RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 LAMB1P07942 1786 aa5.04□□□□□ -1.6
USP16-205ENST00000474835 RIOK3O14730 519 aaKnown RBP5.03□□□□□ -1.6
USP16-205ENST00000474835 KDM4AO75164 1064 aa5.03□□□□□ -1.6
USP16-205ENST00000474835 VAMP4O75379 141 aa5.03□□□□□ -1.6
USP16-205ENST00000474835 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.03□□□□□ -1.6
USP16-205ENST00000474835 ZHX1Q9UKY1 873 aaPredicted RBP5.03□□□□□ -1.6
USP16-205ENST00000474835 SBNO1A3KN83 1393 aa5.03□□□□□ -1.6
USP16-205ENST00000474835 KDRP35968 1356 aa5.03□□□□□ -1.6
USP16-205ENST00000474835 PLA2G4AP47712 749 aa5.03□□□□□ -1.6
USP16-205ENST00000474835 CC2D1BQ5T0F9 858 aaKnown RBP5.03□□□□□ -1.6
USP16-205ENST00000474835 TMEM57Q8N5G2 664 aa5.03□□□□□ -1.6
USP16-205ENST00000474835 ZKSCAN2Q63HK3 967 aa5.03□□□□□ -1.6
USP16-205ENST00000474835 SCN7AQ01118 1682 aa5.03□□□□□ -1.6
USP16-205ENST00000474835 ADGRF5Q8IZF2 1346 aa5.03□□□□□ -1.6
USP16-205ENST00000474835 CARMIL3Q8ND23 1372 aa5.03□□□□□ -1.6
USP16-205ENST00000474835 AFDNP55196 1824 aaKnown RBP5.03□□□□□ -1.6
USP16-205ENST00000474835 MYH1P12882 1939 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 SMTNL1A8MU46 457 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 INHBEP58166 350 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 USP31Q70CQ4 1352 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 COL18A1P39060 1754 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 KIAA2012Q0VF49 1180 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 SUGP1Q8IWZ8 645 aaKnown RBP5.02□□□□□ -1.61
USP16-205ENST00000474835 ZGPATQ8N5A5 531 aaKnown RBP5.02□□□□□ -1.61
USP16-205ENST00000474835 TDRD7Q8NHU6 1098 aaKnown RBP5.02□□□□□ -1.61
USP16-205ENST00000474835 ATXN2Q99700 1313 aaKnown RBP5.02□□□□□ -1.61
USP16-205ENST00000474835 AKAP11Q9UKA4 1901 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 CCDC189A1A4V9 331 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 MBD3O95983 291 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 CCZ1BP86790 482 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 CCZ1P86791 482 aaPredicted RBP5.02□□□□□ -1.61
USP16-205ENST00000474835 CFAP44Q96MT7 982 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 RPGRIP1LQ68CZ1 1315 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 MST1RQ04912 1400 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 LAMB2P55268 1798 aa5.02□□□□□ -1.61
USP16-205ENST00000474835 ANKRD33BA6NCL7 494 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 MAP2K7O14733 419 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 ATP8B1O43520 1251 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 MFAP1P55081 439 aaKnown RBP5.01□□□□□ -1.61
USP16-205ENST00000474835 HSD3B7Q9H2F3 369 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 RBM27Q9P2N5 1060 aaKnown RBP5.01□□□□□ -1.61
USP16-205ENST00000474835 POLKQ9UBT6 870 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 NFAT5O94916 1531 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 A2ML1A8K2U0 1454 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 TMPOP42166 694 aaKnown RBP5.01□□□□□ -1.61
USP16-205ENST00000474835 IQCB1Q15051 598 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 HSCBQ8IWL3 235 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 FECHP22830 423 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 NBPF11Q86T75 865 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 PDCL2Q8N4E4 241 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 ANKRD44Q8N8A2 993 aa5.01□□□□□ -1.61
USP16-205ENST00000474835 ZBTB22O15209 634 aa5□□□□□ -1.61
USP16-205ENST00000474835 U2AF2P26368 475 aaKnown RBP eCLIP5□□□□□ -1.614e-8■■■■■ 30.7
USP16-205ENST00000474835 CNGB1Q14028 1251 aaPredicted RBP5□□□□□ -1.61
USP16-205ENST00000474835 IL25Q9H293 177 aa5□□□□□ -1.61
USP16-205ENST00000474835 KIF3AQ9Y496 699 aa5□□□□□ -1.61
USP16-205ENST00000474835 MX1P20591 662 aa5□□□□□ -1.61
USP16-205ENST00000474835 TMEM139Q8IV31 216 aa5□□□□□ -1.61
USP16-205ENST00000474835 TSC1Q92574 1164 aa5□□□□□ -1.61
USP16-205ENST00000474835 A1CFQ9NQ94 594 aaKnown RBP5□□□□□ -1.61
USP16-205ENST00000474835 PTPRUQ92729 1446 aa5□□□□□ -1.61
USP16-205ENST00000474835 GADD45BO75293 160 aaPredicted RBP5□□□□□ -1.61
USP16-205ENST00000474835 CDC45O75419 566 aa5□□□□□ -1.61
USP16-205ENST00000474835 ADD1P35611 737 aaKnown RBP5□□□□□ -1.61
USP16-205ENST00000474835 DNAJC2Q99543 621 aaKnown RBP5□□□□□ -1.61
USP16-205ENST00000474835 PAGR1Q9BTK6 254 aa5□□□□□ -1.61
USP16-205ENST00000474835 ARHGAP23Q9P227 1491 aa5□□□□□ -1.61
USP16-205ENST00000474835 TTC41PQ6P2S7 1318 aa4.99□□□□□ -1.61
USP16-205ENST00000474835 NCLP19338 710 aaKnown RBP4.99□□□□□ -1.61
USP16-205ENST00000474835 RSRC2Q7L4I2 434 aaKnown RBP4.99□□□□□ -1.61
USP16-205ENST00000474835 CCDC146Q8IYE0 955 aa4.99□□□□□ -1.61
USP16-205ENST00000474835 OSBPL5Q9H0X9 879 aaPredicted RBP4.99□□□□□ -1.61
USP16-205ENST00000474835 MRVI1Q9Y6F6 885 aa4.99□□□□□ -1.61
USP16-205ENST00000474835 HEG1Q9ULI3 1381 aa4.99□□□□□ -1.61
USP16-205ENST00000474835 TOGARAM1Q9Y4F4 1720 aa4.99□□□□□ -1.61
USP16-205ENST00000474835 USP5P45974 858 aa4.99□□□□□ -1.61
USP16-205ENST00000474835 EMC10Q5UCC4 262 aa4.99□□□□□ -1.61
USP16-205ENST00000474835 TRIM65Q6PJ69 517 aa4.99□□□□□ -1.61
USP16-205ENST00000474835 EDC4Q6P2E9 1401 aaKnown RBP4.99□□□□□ -1.61
USP16-205ENST00000474835 SPAG9O60271 1321 aaKnown RBP4.99□□□□□ -1.61
USP16-205ENST00000474835 C21orf2O43822 256 aa4.99□□□□□ -1.61
USP16-205ENST00000474835 TPM3P06753 285 aa4.99□□□□□ -1.61
USP16-205ENST00000474835 NOB1Q9ULX3 412 aaKnown RBP4.99□□□□□ -1.61
USP16-205ENST00000474835 COL15A1P39059 1388 aa4.99□□□□□ -1.61
USP16-205ENST00000474835 SALL1Q9NSC2 1324 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 SHOX2O60902 331 aaPredicted RBP4.98□□□□□ -1.61
USP16-205ENST00000474835 HSPA4P34932 840 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 ISM2Q6H9L7 571 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 GZF1Q9H116 711 aaPredicted RBP4.98□□□□□ -1.61
USP16-205ENST00000474835 PRDM10Q9NQV6 1147 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 FAM13BQ9NYF5 915 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 CGNQ9P2M7 1197 aaKnown RBP4.98□□□□□ -1.61
USP16-205ENST00000474835 ZNF142P52746 1687 aaPredicted RBP4.98□□□□□ -1.61
USP16-205ENST00000474835 CANXP27824 592 aaKnown RBP4.98□□□□□ -1.61
USP16-205ENST00000474835 HNRNPMP52272 730 aaKnown RBP eCLIP4.98□□□□□ -1.61
USP16-205ENST00000474835 RAD51AP2Q09MP3 1159 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 BPIFA3Q9BQP9 254 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 TSPY26PQ9H489 355 aa4.98□□□□□ -1.61
USP16-205ENST00000474835 CAVIN1Q6NZI2 390 aaKnown RBP4.98□□□□□ -1.61
USP16-205ENST00000474835 CEP85Q6P2H3 762 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms