RNA–Protein interactions for RNA: ENST00000475869.2

NBPF3-208, Transcript of NBPF member 3, human

TSL 5

Gene NBPF3, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NBPF3-208	ENST00000475869	PARP3	Q9Y6F1	533 aa		32.84	■■■□□ 2.85
NBPF3-208	ENST00000475869	PXDNL	A1KZ92	1463 aa		32.84	■■■□□ 2.85
NBPF3-208	ENST00000475869	HTATSF1	O43719	755 aa	Known RBP	32.83	■■■□□ 2.85
NBPF3-208	ENST00000475869	STARD3NL	O95772	234 aa		32.83	■■■□□ 2.85
NBPF3-208	ENST00000475869	KCNQ3	O43525	872 aa		32.82	■■■□□ 2.84
NBPF3-208	ENST00000475869	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.82	■■■□□ 2.84
NBPF3-208	ENST00000475869	FMNL2	Q96PY5	1086 aa		32.82	■■■□□ 2.84
NBPF3-208	ENST00000475869	ZPR1	O75312	459 aa		32.81	■■■□□ 2.84
NBPF3-208	ENST00000475869	USPL1	Q5W0Q7	1092 aa		32.81	■■■□□ 2.84
NBPF3-208	ENST00000475869	PLEKHF1	Q96S99	279 aa		32.81	■■■□□ 2.84
NBPF3-208	ENST00000475869	TEX13A	Q9BXU3	409 aa	Predicted RBP	32.81	■■■□□ 2.84
NBPF3-208	ENST00000475869	DDR1	Q08345	913 aa		32.8	■■■□□ 2.84
NBPF3-208	ENST00000475869	DCTN1	Q14203	1278 aa		32.8	■■■□□ 2.84
NBPF3-208	ENST00000475869	NARF	Q9UHQ1	456 aa		32.8	■■■□□ 2.84
NBPF3-208	ENST00000475869	CANX	P27824	592 aa	Known RBP	32.79	■■■□□ 2.84
NBPF3-208	ENST00000475869	WWC3	Q9ULE0	1092 aa		32.79	■■■□□ 2.84
NBPF3-208	ENST00000475869	TGFB2	P61812	414 aa		32.78	■■■□□ 2.84
NBPF3-208	ENST00000475869	BRCA1	P38398	1863 aa	Known RBP	32.78	■■■□□ 2.84
NBPF3-208	ENST00000475869	NEFM	P07197	916 aa		32.77	■■■□□ 2.84
NBPF3-208	ENST00000475869	TM4SF1	P30408	202 aa		32.77	■■■□□ 2.84
NBPF3-208	ENST00000475869	EIF5	P55010	431 aa	Known RBP	32.76	■■■□□ 2.83
NBPF3-208	ENST00000475869	AFDN	P55196	1824 aa	Known RBP	32.75	■■■□□ 2.83
NBPF3-208	ENST00000475869	POLRMT	O00411	1230 aa	Known RBP	32.74	■■■□□ 2.83
NBPF3-208	ENST00000475869	BCL2L12	Q9HB09	334 aa		32.74	■■■□□ 2.83
NBPF3-208	ENST00000475869	SCN7A	Q01118	1682 aa		32.74	■■■□□ 2.83
NBPF3-208	ENST00000475869		A0A0G2JLW4	131 aa		32.73	■■■□□ 2.83
NBPF3-208	ENST00000475869	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.73	■■■□□ 2.83
NBPF3-208	ENST00000475869	NRXN2	Q9P2S2	1712 aa		32.72	■■■□□ 2.83
NBPF3-208	ENST00000475869	NFE2L2	Q16236	605 aa		32.72	■■■□□ 2.83
NBPF3-208	ENST00000475869	PNN	Q9H307	717 aa	Known RBP	32.72	■■■□□ 2.83
NBPF3-208	ENST00000475869	KDM3B	Q7LBC6	1761 aa		32.71	■■■□□ 2.83
NBPF3-208	ENST00000475869		A0A087WZG4	1122 aa		32.7	■■■□□ 2.83
NBPF3-208	ENST00000475869	A1BG	P04217	495 aa		32.7	■■■□□ 2.83
NBPF3-208	ENST00000475869	DPEP1	P16444	411 aa		32.7	■■■□□ 2.83
NBPF3-208	ENST00000475869	NFIX	Q14938	502 aa		32.7	■■■□□ 2.83
NBPF3-208	ENST00000475869	TAF7	Q15545	349 aa	Predicted RBP	32.7	■■■□□ 2.83
NBPF3-208	ENST00000475869	IL6ST	P40189	918 aa	Predicted RBP	32.69	■■■□□ 2.82
NBPF3-208	ENST00000475869	MAPK8IP3	Q9UPT6	1336 aa		32.69	■■■□□ 2.82
NBPF3-208	ENST00000475869	PRAMEF22	A3QJZ6	481 aa		32.68	■■■□□ 2.82
NBPF3-208	ENST00000475869	USP16	Q9Y5T5	823 aa		32.68	■■■□□ 2.82
NBPF3-208	ENST00000475869	SNRPA1	P09661	255 aa	Known RBP	32.66	■■■□□ 2.82
NBPF3-208	ENST00000475869	KCNA3	P22001	575 aa		32.66	■■■□□ 2.82
NBPF3-208	ENST00000475869	LAMB4	A4D0S4	1761 aa		32.65	■■■□□ 2.82
NBPF3-208	ENST00000475869	BCOR	Q6W2J9	1755 aa		32.65	■■■□□ 2.82
NBPF3-208	ENST00000475869	MIS18A	Q9NYP9	233 aa		32.65	■■■□□ 2.82
NBPF3-208	ENST00000475869	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.65	■■■□□ 2.82
NBPF3-208	ENST00000475869	ARFGEF1	Q9Y6D6	1849 aa		32.65	■■■□□ 2.82
NBPF3-208	ENST00000475869	THUMPD2	Q9BTF0	503 aa	Known RBP	32.63	■■■□□ 2.81
NBPF3-208	ENST00000475869	TBC1D2B	Q9UPU7	963 aa		32.63	■■■□□ 2.81
NBPF3-208	ENST00000475869	BCS1L	Q9Y276	419 aa		32.63	■■■□□ 2.81
NBPF3-208	ENST00000475869	SERPINB2	P05120	415 aa		32.61	■■■□□ 2.81
NBPF3-208	ENST00000475869	PNISR	Q8TF01	805 aa	Known RBP	32.61	■■■□□ 2.81
NBPF3-208	ENST00000475869	PIP4K2A	P48426	406 aa	Predicted RBP	32.6	■■■□□ 2.81
NBPF3-208	ENST00000475869	ADCY9	O60503	1353 aa		32.59	■■■□□ 2.81
NBPF3-208	ENST00000475869	DLEC1	Q9Y238	1755 aa		32.59	■■■□□ 2.81
NBPF3-208	ENST00000475869	CAMTA2	O94983	1202 aa		32.58	■■■□□ 2.81
NBPF3-208	ENST00000475869	CHRNA5	P30532	468 aa		32.58	■■■□□ 2.81
NBPF3-208	ENST00000475869	TBC1D9B	Q66K14	1250 aa		32.58	■■■□□ 2.81
NBPF3-208	ENST00000475869	BICDL1	Q6ZP65	573 aa		32.58	■■■□□ 2.81
NBPF3-208	ENST00000475869	NPM2	Q86SE8	214 aa	Known RBP	32.58	■■■□□ 2.81
NBPF3-208	ENST00000475869	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.58	■■■□□ 2.81
NBPF3-208	ENST00000475869	PIM2	Q9P1W9	311 aa		32.58	■■■□□ 2.81
NBPF3-208	ENST00000475869	ZEB1	P37275	1124 aa	Predicted RBP	32.57	■■■□□ 2.8
NBPF3-208	ENST00000475869	ATP10D	Q9P241	1426 aa		32.57	■■■□□ 2.8
NBPF3-208	ENST00000475869	NBPF26	B4DH59	902 aa		32.55	■■■□□ 2.8
NBPF3-208	ENST00000475869	RIPK4	P57078	832 aa		32.55	■■■□□ 2.8
NBPF3-208	ENST00000475869	NBPF10	Q6P3W6	841 aa	Known RBP	32.55	■■■□□ 2.8
NBPF3-208	ENST00000475869	DZIP3	Q86Y13	1208 aa	Known RBP	32.55	■■■□□ 2.8
NBPF3-208	ENST00000475869	NBPF15	Q8N660	670 aa		32.55	■■■□□ 2.8
NBPF3-208	ENST00000475869	CARMIL3	Q8ND23	1372 aa		32.55	■■■□□ 2.8
NBPF3-208	ENST00000475869	ANKRD31	Q8N7Z5	1873 aa		32.54	■■■□□ 2.8
NBPF3-208	ENST00000475869	TMPO	P42166	694 aa	Known RBP	32.53	■■■□□ 2.8
NBPF3-208	ENST00000475869	EIF4A1	P60842	406 aa	Known RBP	32.53	■■■□□ 2.8
NBPF3-208	ENST00000475869	DALRD3	Q5D0E6	543 aa	Known RBP	32.53	■■■□□ 2.8
NBPF3-208	ENST00000475869	GIGYF1	O75420	1035 aa	Predicted RBP	32.51	■■■□□ 2.79
NBPF3-208	ENST00000475869	WDR43	Q15061	677 aa	Known RBP eCLIP	32.51	■■■□□ 2.79
NBPF3-208	ENST00000475869	ARHGAP27	Q6ZUM4	889 aa		32.51	■■■□□ 2.79
NBPF3-208	ENST00000475869	CCDC146	Q8IYE0	955 aa		32.51	■■■□□ 2.79
NBPF3-208	ENST00000475869	LMOD3	Q0VAK6	560 aa		32.48	■■■□□ 2.79
NBPF3-208	ENST00000475869	PRR5L	Q6MZQ0	368 aa		32.47	■■■□□ 2.79
NBPF3-208	ENST00000475869	RUNDC1	Q96C34	613 aa		32.47	■■■□□ 2.79
NBPF3-208	ENST00000475869	SETDB2	Q96T68	719 aa		32.47	■■■□□ 2.79
NBPF3-208	ENST00000475869	ADAMTS8	Q9UP79	889 aa		32.47	■■■□□ 2.79
NBPF3-208	ENST00000475869	RRP7A	Q9Y3A4	280 aa	Known RBP	32.47	■■■□□ 2.79
NBPF3-208	ENST00000475869	COL11A2	P13942	1736 aa	Predicted RBP	32.46	■■■□□ 2.79
NBPF3-208	ENST00000475869	CLEC4G	Q6UXB4	293 aa		32.46	■■■□□ 2.79
NBPF3-208	ENST00000475869	C2CD5	Q86YS7	1000 aa		32.45	■■■□□ 2.79
NBPF3-208	ENST00000475869	TSPYL4	Q9UJ04	414 aa		32.45	■■■□□ 2.79
NBPF3-208	ENST00000475869	RGL2	O15211	777 aa		32.43	■■■□□ 2.78
NBPF3-208	ENST00000475869	BRIP1	Q9BX63	1249 aa		32.43	■■■□□ 2.78
NBPF3-208	ENST00000475869	BABAM1	Q9NWV8	329 aa		32.43	■■■□□ 2.78
NBPF3-208	ENST00000475869	ZNF652	Q9Y2D9	606 aa		32.43	■■■□□ 2.78
NBPF3-208	ENST00000475869	NEUROD2	Q15784	382 aa		32.42	■■■□□ 2.78
NBPF3-208	ENST00000475869	CCDC24	Q8N4L8	307 aa		32.42	■■■□□ 2.78
NBPF3-208	ENST00000475869		H0YIN7	160 aa		32.41	■■■□□ 2.78
NBPF3-208	ENST00000475869	CNBD1	Q8NA66	436 aa		32.41	■■■□□ 2.78
NBPF3-208	ENST00000475869	SBF1	O95248	1867 aa		32.41	■■■□□ 2.78
NBPF3-208	ENST00000475869	C1QTNF8	P60827	252 aa		32.4	■■■□□ 2.78
NBPF3-208	ENST00000475869	ZNF526	Q8TF50	670 aa	Predicted RBP	32.4	■■■□□ 2.78
NBPF3-208	ENST00000475869	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.4	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms