RNA–Protein interactions for RNA: ENST00000475463.6

PCNX2-209, Transcript of pecanex 2, humanhuman

TSL 1 (best)

Gene PCNX2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-209ENST00000475463 NFKBIBQ15653 356 aa16.34■□□□□ 0.21
PCNX2-209ENST00000475463 SSH3Q8TE77 659 aa16.34■□□□□ 0.21
PCNX2-209ENST00000475463 NBPF7P0C2Y1 421 aaPredicted RBP16.34■□□□□ 0.21
PCNX2-209ENST00000475463 SDSP20132 328 aa16.34■□□□□ 0.21
PCNX2-209ENST00000475463 PDIA6Q15084 440 aa16.34■□□□□ 0.21
PCNX2-209ENST00000475463 TUBGCP6Q96RT7 1819 aa16.33■□□□□ 0.21
PCNX2-209ENST00000475463 PDE1AP54750 535 aa16.33■□□□□ 0.2
PCNX2-209ENST00000475463 POLA2Q14181 598 aa16.33■□□□□ 0.2
PCNX2-209ENST00000475463 DCAF5Q96JK2 942 aa16.33■□□□□ 0.2
PCNX2-209ENST00000475463 KIF2CQ99661 725 aa16.33■□□□□ 0.2
PCNX2-209ENST00000475463 LRRCC1Q9C099 1032 aa16.33■□□□□ 0.2
PCNX2-209ENST00000475463 ANTXR1Q9H6X2 564 aa16.33■□□□□ 0.2
PCNX2-209ENST00000475463 ABCA3Q99758 1704 aa16.33■□□□□ 0.2
PCNX2-209ENST00000475463 KSR2Q6VAB6 950 aa16.33■□□□□ 0.2
PCNX2-209ENST00000475463 DDX21Q9NR30 783 aaKnown RBP eCLIP16.33■□□□□ 0.2
PCNX2-209ENST00000475463 HYPKQ9NX55 129 aa16.33■□□□□ 0.2
PCNX2-209ENST00000475463 MAP3K2Q9Y2U5 619 aa16.33■□□□□ 0.2
PCNX2-209ENST00000475463 PPP1R42Q7Z4L9 355 aa16.32■□□□□ 0.2
PCNX2-209ENST00000475463 PRDM11Q9NQV5 511 aa16.31■□□□□ 0.2
PCNX2-209ENST00000475463 WDR17Q8IZU2 1322 aa16.31■□□□□ 0.2
PCNX2-209ENST00000475463 ALDH1L1O75891 902 aa16.3■□□□□ 0.2
PCNX2-209ENST00000475463 SLKQ9H2G2 1235 aaPredicted RBP16.3■□□□□ 0.2
PCNX2-209ENST00000475463 COL5A2P05997 1499 aaPredicted RBP16.3■□□□□ 0.2
PCNX2-209ENST00000475463 NHSL1Q5SYE7 1610 aa16.3■□□□□ 0.2
PCNX2-209ENST00000475463 PARP4Q9UKK3 1724 aaKnown RBP16.3■□□□□ 0.2
PCNX2-209ENST00000475463 ZNF496Q96IT1 587 aaPredicted RBP16.3■□□□□ 0.2
PCNX2-209ENST00000475463 HSP90AB1P08238 724 aaKnown RBP16.29■□□□□ 0.2
PCNX2-209ENST00000475463 SNX21Q969T3 373 aa16.29■□□□□ 0.2
PCNX2-209ENST00000475463 EIF5BO60841 1220 aaKnown RBP16.28■□□□□ 0.2
PCNX2-209ENST00000475463 STAP2Q9UGK3 403 aa16.28■□□□□ 0.2
PCNX2-209ENST00000475463 SRGAP3O43295 1099 aa16.27■□□□□ 0.2
PCNX2-209ENST00000475463 RAB11FIP3O75154 756 aa16.27■□□□□ 0.2
PCNX2-209ENST00000475463 MX1P20591 662 aa16.27■□□□□ 0.2
PCNX2-209ENST00000475463 TSHZ3Q63HK5 1081 aa16.27■□□□□ 0.2
PCNX2-209ENST00000475463 TOM1L2Q6ZVM7 507 aa16.27■□□□□ 0.2
PCNX2-209ENST00000475463 GLI3P10071 1580 aa16.27■□□□□ 0.19
PCNX2-209ENST00000475463 SURF6O75683 361 aaKnown RBP16.27■□□□□ 0.19
PCNX2-209ENST00000475463 MTX1Q13505 466 aa16.27■□□□□ 0.19
PCNX2-209ENST00000475463 CWF19L2Q2TBE0 894 aaKnown RBP16.27■□□□□ 0.19
PCNX2-209ENST00000475463 USP26Q9BXU7 913 aa16.27■□□□□ 0.19
PCNX2-209ENST00000475463 USP16Q9Y5T5 823 aa16.27■□□□□ 0.19
PCNX2-209ENST00000475463 FRAT2O75474 233 aaPredicted RBP16.26■□□□□ 0.19
PCNX2-209ENST00000475463 DDX58O95786 925 aaKnown RBP16.26■□□□□ 0.19
PCNX2-209ENST00000475463 CABP4P57796 275 aa16.26■□□□□ 0.19
PCNX2-209ENST00000475463 AIMP1Q12904 312 aaKnown RBP16.26■□□□□ 0.19
PCNX2-209ENST00000475463 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
PCNX2-209ENST00000475463 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
PCNX2-209ENST00000475463 LINS1Q8NG48 757 aa16.26■□□□□ 0.19
PCNX2-209ENST00000475463 SNRPA1P09661 255 aaKnown RBP16.26■□□□□ 0.19
PCNX2-209ENST00000475463 DEKP35659 375 aaKnown RBP16.26■□□□□ 0.19
PCNX2-209ENST00000475463 UTYO14607 1347 aa16.25■□□□□ 0.19
PCNX2-209ENST00000475463 TTC5Q8N0Z6 440 aa16.25■□□□□ 0.19
PCNX2-209ENST00000475463 SPRYD3Q8NCJ5 442 aa16.25■□□□□ 0.19
PCNX2-209ENST00000475463 ZCRB1Q8TBF4 217 aaKnown RBP16.25■□□□□ 0.19
PCNX2-209ENST00000475463 RHPN1Q8TCX5 695 aa16.25■□□□□ 0.19
PCNX2-209ENST00000475463 FMNL2Q96PY5 1086 aa16.25■□□□□ 0.19
PCNX2-209ENST00000475463 IL1RAPL2Q9NP60 686 aa16.25■□□□□ 0.19
PCNX2-209ENST00000475463 C9orf78Q9NZ63 289 aaPredicted RBP16.25■□□□□ 0.19
PCNX2-209ENST00000475463 SHANK3Q9BYB0 1731 aa16.25■□□□□ 0.19
PCNX2-209ENST00000475463 PCDH11XQ9BZA7 1347 aa16.25■□□□□ 0.19
PCNX2-209ENST00000475463 PCDH11YQ9BZA8 1340 aa16.25■□□□□ 0.19
PCNX2-209ENST00000475463 CARD10Q9BWT7 1032 aa16.24■□□□□ 0.19
PCNX2-209ENST00000475463 MYL6BP14649 208 aa16.24■□□□□ 0.19
PCNX2-209ENST00000475463 CASC1Q6TDU7 716 aa16.24■□□□□ 0.19
PCNX2-209ENST00000475463 XAGE3Q8WTP9 111 aa16.24■□□□□ 0.19
PCNX2-209ENST00000475463 RBM42Q9BTD8 480 aaKnown RBP16.24■□□□□ 0.19
PCNX2-209ENST00000475463 AOX1Q06278 1338 aa16.23■□□□□ 0.19
PCNX2-209ENST00000475463 CD2BP2O95400 341 aaKnown RBP16.23■□□□□ 0.19
PCNX2-209ENST00000475463 IGKV5-2P06315 115 aa16.23■□□□□ 0.19
PCNX2-209ENST00000475463 KAZALD1Q96I82 304 aa16.23■□□□□ 0.19
PCNX2-209ENST00000475463 LAMB4A4D0S4 1761 aa16.23■□□□□ 0.19
PCNX2-209ENST00000475463 GRM8O00222 908 aa16.23■□□□□ 0.19
PCNX2-209ENST00000475463 NKX1-1Q15270 411 aaPredicted RBP16.23■□□□□ 0.19
PCNX2-209ENST00000475463 LARP1Q6PKG0 1096 aaKnown RBP16.23■□□□□ 0.19
PCNX2-209ENST00000475463 COPS6Q7L5N1 327 aa16.23■□□□□ 0.19
PCNX2-209ENST00000475463 RIC3Q7Z5B4 369 aa16.23■□□□□ 0.19
PCNX2-209ENST00000475463 KIF1BPQ96EK5 621 aa16.23■□□□□ 0.19
PCNX2-209ENST00000475463 IL2RBP14784 551 aa16.22■□□□□ 0.19
PCNX2-209ENST00000475463 UBR2Q8IWV8 1755 aa16.22■□□□□ 0.19
PCNX2-209ENST00000475463 NUTM1Q86Y26 1132 aa16.21■□□□□ 0.19
PCNX2-209ENST00000475463 SUCLG2Q96I99 432 aa16.21■□□□□ 0.19
PCNX2-209ENST00000475463 ERVV-2B6SEH9 535 aa16.21■□□□□ 0.19
PCNX2-209ENST00000475463 ERC2O15083 957 aa16.21■□□□□ 0.19
PCNX2-209ENST00000475463 HSP90AB4PQ58FF6 505 aa16.21■□□□□ 0.19
PCNX2-209ENST00000475463 STRN4Q9NRL3 753 aa16.21■□□□□ 0.19
PCNX2-209ENST00000475463 HDAC5Q9UQL6 1122 aa16.21■□□□□ 0.19
PCNX2-209ENST00000475463 DDIT3P35638 169 aa16.2■□□□□ 0.18
PCNX2-209ENST00000475463 METTL22Q9BUU2 404 aaPredicted RBP16.2■□□□□ 0.18
PCNX2-209ENST00000475463 NEURL1BA8MQ27 555 aa16.2■□□□□ 0.18
PCNX2-209ENST00000475463 REC8O95072 547 aa16.2■□□□□ 0.18
PCNX2-209ENST00000475463 PIP4K2AP48426 406 aaPredicted RBP16.2■□□□□ 0.18
PCNX2-209ENST00000475463 UNC5CLQ8IV45 518 aa16.2■□□□□ 0.18
PCNX2-209ENST00000475463 PI4K2BQ8TCG2 481 aa16.2■□□□□ 0.18
PCNX2-209ENST00000475463 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
PCNX2-209ENST00000475463 ANKRD13DQ6ZTN6 518 aa16.19■□□□□ 0.18
PCNX2-209ENST00000475463 CHMLP26374 656 aa16.19■□□□□ 0.18
PCNX2-209ENST00000475463 EVA1CP58658 441 aa16.19■□□□□ 0.18
PCNX2-209ENST00000475463 GCKRQ14397 625 aa16.19■□□□□ 0.18
PCNX2-209ENST00000475463 MYD88Q99836 296 aa16.19■□□□□ 0.18
PCNX2-209ENST00000475463 BICC1Q9H694 974 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms