RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 LMNB1P20700 586 aa17.09■□□□□ 0.33
TRIM13-207ENST00000474805 DNAJC10Q8IXB1 793 aa17.09■□□□□ 0.33
TRIM13-207ENST00000474805 TIAM2Q8IVF5 1701 aa17.09■□□□□ 0.33
TRIM13-207ENST00000474805 DLEC1Q9Y238 1755 aa17.09■□□□□ 0.33
TRIM13-207ENST00000474805 ZC3H4Q9UPT8 1303 aaKnown RBP17.08■□□□□ 0.32
TRIM13-207ENST00000474805 NFIXQ14938 502 aa17.07■□□□□ 0.32
TRIM13-207ENST00000474805 VIRMAQ69YN4 1812 aaKnown RBP17.07■□□□□ 0.32
TRIM13-207ENST00000474805 NRXN2Q9P2S2 1712 aa17.07■□□□□ 0.32
TRIM13-207ENST00000474805 SOS1Q07889 1333 aaPredicted RBP17.06■□□□□ 0.32
TRIM13-207ENST00000474805 POTECB2RU33 542 aa17.05■□□□□ 0.32
TRIM13-207ENST00000474805 SULT6B1Q6IMI4 303 aa17.05■□□□□ 0.32
TRIM13-207ENST00000474805 TTLL6Q8N841 843 aa17.05■□□□□ 0.32
TRIM13-207ENST00000474805 NARFQ9UHQ1 456 aa17.05■□□□□ 0.32
TRIM13-207ENST00000474805 SERPINB2P05120 415 aa17.04■□□□□ 0.32
TRIM13-207ENST00000474805 C2CD5Q86YS7 1000 aa17.04■□□□□ 0.32
TRIM13-207ENST00000474805 BCL2L12Q9HB09 334 aa17.04■□□□□ 0.32
TRIM13-207ENST00000474805 DICER1Q9UPY3 1922 aaKnown RBP17.04■□□□□ 0.32
TRIM13-207ENST00000474805 NFKBIEO00221 500 aa17.03■□□□□ 0.32
TRIM13-207ENST00000474805 CYP19A1P11511 503 aaPredicted RBP17.03■□□□□ 0.32
TRIM13-207ENST00000474805 SLC39A6Q13433 755 aa17.03■□□□□ 0.32
TRIM13-207ENST00000474805 LGR6Q9HBX8 967 aa17.03■□□□□ 0.32
TRIM13-207ENST00000474805 COL15A1P39059 1388 aa17.02■□□□□ 0.31
TRIM13-207ENST00000474805 H0YIN7 160 aa17.01■□□□□ 0.31
TRIM13-207ENST00000474805 DPY19L2Q6NUT2 758 aa17.01■□□□□ 0.31
TRIM13-207ENST00000474805 SLC52A2Q9HAB3 445 aa17.01■□□□□ 0.31
TRIM13-207ENST00000474805 ZBTB1Q9Y2K1 713 aa17.01■□□□□ 0.31
TRIM13-207ENST00000474805 CARMIL3Q8ND23 1372 aa17.01■□□□□ 0.31
TRIM13-207ENST00000474805 FER1L6Q2WGJ9 1857 aa17■□□□□ 0.31
TRIM13-207ENST00000474805 AKAP4Q5JQC9 854 aa17■□□□□ 0.31
TRIM13-207ENST00000474805 BICDL1Q6ZP65 573 aa17■□□□□ 0.31
TRIM13-207ENST00000474805 ANKRD31Q8N7Z5 1873 aa17■□□□□ 0.31
TRIM13-207ENST00000474805 PANK3Q9H999 370 aa17■□□□□ 0.31
TRIM13-207ENST00000474805 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
TRIM13-207ENST00000474805 MORC1Q86VD1 984 aa16.99■□□□□ 0.31
TRIM13-207ENST00000474805 MKRN1Q9UHC7 482 aaKnown RBP16.99■□□□□ 0.31
TRIM13-207ENST00000474805 CANXP27824 592 aaKnown RBP16.98■□□□□ 0.31
TRIM13-207ENST00000474805 IL13P35225 146 aa16.98■□□□□ 0.31
TRIM13-207ENST00000474805 ZNF622Q969S3 477 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRIM13-207ENST00000474805 CACNA1SQ13698 1873 aa16.98■□□□□ 0.31
TRIM13-207ENST00000474805 RNMTO43148 476 aaKnown RBP16.97■□□□□ 0.31
TRIM13-207ENST00000474805 C21orf2O43822 256 aa16.97■□□□□ 0.31
TRIM13-207ENST00000474805 ERFEQ4G0M1 354 aa16.97■□□□□ 0.31
TRIM13-207ENST00000474805 POTEIP0CG38 1075 aa16.96■□□□□ 0.31
TRIM13-207ENST00000474805 POTEJP0CG39 1038 aa16.96■□□□□ 0.31
TRIM13-207ENST00000474805 CHADLQ6NUI6 762 aa16.96■□□□□ 0.31
TRIM13-207ENST00000474805 CCDC24Q8N4L8 307 aa16.96■□□□□ 0.31
TRIM13-207ENST00000474805 CREBZFQ9NS37 354 aa16.96■□□□□ 0.31
TRIM13-207ENST00000474805 COL11A2P13942 1736 aaPredicted RBP16.96■□□□□ 0.3
TRIM13-207ENST00000474805 MRC1P22897 1456 aa16.94■□□□□ 0.3
TRIM13-207ENST00000474805 DDNO94850 711 aaPredicted RBP16.94■□□□□ 0.3
TRIM13-207ENST00000474805 TBC1D9BQ66K14 1250 aa16.94■□□□□ 0.3
TRIM13-207ENST00000474805 UBR2Q8IWV8 1755 aa16.94■□□□□ 0.3
TRIM13-207ENST00000474805 SLX4Q8IY92 1834 aa16.93■□□□□ 0.3
TRIM13-207ENST00000474805 FOXN1O15353 648 aa16.93■□□□□ 0.3
TRIM13-207ENST00000474805 HMOX1P09601 288 aa16.93■□□□□ 0.3
TRIM13-207ENST00000474805 PDE6BP35913 854 aa16.93■□□□□ 0.3
TRIM13-207ENST00000474805 EIF5P55010 431 aaKnown RBP16.93■□□□□ 0.3
TRIM13-207ENST00000474805 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
TRIM13-207ENST00000474805 BRIP1Q9BX63 1249 aa16.93■□□□□ 0.3
TRIM13-207ENST00000474805 A0A087WZG4 1122 aa16.91■□□□□ 0.3
TRIM13-207ENST00000474805 MTHFSDQ2M296 383 aaKnown RBP16.91■□□□□ 0.3
TRIM13-207ENST00000474805 PRR5LQ6MZQ0 368 aa16.91■□□□□ 0.3
TRIM13-207ENST00000474805 TAOK3Q9H2K8 898 aa16.91■□□□□ 0.3
TRIM13-207ENST00000474805 TBC1D2BQ9UPU7 963 aa16.91■□□□□ 0.3
TRIM13-207ENST00000474805 STARD3NLO95772 234 aa16.9■□□□□ 0.3
TRIM13-207ENST00000474805 PDZRN3Q9UPQ7 1066 aa16.9■□□□□ 0.3
TRIM13-207ENST00000474805 ZNF330Q9Y3S2 320 aaPredicted RBP16.9■□□□□ 0.3
TRIM13-207ENST00000474805 CNTNAP1P78357 1384 aa16.89■□□□□ 0.3
TRIM13-207ENST00000474805 SCN7AQ01118 1682 aa16.89■□□□□ 0.29
TRIM13-207ENST00000474805 LTBP3Q9NS15 1303 aa16.89■□□□□ 0.29
TRIM13-207ENST00000474805 SCN4AP35499 1836 aa16.89■□□□□ 0.29
TRIM13-207ENST00000474805 TTC5Q8N0Z6 440 aa16.88■□□□□ 0.29
TRIM13-207ENST00000474805 PRDM10Q9NQV6 1147 aa16.88■□□□□ 0.29
TRIM13-207ENST00000474805 PASKQ96RG2 1323 aa16.88■□□□□ 0.29
TRIM13-207ENST00000474805 ARFGEF2Q9Y6D5 1785 aa16.87■□□□□ 0.29
TRIM13-207ENST00000474805 HSPA5P11021 654 aaKnown RBP16.87■□□□□ 0.29
TRIM13-207ENST00000474805 VEGFBP49765 207 aa16.87■□□□□ 0.29
TRIM13-207ENST00000474805 CNKSR1Q969H4 720 aa16.87■□□□□ 0.29
TRIM13-207ENST00000474805 ZNF496Q96IT1 587 aaPredicted RBP16.87■□□□□ 0.29
TRIM13-207ENST00000474805 TIMELESSQ9UNS1 1208 aa16.87■□□□□ 0.29
TRIM13-207ENST00000474805 KNSTRNQ9Y448 316 aa16.87■□□□□ 0.29
TRIM13-207ENST00000474805 CTCFP49711 727 aaPredicted RBP16.86■□□□□ 0.29
TRIM13-207ENST00000474805 STYK1Q6J9G0 422 aa16.86■□□□□ 0.29
TRIM13-207ENST00000474805 PRPF40BQ6NWY9 871 aaKnown RBP16.86■□□□□ 0.29
TRIM13-207ENST00000474805 LDHDQ86WU2 507 aa16.86■□□□□ 0.29
TRIM13-207ENST00000474805 AIDAQ96BJ3 306 aa16.86■□□□□ 0.29
TRIM13-207ENST00000474805 SETDB2Q96T68 719 aa16.86■□□□□ 0.29
TRIM13-207ENST00000474805 IQCA1LA6NCM1 817 aa16.85■□□□□ 0.29
TRIM13-207ENST00000474805 NPHP1O15259 732 aa16.85■□□□□ 0.29
TRIM13-207ENST00000474805 SRGNP10124 158 aa16.85■□□□□ 0.29
TRIM13-207ENST00000474805 EIF4G2P78344 907 aaKnown RBP eCLIP16.85■□□□□ 0.29
TRIM13-207ENST00000474805 CNBD1Q8NA66 436 aa16.85■□□□□ 0.29
TRIM13-207ENST00000474805 TAF1DQ9H5J8 278 aaPredicted RBP16.85■□□□□ 0.29
TRIM13-207ENST00000474805 TMEM88BA6NKF7 163 aa16.84■□□□□ 0.29
TRIM13-207ENST00000474805 ITGBL1O95965 494 aaPredicted RBP16.84■□□□□ 0.29
TRIM13-207ENST00000474805 A1BGP04217 495 aa16.84■□□□□ 0.29
TRIM13-207ENST00000474805 IL6STP40189 918 aaPredicted RBP16.84■□□□□ 0.29
TRIM13-207ENST00000474805 LBX1P52954 281 aa16.84■□□□□ 0.29
TRIM13-207ENST00000474805 EAPPQ56P03 285 aaPredicted RBP16.84■□□□□ 0.29
TRIM13-207ENST00000474805 MASTLQ96GX5 879 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms