RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 RAPGEF4Q8WZA2 1011 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 JAKMIP1Q96N16 626 aaKnown RBP6.01□□□□□ -1.45
CCDC39-204ENST00000476379 PHAXQ9H814 394 aaKnown RBP6.01□□□□□ -1.45
CCDC39-204ENST00000476379 ZBTB40Q9NUA8 1239 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 ISY1Q9ULR0 285 aaKnown RBP6.01□□□□□ -1.45
CCDC39-204ENST00000476379 CPS1P31327 1500 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 ERBB4Q15303 1308 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 NPHP3Q7Z494 1330 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 VAMP4O75379 141 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 HOXC9P31274 260 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 TTLL5Q6EMB2 1281 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 CCDC82Q8N4S0 544 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 FSD1Q9BTV5 496 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 NSFL1CQ9UNZ2 370 aaKnown RBP6.01□□□□□ -1.45
CCDC39-204ENST00000476379 TULP4Q9NRJ4 1543 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 ERC2O15083 957 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 NUCB1Q02818 461 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 MTHFSDQ2M296 383 aaKnown RBP6.01□□□□□ -1.45
CCDC39-204ENST00000476379 CHST3Q7LGC8 479 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 FILIP1Q7Z7B0 1213 aa6.01□□□□□ -1.45
CCDC39-204ENST00000476379 ZFP91Q96JP5 570 aaPredicted RBP6.01□□□□□ -1.45
CCDC39-204ENST00000476379 SPATA31D1Q6ZQQ2 1576 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 PHF14O94880 888 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 LMOD3Q0VAK6 560 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 CHAF1AQ13111 956 aaPredicted RBP6□□□□□ -1.45
CCDC39-204ENST00000476379 ZSCAN23Q3MJ62 389 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 PIBF1Q8WXW3 757 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 LRRCC1Q9C099 1032 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 CNPY2Q9Y2B0 182 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 GADD45BO75293 160 aaPredicted RBP6□□□□□ -1.45
CCDC39-204ENST00000476379 GNAI2P04899 355 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 APPP05067 770 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 GSPT1P15170 499 aaKnown RBP6□□□□□ -1.45
CCDC39-204ENST00000476379 ILDR1Q86SU0 546 aaPredicted RBP6□□□□□ -1.45
CCDC39-204ENST00000476379 RBSNQ9H1K0 784 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 SBNO2Q9Y2G9 1366 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 CEP350Q5VT06 3117 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 IQGAP1P46940 1657 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 CENPFP49454 3210 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 ATP5J2-PTCD1G3V325 749 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 NUCB2P80303 420 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 BICDL1Q6ZP65 573 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 AACSQ86V21 672 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 FAM184AQ8NB25 1140 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 EDC3Q96F86 508 aaKnown RBP6□□□□□ -1.45
CCDC39-204ENST00000476379 PALD1Q9ULE6 856 aa6□□□□□ -1.45
CCDC39-204ENST00000476379 FCHSD2O94868 740 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 RABEP1Q15276 862 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 SF3A1Q15459 793 aaKnown RBP5.99□□□□□ -1.45
CCDC39-204ENST00000476379 SLC4A8Q2Y0W8 1093 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 RIC3Q7Z5B4 369 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 GCC1Q96CN9 775 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 TMX3Q96JJ7 454 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 TRIM5Q9C035 493 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 DEPDC5O75140 1603 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 PNMA6EA0A0J9YXQ4 647 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 MX1P20591 662 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 PLEKHM2Q8IWE5 1019 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 NFATC2IPQ8NCF5 419 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 USP21Q9UK80 565 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 MYO3AQ8NEV4 1616 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 ANKRD36BQ8N2N9 1353 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 PES1O00541 588 aaKnown RBP5.99□□□□□ -1.45
CCDC39-204ENST00000476379 CWF19L2Q2TBE0 894 aaKnown RBP5.99□□□□□ -1.45
CCDC39-204ENST00000476379 SKOR2Q2VWA4 1001 aaPredicted RBP5.99□□□□□ -1.45
CCDC39-204ENST00000476379 TAF7LQ5H9L4 462 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 DHX37Q8IY37 1157 aaKnown RBP5.99□□□□□ -1.45
CCDC39-204ENST00000476379 SNRKQ9NRH2 765 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 TRMT1Q9NXH9 659 aaKnown RBP5.99□□□□□ -1.45
CCDC39-204ENST00000476379 ADGRB1O14514 1584 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 PI4KAP2A4QPH2 592 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 ZBTB7BO15156 539 aaPredicted RBP5.99□□□□□ -1.45
CCDC39-204ENST00000476379 CCT2P78371 535 aaKnown RBP5.99□□□□□ -1.45
CCDC39-204ENST00000476379 MRPL50Q8N5N7 158 aaKnown RBP5.99□□□□□ -1.45
CCDC39-204ENST00000476379 PI4KAP1Q8N8J0 262 aa5.99□□□□□ -1.45
CCDC39-204ENST00000476379 ZNF692Q9BU19 519 aaPredicted RBP5.99□□□□□ -1.45
CCDC39-204ENST00000476379 BECN2A8MW95 431 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 BIN1O00499 593 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 PTPN21Q16825 1174 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 UNC5CLQ8IV45 518 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 SYAP1Q96A49 352 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-204ENST00000476379 C16orf45Q96MC5 204 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-204ENST00000476379 TSPY26PQ9H489 355 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 LMTK2Q8IWU2 1503 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 FLIIQ13045 1269 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 C1orf141Q5JVX7 400 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 PPP1R42Q7Z4L9 355 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 SIRT2Q8IXJ6 389 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 TRPM1Q7Z4N2 1603 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 HAND2P61296 217 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 G3BP1Q13283 466 aaKnown RBP eCLIP5.98□□□□□ -1.45
CCDC39-204ENST00000476379 WASHC4Q2M389 1173 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 BMP2KLQ5H9B9 411 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 TTC22Q5TAA0 569 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 C1orf167Q5SNV9 1468 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 ZNF521Q96K83 1311 aa5.98□□□□□ -1.45
CCDC39-204ENST00000476379 ERICH4A6NGS2 130 aa5.97□□□□□ -1.45
CCDC39-204ENST00000476379 CCDC144CPQ8IYA2 1237 aa5.97□□□□□ -1.45
CCDC39-204ENST00000476379 EIF2AK4Q9P2K8 1649 aaKnown RBP5.97□□□□□ -1.45
CCDC39-204ENST00000476379 LARP1BQ659C4 914 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms