RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 DDX41Q9UJV9 622 aaKnown RBP5.01□□□□□ -1.61
CD55-208ENST00000476590 STK24Q9Y6E0 443 aa5.01□□□□□ -1.61
CD55-208ENST00000476590 CEP164Q9UPV0 1460 aa5□□□□□ -1.61
CD55-208ENST00000476590 CCDC196A0A1B0GTZ2 297 aa5□□□□□ -1.61
CD55-208ENST00000476590 REC8O95072 547 aa5□□□□□ -1.61
CD55-208ENST00000476590 TPM3P06753 285 aa5□□□□□ -1.61
CD55-208ENST00000476590 FURINP09958 794 aa5□□□□□ -1.61
CD55-208ENST00000476590 CT47B1P0C2W7 299 aaPredicted RBP5□□□□□ -1.61
CD55-208ENST00000476590 ATP2B1P20020 1258 aa5□□□□□ -1.61
CD55-208ENST00000476590 HNRNPH2P55795 449 aaKnown RBP5□□□□□ -1.61
CD55-208ENST00000476590 SYCP1Q15431 976 aa5□□□□□ -1.61
CD55-208ENST00000476590 DNAJC14Q6Y2X3 702 aaPredicted RBP5□□□□□ -1.61
CD55-208ENST00000476590 TXNDC2Q86VQ3 553 aa5□□□□□ -1.61
CD55-208ENST00000476590 SVOPQ8N4V2 548 aa5□□□□□ -1.61
CD55-208ENST00000476590 TBC1D22AQ8WUA7 517 aa5□□□□□ -1.61
CD55-208ENST00000476590 EVI5LQ96CN4 794 aa5□□□□□ -1.61
CD55-208ENST00000476590 NUCKS1Q9H1E3 243 aaKnown RBP5□□□□□ -1.61
CD55-208ENST00000476590 RPS6KL1Q9Y6S9 549 aa5□□□□□ -1.61
CD55-208ENST00000476590 HSPA5P11021 654 aaKnown RBP4.99□□□□□ -1.61
CD55-208ENST00000476590 NEFHP12036 1026 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 POLD1P28340 1107 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 APLP1P51693 650 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 CHAF1AQ13111 956 aaPredicted RBP4.99□□□□□ -1.61
CD55-208ENST00000476590 PPP2R5AQ15172 486 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 E2F4Q16254 413 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 MUM1L1Q5H9M0 696 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 GPIHBP1Q8IV16 184 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 KRT222Q8N1A0 295 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 OXER1Q8TDS5 423 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 SREK1Q8WXA9 508 aaKnown RBP4.99□□□□□ -1.61
CD55-208ENST00000476590 TSC1Q92574 1164 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 ANAPC4Q9UJX5 808 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 DDX49Q9Y6V7 483 aaKnown RBP4.99□□□□□ -1.61
CD55-208ENST00000476590 IGF1RP08069 1367 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 A0A1B0GUL7 405 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 PPEF1O14829 653 aaPredicted RBP4.99□□□□□ -1.61
CD55-208ENST00000476590 ITGB2P05107 769 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 CYP2C19P33261 490 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 SRPK2P78362 688 aaKnown RBP4.99□□□□□ -1.61
CD55-208ENST00000476590 MAP9Q49MG5 647 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 CCDC184Q52MB2 194 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 C1QTNF12Q5T7M4 302 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 CENPQQ7L2Z9 268 aaPredicted RBP4.99□□□□□ -1.61
CD55-208ENST00000476590 MSL3Q8N5Y2 521 aaKnown RBP4.99□□□□□ -1.61
CD55-208ENST00000476590 FAM184AQ8NB25 1140 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 VTI1AQ96AJ9 217 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 SUDS3Q9H7L9 328 aaPredicted RBP4.99□□□□□ -1.61
CD55-208ENST00000476590 DIAPH3Q9NSV4 1193 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 CTNNA3Q9UI47 895 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 CNTLNQ9NXG0 1405 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 NCOA2Q15596 1464 aa4.99□□□□□ -1.61
CD55-208ENST00000476590 ANKRD33BA6NCL7 494 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 PEX14O75381 377 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 UVSSAQ2YD98 709 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 JARID2Q92833 1246 aaPredicted RBP4.98□□□□□ -1.61
CD55-208ENST00000476590 ERCC4Q92889 916 aaPredicted RBP4.98□□□□□ -1.61
CD55-208ENST00000476590 USP19O94966 1318 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 KIAA1107Q9UPP5 1409 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 PHF20L1A8MW92 1017 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 MYO1CO00159 1063 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 CTIFO43310 598 aaKnown RBP4.98□□□□□ -1.61
CD55-208ENST00000476590 SCP2P22307 547 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 RPIAP49247 311 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 MYBPC2Q14324 1141 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 ZRSR2Q15696 482 aaKnown RBP4.98□□□□□ -1.61
CD55-208ENST00000476590 NOM1Q5C9Z4 860 aaKnown RBP4.98□□□□□ -1.61
CD55-208ENST00000476590 ZNF385CQ66K41 422 aaPredicted RBP4.98□□□□□ -1.61
CD55-208ENST00000476590 SPTY2D1Q68D10 685 aaPredicted RBP4.98□□□□□ -1.61
CD55-208ENST00000476590 APBB1IPQ7Z5R6 666 aaPredicted RBP4.98□□□□□ -1.61
CD55-208ENST00000476590 SUGP1Q8IWZ8 645 aaKnown RBP4.98□□□□□ -1.61
CD55-208ENST00000476590 PIK3R5Q8WYR1 880 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 SMC3Q9UQE7 1217 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 KDM2BQ8NHM5 1336 aa4.98□□□□□ -1.61
CD55-208ENST00000476590 ERICH3Q5RHP9 1530 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 CCDC144AA2RUR9 1427 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 SCO2A0A1W2PP80 73 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 MAP4K4O95819 1239 aaPredicted RBP4.97□□□□□ -1.61
CD55-208ENST00000476590 SMPD1P17405 629 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 PAX7P23759 505 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 MAP2K2P36507 400 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 MLLT3P42568 568 aaPredicted RBP4.97□□□□□ -1.61
CD55-208ENST00000476590 GYS2P54840 703 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 CCT2P78371 535 aaKnown RBP4.97□□□□□ -1.61
CD55-208ENST00000476590 NOLC1Q14978 699 aaKnown RBP eCLIP4.97□□□□□ -1.61
CD55-208ENST00000476590 ZSCAN26Q16670 478 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 TTC31Q49AM3 519 aaPredicted RBP4.97□□□□□ -1.61
CD55-208ENST00000476590 JAKMIP3Q5VZ66 844 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 PARP9Q8IXQ6 854 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 C10orf67Q8IYJ2 551 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 ANKRD20A12PQ8NF67 263 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 GBP4Q96PP9 640 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 PRKRIP1Q9H875 184 aaPredicted RBP4.97□□□□□ -1.61
CD55-208ENST00000476590 POLKQ9UBT6 870 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 MYOM3Q5VTT5 1437 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 SOCS7O14512 581 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 TCF3P15923 654 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 RBM5P52756 815 aaKnown RBP eCLIP4.97□□□□□ -1.61
CD55-208ENST00000476590 IRX1P78414 480 aaPredicted RBP4.97□□□□□ -1.61
CD55-208ENST00000476590 TSGA10IPQ3SY00 556 aa4.97□□□□□ -1.61
CD55-208ENST00000476590 SAMD7Q7Z3H4 446 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms