RNA–Protein interactions for RNA: ENST00000475916.1

SLF1-204, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-204ENST00000475916 COX20Q5RI15 118 aa9.51□□□□□ -0.89
SLF1-204ENST00000475916 NGLY1Q96IV0 654 aa9.51□□□□□ -0.89
SLF1-204ENST00000475916 SAP130Q9H0E3 1048 aa9.51□□□□□ -0.89
SLF1-204ENST00000475916 CABP1Q9NZU7 370 aa9.51□□□□□ -0.89
SLF1-204ENST00000475916 NR3C2P08235 984 aa9.5□□□□□ -0.89
SLF1-204ENST00000475916 XPCQ01831 940 aaPredicted RBP9.5□□□□□ -0.89
SLF1-204ENST00000475916 CLN3Q13286 438 aa9.5□□□□□ -0.89
SLF1-204ENST00000475916 NNTQ13423 1086 aa9.5□□□□□ -0.89
SLF1-204ENST00000475916 MYO19Q96H55 970 aa9.5□□□□□ -0.89
SLF1-204ENST00000475916 PRKD2Q9BZL6 878 aa9.5□□□□□ -0.89
SLF1-204ENST00000475916 SHROOM4Q9ULL8 1493 aa9.49□□□□□ -0.89
SLF1-204ENST00000475916 MEN1O00255 615 aa9.49□□□□□ -0.89
SLF1-204ENST00000475916 IL2RAP01589 272 aa9.49□□□□□ -0.89
SLF1-204ENST00000475916 TEAD4Q15561 434 aa9.49□□□□□ -0.89
SLF1-204ENST00000475916 TMEM214Q6NUQ4 689 aaKnown RBP9.49□□□□□ -0.89
SLF1-204ENST00000475916 MRS2Q9HD23 443 aa9.49□□□□□ -0.89
SLF1-204ENST00000475916 IGSF5Q9NSI5 407 aa9.49□□□□□ -0.89
SLF1-204ENST00000475916 NOS2P35228 1153 aa9.48□□□□□ -0.89
SLF1-204ENST00000475916 MAPK8P45983 427 aa9.48□□□□□ -0.89
SLF1-204ENST00000475916 CENPCQ03188 943 aa9.48□□□□□ -0.89
SLF1-204ENST00000475916 C11orf91Q3C1V1 193 aa9.48□□□□□ -0.89
SLF1-204ENST00000475916 NIFKQ9BYG3 293 aaKnown RBP9.48□□□□□ -0.89
SLF1-204ENST00000475916 TREHO43280 583 aa9.47□□□□□ -0.89
SLF1-204ENST00000475916 P4HBP07237 508 aaKnown RBP9.47□□□□□ -0.89
SLF1-204ENST00000475916 PTGIRP43119 386 aa9.47□□□□□ -0.89
SLF1-204ENST00000475916 RTN1Q16799 776 aa9.47□□□□□ -0.89
SLF1-204ENST00000475916 ZSCAN10Q96SZ4 725 aaPredicted RBP9.47□□□□□ -0.89
SLF1-204ENST00000475916 QTRT2Q9H974 415 aaKnown RBP9.47□□□□□ -0.89
SLF1-204ENST00000475916 FAM13BQ9NYF5 915 aa9.47□□□□□ -0.89
SLF1-204ENST00000475916 IGSF3O75054 1194 aa9.46□□□□□ -0.9
SLF1-204ENST00000475916 LDHBP07195 334 aaKnown RBP9.46□□□□□ -0.9
SLF1-204ENST00000475916 NEFLP07196 543 aa9.46□□□□□ -0.9
SLF1-204ENST00000475916 HIRAP54198 1017 aaPredicted RBP9.46□□□□□ -0.9
SLF1-204ENST00000475916 FOXC1Q12948 553 aa9.46□□□□□ -0.9
SLF1-204ENST00000475916 HIF1AQ16665 826 aa9.46□□□□□ -0.9
SLF1-204ENST00000475916 TSNAXIP1Q2TAA8 658 aa9.46□□□□□ -0.9
SLF1-204ENST00000475916 GNASQ5JWF2 1037 aa9.46□□□□□ -0.9
SLF1-204ENST00000475916 ALDH16A1Q8IZ83 802 aa9.46□□□□□ -0.9
SLF1-204ENST00000475916 SNIP1Q8TAD8 396 aaKnown RBP9.46□□□□□ -0.9
SLF1-204ENST00000475916 L3MBTL2Q969R5 705 aa9.46□□□□□ -0.9
SLF1-204ENST00000475916 HCN4Q9Y3Q4 1203 aa9.46□□□□□ -0.9
SLF1-204ENST00000475916 TTC24A2A3L6 582 aaPredicted RBP9.45□□□□□ -0.9
SLF1-204ENST00000475916 TNFRSF10BO14763 440 aa9.45□□□□□ -0.9
SLF1-204ENST00000475916 ZNF697Q5TEC3 545 aa9.45□□□□□ -0.9
SLF1-204ENST00000475916 SPRYD7Q5W111 196 aa9.45□□□□□ -0.9
SLF1-204ENST00000475916 SPNS2Q8IVW8 549 aa9.45□□□□□ -0.9
SLF1-204ENST00000475916 CCDC87Q9NVE4 849 aa9.45□□□□□ -0.9
SLF1-204ENST00000475916 IQSEC3Q9UPP2 1182 aaPredicted RBP9.45□□□□□ -0.9
SLF1-204ENST00000475916 EML1O00423 815 aa9.44□□□□□ -0.9
SLF1-204ENST00000475916 FZD6O60353 706 aa9.44□□□□□ -0.9
SLF1-204ENST00000475916 PRPF40AO75400 957 aaKnown RBP9.44□□□□□ -0.9
SLF1-204ENST00000475916 ZIC2O95409 532 aaPredicted RBP9.44□□□□□ -0.9
SLF1-204ENST00000475916 RPLP1P05386 114 aaKnown RBP9.44□□□□□ -0.9
SLF1-204ENST00000475916 MZF1P28698 734 aaPredicted RBP9.44□□□□□ -0.9
SLF1-204ENST00000475916 TAGLNQ01995 201 aaKnown RBP9.44□□□□□ -0.9
SLF1-204ENST00000475916 DNM1Q05193 864 aaKnown RBP9.44□□□□□ -0.9
SLF1-204ENST00000475916 FMR1Q06787 632 aaKnown RBP eCLIP9.44□□□□□ -0.9
SLF1-204ENST00000475916 EHHADHQ08426 723 aa9.44□□□□□ -0.9
SLF1-204ENST00000475916 CBLBQ13191 982 aa9.44□□□□□ -0.9
SLF1-204ENST00000475916 DGKZQ13574 1117 aa9.44□□□□□ -0.9
SLF1-204ENST00000475916 SLC27A3Q5K4L6 730 aa9.44□□□□□ -0.9
SLF1-204ENST00000475916 PPARGC1BQ86YN6 1023 aaKnown RBP9.44□□□□□ -0.9
SLF1-204ENST00000475916 IFT43Q96FT9 208 aa9.44□□□□□ -0.9
SLF1-204ENST00000475916 WDR4P57081 412 aaKnown RBP9.43□□□□□ -0.9
SLF1-204ENST00000475916 RELBQ01201 579 aa9.43□□□□□ -0.9
SLF1-204ENST00000475916 C1orf53Q5VUE5 145 aa9.43□□□□□ -0.9
SLF1-204ENST00000475916 Q6ZVU0 165 aa9.43□□□□□ -0.9
SLF1-204ENST00000475916 ZNF598Q86UK7 904 aaKnown RBP9.43□□□□□ -0.9
SLF1-204ENST00000475916 RHBDD1Q8TEB9 315 aa9.43□□□□□ -0.9
SLF1-204ENST00000475916 LRFN2Q9ULH4 789 aa9.43□□□□□ -0.9
SLF1-204ENST00000475916 POTEAQ6S8J7 498 aa9.42□□□□□ -0.9
SLF1-204ENST00000475916 ALKBH8Q96BT7 664 aaKnown RBP9.42□□□□□ -0.9
SLF1-204ENST00000475916 FAM129BQ96TA1 746 aa9.42□□□□□ -0.9
SLF1-204ENST00000475916 PHACTR1Q9C0D0 580 aa9.42□□□□□ -0.9
SLF1-204ENST00000475916 HRH3Q9Y5N1 445 aa9.42□□□□□ -0.9
SLF1-204ENST00000475916 ZAP70P43403 619 aa9.41□□□□□ -0.9
SLF1-204ENST00000475916 NBPF1Q3BBV0 1214 aa9.41□□□□□ -0.9
SLF1-204ENST00000475916 ALG1LQ6GMV1 187 aa9.41□□□□□ -0.9
SLF1-204ENST00000475916 CYP4X1Q8N118 509 aa9.41□□□□□ -0.9
SLF1-204ENST00000475916 EDEM1Q92611 657 aa9.41□□□□□ -0.9
SLF1-204ENST00000475916 ITPKCQ96DU7 683 aa9.41□□□□□ -0.9
SLF1-204ENST00000475916 FHDC1Q9C0D6 1143 aaPredicted RBP9.41□□□□□ -0.9
SLF1-204ENST00000475916 POLIQ9UNA4 740 aa9.41□□□□□ -0.9
SLF1-204ENST00000475916 USP3Q9Y6I4 520 aa9.41□□□□□ -0.9
SLF1-204ENST00000475916 SCAMP3O14828 347 aaKnown RBP9.4□□□□□ -0.9
SLF1-204ENST00000475916 UPP2O95045 317 aa9.4□□□□□ -0.9
SLF1-204ENST00000475916 PSMD2Q13200 908 aa9.4□□□□□ -0.9
SLF1-204ENST00000475916 DSC3Q14574 896 aa9.4□□□□□ -0.9
SLF1-204ENST00000475916 IFFO2Q5TF58 517 aa9.4□□□□□ -0.9
SLF1-204ENST00000475916 AGBL1Q96MI9 1066 aa9.4□□□□□ -0.9
SLF1-204ENST00000475916 NIF3L1Q9GZT8 377 aa9.4□□□□□ -0.9
SLF1-204ENST00000475916 ZNF395Q9H8N7 513 aaPredicted RBP9.4□□□□□ -0.9
SLF1-204ENST00000475916 NEUROD4Q9HD90 331 aa9.4□□□□□ -0.9
SLF1-204ENST00000475916 PARP3Q9Y6F1 533 aa9.4□□□□□ -0.9
SLF1-204ENST00000475916 SORBS3O60504 671 aa9.39□□□□□ -0.91
SLF1-204ENST00000475916 GPC1P35052 558 aa9.39□□□□□ -0.91
SLF1-204ENST00000475916 ZC3H6P61129 1189 aaKnown RBP9.39□□□□□ -0.91
SLF1-204ENST00000475916 MMRN1Q13201 1228 aa9.39□□□□□ -0.91
SLF1-204ENST00000475916 ATCAYQ86WG3 371 aa9.39□□□□□ -0.91
SLF1-204ENST00000475916 AIDAQ96BJ3 306 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms