RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 NWD1Q149M9 1564 aa14.17□□□□□ -0.14
KCNIP3-206ENST00000475491 SURF6O75683 361 aaKnown RBP14.17□□□□□ -0.14
KCNIP3-206ENST00000475491 HSP90AA2PQ14568 343 aaPredicted RBP14.17□□□□□ -0.14
KCNIP3-206ENST00000475491 DNAAF4Q8WXU2 420 aa14.17□□□□□ -0.14
KCNIP3-206ENST00000475491 WDR17Q8IZU2 1322 aa14.17□□□□□ -0.14
KCNIP3-206ENST00000475491 RTL1A6NKG5 1358 aa14.17□□□□□ -0.14
KCNIP3-206ENST00000475491 DDRGK1Q96HY6 314 aa14.17□□□□□ -0.14
KCNIP3-206ENST00000475491 SRGAP3O43295 1099 aa14.17□□□□□ -0.14
KCNIP3-206ENST00000475491 USP44Q9H0E7 712 aa14.16□□□□□ -0.14
KCNIP3-206ENST00000475491 GNAI2P04899 355 aa14.16□□□□□ -0.14
KCNIP3-206ENST00000475491 PRIM1P49642 420 aaKnown RBP14.16□□□□□ -0.14
KCNIP3-206ENST00000475491 GPTP24298 496 aa14.16□□□□□ -0.14
KCNIP3-206ENST00000475491 TTLL7Q6ZT98 887 aa14.16□□□□□ -0.14
KCNIP3-206ENST00000475491 HTATSF1O43719 755 aaKnown RBP14.15□□□□□ -0.14
KCNIP3-206ENST00000475491 PPP1R42Q7Z4L9 355 aa14.15□□□□□ -0.14
KCNIP3-206ENST00000475491 ARHGAP45Q92619 1136 aa14.15□□□□□ -0.14
KCNIP3-206ENST00000475491 RILPL2Q969X0 211 aa14.15□□□□□ -0.14
KCNIP3-206ENST00000475491 TMOD3Q9NYL9 352 aa14.15□□□□□ -0.14
KCNIP3-206ENST00000475491 DBF4Q9UBU7 674 aaPredicted RBP14.15□□□□□ -0.14
KCNIP3-206ENST00000475491 INTS3Q68E01 1043 aaKnown RBP14.14□□□□□ -0.15
KCNIP3-206ENST00000475491 TRIM6-TRIM34B2RNG4 842 aa14.14□□□□□ -0.15
KCNIP3-206ENST00000475491 DCAF5Q96JK2 942 aa14.14□□□□□ -0.15
KCNIP3-206ENST00000475491 CAMTA1Q9Y6Y1 1673 aa14.14□□□□□ -0.15
KCNIP3-206ENST00000475491 TOM1O60784 492 aa14.13□□□□□ -0.15
KCNIP3-206ENST00000475491 EXOC5O00471 708 aa14.13□□□□□ -0.15
KCNIP3-206ENST00000475491 KCNQ2O43526 872 aa14.13□□□□□ -0.15
KCNIP3-206ENST00000475491 PTF1AQ7RTS3 328 aa14.13□□□□□ -0.15
KCNIP3-206ENST00000475491 DNAJC10Q8IXB1 793 aa14.13□□□□□ -0.15
KCNIP3-206ENST00000475491 FRAT2O75474 233 aaPredicted RBP14.13□□□□□ -0.15
KCNIP3-206ENST00000475491 CCT4P50991 539 aaKnown RBP14.13□□□□□ -0.15
KCNIP3-206ENST00000475491 MEX3CQ5U5Q3 659 aaKnown RBP14.13□□□□□ -0.15
KCNIP3-206ENST00000475491 HDAC1Q13547 482 aaPredicted RBP14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 NCBP3Q53F19 620 aaKnown RBP14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 UBE3BQ7Z3V4 1068 aa14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 SMC5Q8IY18 1101 aa14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 PTPRCP08575 1304 aa14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 KDM6AO15550 1401 aaPredicted RBP14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 DTNBO60941 627 aa14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 NUCB1Q02818 461 aa14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 PDE4CQ08493 712 aa14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 SYNE4Q8N205 404 aa14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 PIGBQ92521 554 aa14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 FMNL2Q96PY5 1086 aa14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 MARF1Q9Y4F3 1742 aaKnown RBP14.12□□□□□ -0.15
KCNIP3-206ENST00000475491 TBC1D2BQ9UPU7 963 aa14.11□□□□□ -0.15
KCNIP3-206ENST00000475491 NDUFB9Q9Y6M9 179 aa14.11□□□□□ -0.15
KCNIP3-206ENST00000475491 CEMIPQ8WUJ3 1361 aa14.11□□□□□ -0.15
KCNIP3-206ENST00000475491 NOL8Q76FK4 1167 aaKnown RBP14.11□□□□□ -0.15
KCNIP3-206ENST00000475491 ANKRD44Q8N8A2 993 aa14.11□□□□□ -0.15
KCNIP3-206ENST00000475491 SNRPA1P09661 255 aaKnown RBP14.1□□□□□ -0.15
KCNIP3-206ENST00000475491 KIF24Q5T7B8 1368 aa14.1□□□□□ -0.15
KCNIP3-206ENST00000475491 NFKBIBQ15653 356 aa14.1□□□□□ -0.15
KCNIP3-206ENST00000475491 CARD10Q9BWT7 1032 aa14.1□□□□□ -0.15
KCNIP3-206ENST00000475491 RGS12O14924 1447 aa14.1□□□□□ -0.15
KCNIP3-206ENST00000475491 HSP90AA1P07900 732 aaKnown RBP14.1□□□□□ -0.15
KCNIP3-206ENST00000475491 CCDC24Q8N4L8 307 aa14.09□□□□□ -0.15
KCNIP3-206ENST00000475491 C22orf23Q9BZE7 217 aa14.09□□□□□ -0.15
KCNIP3-206ENST00000475491 ANKRD13DQ6ZTN6 518 aa14.09□□□□□ -0.15
KCNIP3-206ENST00000475491 NBPF26B4DH59 902 aa14.09□□□□□ -0.15
KCNIP3-206ENST00000475491 BEND3Q5T5X7 828 aa14.09□□□□□ -0.15
KCNIP3-206ENST00000475491 NBPF14Q5TI25 921 aa14.09□□□□□ -0.15
KCNIP3-206ENST00000475491 NBPF10Q6P3W6 841 aaKnown RBP14.09□□□□□ -0.15
KCNIP3-206ENST00000475491 NBPF15Q8N660 670 aa14.09□□□□□ -0.15
KCNIP3-206ENST00000475491 GSE1Q14687 1217 aa14.08□□□□□ -0.16
KCNIP3-206ENST00000475491 PDIA6Q15084 440 aa14.08□□□□□ -0.16
KCNIP3-206ENST00000475491 DDB1Q16531 1140 aa14.08□□□□□ -0.16
KCNIP3-206ENST00000475491 EPHA10Q5JZY3 1008 aa14.08□□□□□ -0.16
KCNIP3-206ENST00000475491 SUCLG2Q96I99 432 aa14.08□□□□□ -0.16
KCNIP3-206ENST00000475491 CCDC8Q9H0W5 538 aaPredicted RBP14.08□□□□□ -0.16
KCNIP3-206ENST00000475491 SOS1Q07889 1333 aaPredicted RBP14.08□□□□□ -0.16
KCNIP3-206ENST00000475491 PCDH11XQ9BZA7 1347 aa14.08□□□□□ -0.16
KCNIP3-206ENST00000475491 PCDH11YQ9BZA8 1340 aa14.08□□□□□ -0.16
KCNIP3-206ENST00000475491 BICC1Q9H694 974 aaKnown RBP14.08□□□□□ -0.16
KCNIP3-206ENST00000475491 A0A087WZG4 1122 aa14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 HMMRO75330 724 aa14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 GNAI3P08754 354 aa14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 KSR2Q6VAB6 950 aa14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 BICDL1Q6ZP65 573 aa14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 GSPT1P15170 499 aaKnown RBP14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 NEXNQ0ZGT2 675 aa14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 PLEKHM2Q8IWE5 1019 aa14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 DDX21Q9NR30 783 aaKnown RBP eCLIP14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 RGPD1P0DJD0 1748 aa14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 ADCY9O60503 1353 aa14.07□□□□□ -0.16
KCNIP3-206ENST00000475491 DCTPP1Q9H773 170 aa14.06□□□□□ -0.16
KCNIP3-206ENST00000475491 IGKV5-2P06315 115 aa14.06□□□□□ -0.16
KCNIP3-206ENST00000475491 DCCP43146 1447 aa14.06□□□□□ -0.16
KCNIP3-206ENST00000475491 BRPF1P55201 1214 aaPredicted RBP14.06□□□□□ -0.16
KCNIP3-206ENST00000475491 ZNF594Q96JF6 807 aaPredicted RBP14.06□□□□□ -0.16
KCNIP3-206ENST00000475491 GZF1Q9H116 711 aaPredicted RBP14.06□□□□□ -0.16
KCNIP3-206ENST00000475491 BECN1Q14457 450 aa14.05□□□□□ -0.16
KCNIP3-206ENST00000475491 GCC1Q96CN9 775 aa14.05□□□□□ -0.16
KCNIP3-206ENST00000475491 DDX58O95786 925 aaKnown RBP14.05□□□□□ -0.16
KCNIP3-206ENST00000475491 RPAP2Q8IXW5 612 aaPredicted RBP14.05□□□□□ -0.16
KCNIP3-206ENST00000475491 CHMP4BQ9H444 224 aaKnown RBP14.05□□□□□ -0.16
KCNIP3-206ENST00000475491 COL5A2P05997 1499 aaPredicted RBP14.05□□□□□ -0.16
KCNIP3-206ENST00000475491 XIRP1Q702N8 1843 aaKnown RBP14.05□□□□□ -0.16
KCNIP3-206ENST00000475491 FAM89AQ96GI7 184 aa14.05□□□□□ -0.16
KCNIP3-206ENST00000475491 TBC1D2Q9BYX2 928 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms