RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 INTS5Q6P9B9 1019 aaKnown RBP13.47□□□□□ -0.25
CCM2-208ENST00000476594 SMIM5Q71RC9 77 aa13.47□□□□□ -0.25
CCM2-208ENST00000476594 MCM10Q7L590 875 aa13.47□□□□□ -0.25
CCM2-208ENST00000476594 ZNF496Q96IT1 587 aaPredicted RBP13.47□□□□□ -0.25
CCM2-208ENST00000476594 SIPA1L3O60292 1781 aaPredicted RBP13.47□□□□□ -0.25
CCM2-208ENST00000476594 MYH14Q7Z406 1995 aaKnown RBP13.47□□□□□ -0.25
CCM2-208ENST00000476594 TAF7Q15545 349 aaPredicted RBP13.46□□□□□ -0.25
CCM2-208ENST00000476594 NLGN2Q8NFZ4 835 aa13.46□□□□□ -0.25
CCM2-208ENST00000476594 PRKRIP1Q9H875 184 aaPredicted RBP13.46□□□□□ -0.25
CCM2-208ENST00000476594 ZBTB1Q9Y2K1 713 aa13.46□□□□□ -0.25
CCM2-208ENST00000476594 C4AP0C0L4 1744 aa13.45□□□□□ -0.26
CCM2-208ENST00000476594 SNRPA1P09661 255 aaKnown RBP13.45□□□□□ -0.26
CCM2-208ENST00000476594 CANXP27824 592 aaKnown RBP13.45□□□□□ -0.26
CCM2-208ENST00000476594 PLEKHF1Q96S99 279 aa13.45□□□□□ -0.26
CCM2-208ENST00000476594 NARFQ9UHQ1 456 aa13.45□□□□□ -0.26
CCM2-208ENST00000476594 IL6STP40189 918 aaPredicted RBP13.44□□□□□ -0.26
CCM2-208ENST00000476594 TGFB2P61812 414 aa13.44□□□□□ -0.26
CCM2-208ENST00000476594 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
CCM2-208ENST00000476594 DCTN1Q14203 1278 aa13.43□□□□□ -0.26
CCM2-208ENST00000476594 USPL1Q5W0Q7 1092 aa13.43□□□□□ -0.26
CCM2-208ENST00000476594 ZNF330Q9Y3S2 320 aaPredicted RBP13.43□□□□□ -0.26
CCM2-208ENST00000476594 EIF5P55010 431 aaKnown RBP13.42□□□□□ -0.26
CCM2-208ENST00000476594 RIPK4P57078 832 aa13.42□□□□□ -0.26
CCM2-208ENST00000476594 SRP68Q9UHB9 627 aaKnown RBP13.42□□□□□ -0.26
CCM2-208ENST00000476594 C10orf71Q711Q0 1435 aa13.41□□□□□ -0.26
CCM2-208ENST00000476594 FKBP8Q14318 412 aa13.41□□□□□ -0.26
CCM2-208ENST00000476594 RUNDC1Q96C34 613 aa13.41□□□□□ -0.26
CCM2-208ENST00000476594 CHD4Q14839 1912 aa13.41□□□□□ -0.26
CCM2-208ENST00000476594 BABAM1Q9NWV8 329 aa13.4□□□□□ -0.26
CCM2-208ENST00000476594 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
CCM2-208ENST00000476594 DLG5Q8TDM6 1919 aa13.4□□□□□ -0.26
CCM2-208ENST00000476594 NPHP1O15259 732 aa13.39□□□□□ -0.27
CCM2-208ENST00000476594 ANP32CO43423 234 aa13.39□□□□□ -0.27
CCM2-208ENST00000476594 KCNQ3O43525 872 aa13.39□□□□□ -0.27
CCM2-208ENST00000476594 TMPOP42166 694 aaKnown RBP13.39□□□□□ -0.27
CCM2-208ENST00000476594 TSPYL4Q9UJ04 414 aa13.39□□□□□ -0.27
CCM2-208ENST00000476594 POLRMTO00411 1230 aaKnown RBP13.38□□□□□ -0.27
CCM2-208ENST00000476594 A1BGP04217 495 aa13.38□□□□□ -0.27
CCM2-208ENST00000476594 TM4SF1P30408 202 aa13.38□□□□□ -0.27
CCM2-208ENST00000476594 DZIP3Q86Y13 1208 aaKnown RBP13.38□□□□□ -0.27
CCM2-208ENST00000476594 KIF13BQ9NQT8 1826 aa13.38□□□□□ -0.27
CCM2-208ENST00000476594 UTRNP46939 3433 aa13.38□□□□□ -0.27
CCM2-208ENST00000476594 PXDNLA1KZ92 1463 aa13.37□□□□□ -0.27
CCM2-208ENST00000476594 RGL2O15211 777 aa13.37□□□□□ -0.27
CCM2-208ENST00000476594 CCDC146Q8IYE0 955 aa13.37□□□□□ -0.27
CCM2-208ENST00000476594 PDZRN3Q9UPQ7 1066 aa13.37□□□□□ -0.27
CCM2-208ENST00000476594 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
CCM2-208ENST00000476594 CARMIL3Q8ND23 1372 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 KDM3BQ7LBC6 1761 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 SERPINB2P05120 415 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 YBX3P16989 372 aaKnown RBP eCLIP13.36□□□□□ -0.272e-6■■□□□ 12.1
CCM2-208ENST00000476594 CALD1Q05682 793 aaKnown RBP13.36□□□□□ -0.27
CCM2-208ENST00000476594 DDR1Q08345 913 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 NFIXQ14938 502 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 NEUROD2Q15784 382 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 IFFO2Q5TF58 517 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 CLEC4GQ6UXB4 293 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 MIS18AQ9NYP9 233 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 PIM2Q9P1W9 311 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 ADAMTS8Q9UP79 889 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 SCN7AQ01118 1682 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 GOLGB1Q14789 3259 aaKnown RBP13.36□□□□□ -0.27
CCM2-208ENST00000476594 ERBB4Q15303 1308 aa13.36□□□□□ -0.27
CCM2-208ENST00000476594 LAMB4A4D0S4 1761 aa13.35□□□□□ -0.27
CCM2-208ENST00000476594 EIF4A1P60842 406 aaKnown RBP13.35□□□□□ -0.27
CCM2-208ENST00000476594 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
CCM2-208ENST00000476594 THUMPD2Q9BTF0 503 aaKnown RBP13.35□□□□□ -0.27
CCM2-208ENST00000476594 BCS1LQ9Y276 419 aa13.35□□□□□ -0.27
CCM2-208ENST00000476594 A0A0G2JLW4 131 aa13.34□□□□□ -0.27
CCM2-208ENST00000476594 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
CCM2-208ENST00000476594 DPEP1P16444 411 aa13.34□□□□□ -0.27
CCM2-208ENST00000476594 BICDL1Q6ZP65 573 aa13.34□□□□□ -0.27
CCM2-208ENST00000476594 CAMTA2O94983 1202 aa13.33□□□□□ -0.28
CCM2-208ENST00000476594 ST5P78524 1137 aa13.33□□□□□ -0.28
CCM2-208ENST00000476594 DALRD3Q5D0E6 543 aaKnown RBP13.33□□□□□ -0.28
CCM2-208ENST00000476594 KIF6Q6ZMV9 814 aa13.33□□□□□ -0.28
CCM2-208ENST00000476594 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
CCM2-208ENST00000476594 RRP7AQ9Y3A4 280 aaKnown RBP13.33□□□□□ -0.28
CCM2-208ENST00000476594 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
CCM2-208ENST00000476594 H0YIN7 160 aa13.32□□□□□ -0.28
CCM2-208ENST00000476594 PDE6BP35913 854 aa13.32□□□□□ -0.28
CCM2-208ENST00000476594 TBC1D9BQ66K14 1250 aa13.32□□□□□ -0.28
CCM2-208ENST00000476594 CNBD1Q8NA66 436 aa13.32□□□□□ -0.28
CCM2-208ENST00000476594 WWC3Q9ULE0 1092 aa13.32□□□□□ -0.28
CCM2-208ENST00000476594 NRXN2Q9P2S2 1712 aa13.31□□□□□ -0.28
CCM2-208ENST00000476594 BCORQ6W2J9 1755 aa13.31□□□□□ -0.28
CCM2-208ENST00000476594 N4BP2Q86UW6 1770 aaPredicted RBP13.31□□□□□ -0.28
CCM2-208ENST00000476594 ZNF784Q8NCA9 323 aaPredicted RBP13.31□□□□□ -0.28
CCM2-208ENST00000476594 CHMP4AQ9BY43 222 aa13.31□□□□□ -0.28
CCM2-208ENST00000476594 LAS1LQ9Y4W2 734 aaKnown RBP13.31□□□□□ -0.28
CCM2-208ENST00000476594 PIP4K2AP48426 406 aaPredicted RBP13.3□□□□□ -0.28
CCM2-208ENST00000476594 NBPF5PQ86XG9 351 aaPredicted RBP13.3□□□□□ -0.28
CCM2-208ENST00000476594 BRIP1Q9BX63 1249 aa13.3□□□□□ -0.28
CCM2-208ENST00000476594 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
CCM2-208ENST00000476594 AFDNP55196 1824 aaKnown RBP13.29□□□□□ -0.28
CCM2-208ENST00000476594 NBPF26B4DH59 902 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 ERVV-1B6SEH8 477 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 CHL1O00533 1208 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 APAF1O14727 1248 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms