□□ 0.86
FLOT1-209ENST00000476729 NPM2Q86SE8 214 aaKnown RBP20.45■□□□□ 0.86
FLOT1-209ENST00000476729 ZNF622Q969S3 477 aaKnown RBP eCLIP20.45■□□□□ 0.86
FLOT1-209ENST00000476729 LMNB1P20700 586 aa20.44■□□□□ 0.86
FLOT1-209ENST00000476729 PPP2R1AP30153 589 aa20.44■□□□□ 0.86
FLOT1-209ENST00000476729 PRR5LQ6MZQ0 368 aa20.44■□□□□ 0.86
FLOT1-209ENST00000476729 ZNF219Q9P2Y4 722 aaPredicted RBP20.44■□□□□ 0.86
FLOT1-209ENST00000476729 HTRA3P83110 453 aa20.43■□□□□ 0.86
FLOT1-209ENST00000476729 MCM10Q7L590 875 aa20.43■□□□□ 0.86
FLOT1-209ENST00000476729 RTF1Q92541 710 aaKnown RBP20.43■□□□□ 0.86
FLOT1-209ENST00000476729 USP16Q9Y5T5 823 aa20.43■□□□□ 0.86
FLOT1-209ENST00000476729 SIPA1L3O60292 1781 aaPredicted RBP20.43■□□□□ 0.86
FLOT1-209ENST00000476729 PRAMEF22A3QJZ6 481 aa20.42■□□□□ 0.86
FLOT1-209ENST00000476729 NFKBIEO00221 500 aa20.42■□□□□ 0.86
FLOT1-209ENST00000476729 NPHP1O15259 732 aa20.42■□□□□ 0.86
FLOT1-209ENST00000476729 CAMTA2O94983 1202 aa20.42■□□□□ 0.86
FLOT1-209ENST00000476729 DZIP3Q86Y13 1208 aaKnown RBP20.42■□□□□ 0.86
FLOT1-209ENST00000476729 DNAJC5GQ8N7S2 189 aa20.42■□□□□ 0.86
FLOT1-209ENST00000476729 SCN7AQ01118 1682 aa20.42■□□□□ 0.86
FLOT1-209ENST00000476729 SBF1O95248 1867 aa20.41■□□□□ 0.86
FLOT1-209ENST00000476729 PDE6BP35913 854 aa20.41■□□□□ 0.86
FLOT1-209ENST00000476729 DCTN1Q14203 1278 aa20.41■□□□□ 0.86
FLOT1-209ENST00000476729 SETDB2Q96T68 719 aa20.41■□□□□ 0.86
FLOT1-209ENST00000476729 BRIP1Q9BX63 1249 aa20.41■□□□□ 0.86
FLOT1-209ENST00000476729 DLEC1Q9Y238 1755 aa20.41■□□□□ 0.86
FLOT1-209ENST00000476729 C21orf2O43822 256 aa20.4■□□□□ 0.86
FLOT1-209ENST00000476729 FSTL1Q12841 308 aa20.4■□□□□ 0.86
FLOT1-209ENST00000476729 ZC3H4Q9UPT8 1303 aaKnown RBP20.4■□□□□ 0.86
FLOT1-209ENST00000476729 CNBD1Q8NA66 436 aa20.39■□□□□ 0.85
FLOT1-209ENST00000476729 GLTPD2A6NH11 291 aa20.38■□□□□ 0.85
FLOT1-209ENST00000476729 PDZRN3Q9UPQ7 1066 aa20.38■□□□□ 0.85
FLOT1-209ENST00000476729 ANKRD31Q8N7Z5 1873 aa20.37■□□□□ 0.85
FLOT1-209ENST00000476729 ST5P78524 1137 aa20.37■□□□□ 0.85
FLOT1-209ENST00000476729 SMC1BQ8NDV3 1235 aa20.37■□□□□ 0.85
FLOT1-209ENST00000476729 TNRC6CQ9HCJ0 1690 aaKnown RBP20.36■□□□□ 0.85
FLOT1-209ENST00000476729 SNRPA1P09661 255 aaKnown RBP20.36■□□□□ 0.85
FLOT1-209ENST00000476729 COL11A2P13942 1736 aaPredicted RBP20.36■□□□□ 0.85
FLOT1-209ENST00000476729 VEGFAP15692 232 aaPredicted RBP20.35■□□□□ 0.85
FLOT1-209ENST00000476729 WDR90Q96KV7 1748 aa20.35■□□□□ 0.85
FLOT1-209ENST00000476729 MIS18AQ9NYP9 233 aa20.34■□□□□ 0.85
FLOT1-209ENST00000476729 SRGNP10124 158 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms