RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 CHMP4BQ9H444 224 aaKnown RBP15.58■□□□□ 0.08
MRPL55-227ENST00000475832 ZBTB7AO95365 584 aa15.57■□□□□ 0.08
MRPL55-227ENST00000475832 CCDC136Q96JN2 1154 aa15.57■□□□□ 0.08
MRPL55-227ENST00000475832 SYT17Q9BSW7 474 aa15.57■□□□□ 0.08
MRPL55-227ENST00000475832 ADAMTS7Q9UKP4 1686 aa15.57■□□□□ 0.08
MRPL55-227ENST00000475832 KRT24Q2M2I5 525 aa15.56■□□□□ 0.08
MRPL55-227ENST00000475832 HDGFL1Q5TGJ6 251 aa15.56■□□□□ 0.08
MRPL55-227ENST00000475832 ZNF790Q6PG37 636 aa15.56■□□□□ 0.08
MRPL55-227ENST00000475832 TMOD3Q9NYL9 352 aa15.56■□□□□ 0.08
MRPL55-227ENST00000475832 PTPRCP08575 1304 aa15.56■□□□□ 0.08
MRPL55-227ENST00000475832 MRC1P22897 1456 aa15.56■□□□□ 0.08
MRPL55-227ENST00000475832 CEP350Q5VT06 3117 aa15.56■□□□□ 0.08
MRPL55-227ENST00000475832 CHD4Q14839 1912 aa15.55■□□□□ 0.08
MRPL55-227ENST00000475832 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
MRPL55-227ENST00000475832 C20orf194Q5TEA3 1177 aa15.55■□□□□ 0.08
MRPL55-227ENST00000475832 ACSBG1Q96GR2 724 aa15.55■□□□□ 0.08
MRPL55-227ENST00000475832 FMNL2Q96PY5 1086 aa15.55■□□□□ 0.08
MRPL55-227ENST00000475832 FHDC1Q9C0D6 1143 aaPredicted RBP15.55■□□□□ 0.08
MRPL55-227ENST00000475832 PROM2Q8N271 834 aa15.54■□□□□ 0.08
MRPL55-227ENST00000475832 PANK1Q8TE04 598 aa15.54■□□□□ 0.08
MRPL55-227ENST00000475832 CLUAP1Q96AJ1 413 aa15.54■□□□□ 0.08
MRPL55-227ENST00000475832 ATF5Q9Y2D1 282 aaPredicted RBP15.54■□□□□ 0.08
MRPL55-227ENST00000475832 TCERG1O14776 1098 aaKnown RBP15.53■□□□□ 0.08
MRPL55-227ENST00000475832 TRIM27P14373 513 aa15.53■□□□□ 0.08
MRPL55-227ENST00000475832 DDX19BQ9UMR2 479 aa15.53■□□□□ 0.08
MRPL55-227ENST00000475832 COG6Q9Y2V7 657 aa15.53■□□□□ 0.08
MRPL55-227ENST00000475832 SCN11AQ9UI33 1791 aa15.52■□□□□ 0.08
MRPL55-227ENST00000475832 DOT1LQ8TEK3 1739 aa15.52■□□□□ 0.08
MRPL55-227ENST00000475832 EIF2S2P20042 333 aaKnown RBP15.52■□□□□ 0.08
MRPL55-227ENST00000475832 PTGER2P43116 358 aa15.52■□□□□ 0.08
MRPL55-227ENST00000475832 PRIM1P49642 420 aaKnown RBP15.52■□□□□ 0.08
MRPL55-227ENST00000475832 MVPQ14764 893 aaKnown RBP15.52■□□□□ 0.08
MRPL55-227ENST00000475832 BTAF1O14981 1849 aa15.52■□□□□ 0.07
MRPL55-227ENST00000475832 KDM3BQ7LBC6 1761 aa15.52■□□□□ 0.07
MRPL55-227ENST00000475832 KCNQ3O43525 872 aa15.51■□□□□ 0.07
MRPL55-227ENST00000475832 SNRPA1P09661 255 aaKnown RBP15.51■□□□□ 0.07
MRPL55-227ENST00000475832 SLC39A6Q13433 755 aa15.51■□□□□ 0.07
MRPL55-227ENST00000475832 ITPRIPQ8IWB1 547 aa15.51■□□□□ 0.07
MRPL55-227ENST00000475832 PDGFDQ9GZP0 370 aaPredicted RBP15.51■□□□□ 0.07
MRPL55-227ENST00000475832 DBF4Q9UBU7 674 aaPredicted RBP15.51■□□□□ 0.07
MRPL55-227ENST00000475832 GPR162Q16538 588 aa15.5■□□□□ 0.07
MRPL55-227ENST00000475832 HEG1Q9ULI3 1381 aa15.49■□□□□ 0.07
MRPL55-227ENST00000475832 TXNRD1Q16881 649 aa15.49■□□□□ 0.07
MRPL55-227ENST00000475832 B4GALNT3Q6L9W6 998 aa15.49■□□□□ 0.07
MRPL55-227ENST00000475832 NECTIN2Q92692 538 aa15.49■□□□□ 0.07
MRPL55-227ENST00000475832 ANO8Q9HCE9 1232 aaPredicted RBP15.49■□□□□ 0.07
MRPL55-227ENST00000475832 TOGARAM1Q9Y4F4 1720 aa15.48■□□□□ 0.07
MRPL55-227ENST00000475832 FKBP5Q13451 457 aaPredicted RBP15.48■□□□□ 0.07
MRPL55-227ENST00000475832 SYTL4Q96C24 671 aaPredicted RBP15.48■□□□□ 0.07
MRPL55-227ENST00000475832 HYPKQ9NX55 129 aa15.48■□□□□ 0.07
MRPL55-227ENST00000475832 SIPA1L3O60292 1781 aaPredicted RBP15.47■□□□□ 0.07
MRPL55-227ENST00000475832 RLBP1P12271 317 aa15.47■□□□□ 0.07
MRPL55-227ENST00000475832 FLIIQ13045 1269 aa15.47■□□□□ 0.07
MRPL55-227ENST00000475832 TMEM57Q8N5G2 664 aa15.47■□□□□ 0.07
MRPL55-227ENST00000475832 ZNF496Q96IT1 587 aaPredicted RBP15.47■□□□□ 0.07
MRPL55-227ENST00000475832 TEX13AQ9BXU3 409 aaPredicted RBP15.47■□□□□ 0.07
MRPL55-227ENST00000475832 KAT6BQ8WYB5 2073 aa15.47■□□□□ 0.07
MRPL55-227ENST00000475832 ABCC4O15439 1325 aa15.46■□□□□ 0.07
MRPL55-227ENST00000475832 DDX58O95786 925 aaKnown RBP15.46■□□□□ 0.07
MRPL55-227ENST00000475832 CCT4P50991 539 aaKnown RBP15.46■□□□□ 0.07
MRPL55-227ENST00000475832 CHPF2Q9P2E5 772 aa15.46■□□□□ 0.07
MRPL55-227ENST00000475832 SLC27A3Q5K4L6 730 aa15.45■□□□□ 0.06
MRPL55-227ENST00000475832 PIGBQ92521 554 aa15.45■□□□□ 0.06
MRPL55-227ENST00000475832 MTFR1LQ9H019 292 aa15.45■□□□□ 0.06
MRPL55-227ENST00000475832 DDX21Q9NR30 783 aaKnown RBP eCLIP15.45■□□□□ 0.06
MRPL55-227ENST00000475832 STK32BQ9NY57 414 aa15.45■□□□□ 0.06
MRPL55-227ENST00000475832 TNNQ9UQP3 1299 aa15.45■□□□□ 0.06
MRPL55-227ENST00000475832 PAPPAQ13219 1627 aa15.45■□□□□ 0.06
MRPL55-227ENST00000475832 LY75O60449 1722 aa15.45■□□□□ 0.06
MRPL55-227ENST00000475832 ERBB4Q15303 1308 aa15.44■□□□□ 0.06
MRPL55-227ENST00000475832 INTS3Q68E01 1043 aaKnown RBP15.44■□□□□ 0.06
MRPL55-227ENST00000475832 VSIG10Q8N0Z9 540 aa15.44■□□□□ 0.06
MRPL55-227ENST00000475832 LRRC4BQ9NT99 713 aa15.44■□□□□ 0.06
MRPL55-227ENST00000475832 ITGB4P16144 1822 aa15.44■□□□□ 0.06
MRPL55-227ENST00000475832 VIRMAQ69YN4 1812 aaKnown RBP15.44■□□□□ 0.06
MRPL55-227ENST00000475832 CASZ1Q86V15 1759 aa15.44■□□□□ 0.06
MRPL55-227ENST00000475832 PTCD1O75127 700 aaKnown RBP15.43■□□□□ 0.06
MRPL55-227ENST00000475832 G2E3Q7L622 706 aa15.43■□□□□ 0.06
MRPL55-227ENST00000475832 ARXQ96QS3 562 aa15.43■□□□□ 0.06
MRPL55-227ENST00000475832 SLC4A10Q6U841 1118 aa15.42■□□□□ 0.06
MRPL55-227ENST00000475832 SMARCC1Q92922 1105 aaPredicted RBP15.42■□□□□ 0.06
MRPL55-227ENST00000475832 RBM42Q9BTD8 480 aaKnown RBP15.42■□□□□ 0.06
MRPL55-227ENST00000475832 STARD3NLO95772 234 aa15.41■□□□□ 0.06
MRPL55-227ENST00000475832 HSPA6P17066 643 aa15.41■□□□□ 0.06
MRPL55-227ENST00000475832 CENPQQ7L2Z9 268 aaPredicted RBP15.41■□□□□ 0.06
MRPL55-227ENST00000475832 RWDD1Q9H446 243 aaPredicted RBP15.41■□□□□ 0.06
MRPL55-227ENST00000475832 ATG3Q9NT62 314 aa15.41■□□□□ 0.06
MRPL55-227ENST00000475832 SLC15A2Q16348 729 aa15.4■□□□□ 0.06
MRPL55-227ENST00000475832 PHAXQ9H814 394 aaKnown RBP15.4■□□□□ 0.06
MRPL55-227ENST00000475832 ASAP1Q9ULH1 1129 aa15.4■□□□□ 0.06
MRPL55-227ENST00000475832 PALLDQ8WX93 1383 aa15.39■□□□□ 0.05
MRPL55-227ENST00000475832 PRAMEF22A3QJZ6 481 aa15.39■□□□□ 0.05
MRPL55-227ENST00000475832 MYL6BP14649 208 aa15.39■□□□□ 0.05
MRPL55-227ENST00000475832 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
MRPL55-227ENST00000475832 AKT1S1Q96B36 256 aa15.39■□□□□ 0.05
MRPL55-227ENST00000475832 USP16Q9Y5T5 823 aa15.39■□□□□ 0.05
MRPL55-227ENST00000475832 PXDNLA1KZ92 1463 aa15.39■□□□□ 0.05
MRPL55-227ENST00000475832 KCPQ6ZWJ8 1503 aa15.38■□□□□ 0.05
MRPL55-227ENST00000475832 ZBTB7BO15156 539 aaPredicted RBP15.38■□□□□ 0.05
MRPL55-227ENST00000475832 KSR2Q6VAB6 950 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms