RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 SCN7AQ01118 1682 aa17.77■□□□□ 0.43
MRPL55-228ENST00000476267 FCHSD2O94868 740 aa17.76■□□□□ 0.43
MRPL55-228ENST00000476267 HSPA6P17066 643 aa17.76■□□□□ 0.43
MRPL55-228ENST00000476267 USPL1Q5W0Q7 1092 aa17.76■□□□□ 0.43
MRPL55-228ENST00000476267 BCL2L12Q9HB09 334 aa17.76■□□□□ 0.43
MRPL55-228ENST00000476267 SBF1O95248 1867 aa17.75■□□□□ 0.43
MRPL55-228ENST00000476267 PIM2Q9P1W9 311 aa17.75■□□□□ 0.43
MRPL55-228ENST00000476267 NARFQ9UHQ1 456 aa17.75■□□□□ 0.43
MRPL55-228ENST00000476267 ARHGAP27Q6ZUM4 889 aa17.74■□□□□ 0.43
MRPL55-228ENST00000476267 CHRNA5P30532 468 aa17.73■□□□□ 0.43
MRPL55-228ENST00000476267 CEMIPQ8WUJ3 1361 aa17.73■□□□□ 0.43
MRPL55-228ENST00000476267 ZPR1O75312 459 aa17.72■□□□□ 0.43
MRPL55-228ENST00000476267 NFIXQ14938 502 aa17.72■□□□□ 0.43
MRPL55-228ENST00000476267 IL17REQ8NFR9 667 aa17.72■□□□□ 0.43
MRPL55-228ENST00000476267 ANKRD31Q8N7Z5 1873 aa17.71■□□□□ 0.43
MRPL55-228ENST00000476267 DALRD3Q5D0E6 543 aaKnown RBP17.71■□□□□ 0.43
MRPL55-228ENST00000476267 BCORQ6W2J9 1755 aa17.71■□□□□ 0.43
MRPL55-228ENST00000476267 TNRC6CQ9HCJ0 1690 aaKnown RBP17.71■□□□□ 0.42
MRPL55-228ENST00000476267 HEG1Q9ULI3 1381 aa17.7■□□□□ 0.42
MRPL55-228ENST00000476267 EIF5P55010 431 aaKnown RBP17.7■□□□□ 0.42
MRPL55-228ENST00000476267 CARMIL3Q8ND23 1372 aa17.69■□□□□ 0.42
MRPL55-228ENST00000476267 GNAT3A8MTJ3 354 aa17.69■□□□□ 0.42
MRPL55-228ENST00000476267 C9orf131Q5VYM1 1079 aa17.69■□□□□ 0.42
MRPL55-228ENST00000476267 ZNF790Q6PG37 636 aa17.69■□□□□ 0.42
MRPL55-228ENST00000476267 GAS2L2Q8NHY3 880 aa17.69■□□□□ 0.42
MRPL55-228ENST00000476267 ZNF496Q96IT1 587 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-228ENST00000476267 NMRK2Q9NPI5 230 aa17.69■□□□□ 0.42
MRPL55-228ENST00000476267 COL11A2P13942 1736 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-228ENST00000476267 U2SURPO15042 1029 aaKnown RBP17.68■□□□□ 0.42
MRPL55-228ENST00000476267 TOMM70O94826 608 aa17.68■□□□□ 0.42
MRPL55-228ENST00000476267 RSPH6AQ9H0K4 717 aa17.68■□□□□ 0.42
MRPL55-228ENST00000476267 WDR90Q96KV7 1748 aa17.67■□□□□ 0.42
MRPL55-228ENST00000476267 SERPINB2P05120 415 aa17.67■□□□□ 0.42
MRPL55-228ENST00000476267 CANXP27824 592 aaKnown RBP17.67■□□□□ 0.42
MRPL55-228ENST00000476267 TTC5Q8N0Z6 440 aa17.67■□□□□ 0.42
MRPL55-228ENST00000476267 PHACTR3Q96KR7 559 aa17.67■□□□□ 0.42
MRPL55-228ENST00000476267 TIAM2Q8IVF5 1701 aa17.67■□□□□ 0.42
MRPL55-228ENST00000476267 STARD3NLO95772 234 aa17.65■□□□□ 0.42
MRPL55-228ENST00000476267 PRELPP51888 382 aa17.65■□□□□ 0.42
MRPL55-228ENST00000476267 TEFQ10587 303 aa17.65■□□□□ 0.42
MRPL55-228ENST00000476267 RNF181Q9P0P0 153 aa17.64■□□□□ 0.41
MRPL55-228ENST00000476267 ARFGEF2Q9Y6D5 1785 aa17.63■□□□□ 0.41
MRPL55-228ENST00000476267 A0A087WZG4 1122 aa17.63■□□□□ 0.41
MRPL55-228ENST00000476267 PRKAR2BP31323 418 aa17.63■□□□□ 0.41
MRPL55-228ENST00000476267 IL6STP40189 918 aaPredicted RBP17.63■□□□□ 0.41
MRPL55-228ENST00000476267 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
MRPL55-228ENST00000476267 TBC1D9BQ66K14 1250 aa17.63■□□□□ 0.41
MRPL55-228ENST00000476267 TEX13AQ9BXU3 409 aaPredicted RBP17.63■□□□□ 0.41
MRPL55-228ENST00000476267 KCNQ3O43525 872 aa17.62■□□□□ 0.41
MRPL55-228ENST00000476267 RASSF7Q02833 373 aa17.62■□□□□ 0.41
MRPL55-228ENST00000476267 RBM46Q8TBY0 533 aaKnown RBP17.62■□□□□ 0.41
MRPL55-228ENST00000476267 FMNL2Q96PY5 1086 aa17.62■□□□□ 0.41
MRPL55-228ENST00000476267 ZC3H4Q9UPT8 1303 aaKnown RBP17.62■□□□□ 0.41
MRPL55-228ENST00000476267 FER1L6Q2WGJ9 1857 aa17.62■□□□□ 0.41
MRPL55-228ENST00000476267 CCDC88AQ3V6T2 1871 aa17.62■□□□□ 0.41
MRPL55-228ENST00000476267 PPP2R1AP30153 589 aa17.61■□□□□ 0.41
MRPL55-228ENST00000476267 APLP1P51693 650 aa17.61■□□□□ 0.41
MRPL55-228ENST00000476267 DNAJC5GQ8N7S2 189 aa17.61■□□□□ 0.41
MRPL55-228ENST00000476267 C2CD5Q86YS7 1000 aa17.6■□□□□ 0.41
MRPL55-228ENST00000476267 TTLL6Q8N841 843 aa17.6■□□□□ 0.41
MRPL55-228ENST00000476267 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
MRPL55-228ENST00000476267 KDM2BQ8NHM5 1336 aa17.6■□□□□ 0.41
MRPL55-228ENST00000476267 DICER1Q9UPY3 1922 aaKnown RBP17.59■□□□□ 0.41
MRPL55-228ENST00000476267 LAMB4A4D0S4 1761 aa17.59■□□□□ 0.41
MRPL55-228ENST00000476267 BTBD11A6QL63 1104 aa17.59■□□□□ 0.41
MRPL55-228ENST00000476267 NFKBIEO00221 500 aa17.59■□□□□ 0.41
MRPL55-228ENST00000476267 CAMTA2O94983 1202 aa17.59■□□□□ 0.41
MRPL55-228ENST00000476267 A1BGP04217 495 aa17.59■□□□□ 0.41
MRPL55-228ENST00000476267 PRR5LQ6MZQ0 368 aa17.59■□□□□ 0.41
MRPL55-228ENST00000476267 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
MRPL55-228ENST00000476267 TBC1D2BQ9UPU7 963 aa17.59■□□□□ 0.41
MRPL55-228ENST00000476267 IFFO2Q5TF58 517 aa17.58■□□□□ 0.4
MRPL55-228ENST00000476267 BRIP1Q9BX63 1249 aa17.58■□□□□ 0.4
MRPL55-228ENST00000476267 DLG5Q8TDM6 1919 aa17.58■□□□□ 0.4
MRPL55-228ENST00000476267 CACNA1SQ13698 1873 aa17.58■□□□□ 0.4
MRPL55-228ENST00000476267 PRAMEF22A3QJZ6 481 aa17.57■□□□□ 0.4
MRPL55-228ENST00000476267 H0YIN7 160 aa17.57■□□□□ 0.4
MRPL55-228ENST00000476267 LMNB1P20700 586 aa17.57■□□□□ 0.4
MRPL55-228ENST00000476267 USP16Q9Y5T5 823 aa17.57■□□□□ 0.4
MRPL55-228ENST00000476267 KDM3BQ7LBC6 1761 aa17.57■□□□□ 0.4
MRPL55-228ENST00000476267 FSTL1Q12841 308 aa17.56■□□□□ 0.4
MRPL55-228ENST00000476267 RRAGCQ9HB90 399 aa17.56■□□□□ 0.4
MRPL55-228ENST00000476267 PDZRN3Q9UPQ7 1066 aa17.56■□□□□ 0.4
MRPL55-228ENST00000476267 NUDCQ9Y266 331 aa17.56■□□□□ 0.4
MRPL55-228ENST00000476267 PDE6BP35913 854 aa17.55■□□□□ 0.4
MRPL55-228ENST00000476267 MCM10Q7L590 875 aa17.55■□□□□ 0.4
MRPL55-228ENST00000476267 ZNF330Q9Y3S2 320 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-228ENST00000476267 SLX4Q8IY92 1834 aa17.55■□□□□ 0.4
MRPL55-228ENST00000476267 GLTPD2A6NH11 291 aa17.54■□□□□ 0.4
MRPL55-228ENST00000476267 U2AF1L5P0DN76 240 aaPredicted RBP17.54■□□□□ 0.4
MRPL55-228ENST00000476267 U2AF1Q01081 240 aaKnown RBP eCLIP17.54■□□□□ 0.4
MRPL55-228ENST00000476267 CCDC24Q8N4L8 307 aa17.54■□□□□ 0.4
MRPL55-228ENST00000476267 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
MRPL55-228ENST00000476267 PIP4K2AP48426 406 aaPredicted RBP17.53■□□□□ 0.4
MRPL55-228ENST00000476267 DZIP3Q86Y13 1208 aaKnown RBP17.53■□□□□ 0.4
MRPL55-228ENST00000476267 NBPF26B4DH59 902 aa17.52■□□□□ 0.4
MRPL55-228ENST00000476267 SNRPA1P09661 255 aaKnown RBP17.52■□□□□ 0.4
MRPL55-228ENST00000476267 DCTN1Q14203 1278 aa17.52■□□□□ 0.4
MRPL55-228ENST00000476267 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.4
MRPL55-228ENST00000476267 C16orf71Q8IYS4 520 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms