RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 SOS1Q07889 1333 aaPredicted RBP18.64■□□□□ 0.57
EPCAM-205ENST00000474691 COL15A1P39059 1388 aa18.64■□□□□ 0.57
EPCAM-205ENST00000474691 MYH14Q7Z406 1995 aaKnown RBP18.64■□□□□ 0.57
EPCAM-205ENST00000474691 A0A087WZG4 1122 aa18.63■□□□□ 0.57
EPCAM-205ENST00000474691 H0YIN7 160 aa18.63■□□□□ 0.57
EPCAM-205ENST00000474691 SERPINB2P05120 415 aa18.63■□□□□ 0.57
EPCAM-205ENST00000474691 CNGB1Q14028 1251 aaPredicted RBP18.63■□□□□ 0.57
EPCAM-205ENST00000474691 NFIXQ14938 502 aa18.63■□□□□ 0.57
EPCAM-205ENST00000474691 CC2D1BQ5T0F9 858 aaKnown RBP18.63■□□□□ 0.57
EPCAM-205ENST00000474691 BICDL1Q6ZP65 573 aa18.63■□□□□ 0.57
EPCAM-205ENST00000474691 VSIG10Q8N0Z9 540 aa18.63■□□□□ 0.57
EPCAM-205ENST00000474691 ZNF330Q9Y3S2 320 aaPredicted RBP18.63■□□□□ 0.57
EPCAM-205ENST00000474691 KIAA1551Q9HCM1 1747 aa18.63■□□□□ 0.57
EPCAM-205ENST00000474691 U2SURPO15042 1029 aaKnown RBP18.62■□□□□ 0.57
EPCAM-205ENST00000474691 TEFQ10587 303 aa18.62■□□□□ 0.57
EPCAM-205ENST00000474691 MTHFSDQ2M296 383 aaKnown RBP18.62■□□□□ 0.57
EPCAM-205ENST00000474691 TTLL6Q8N841 843 aa18.62■□□□□ 0.57
EPCAM-205ENST00000474691 ZBTB1Q9Y2K1 713 aa18.62■□□□□ 0.57
EPCAM-205ENST00000474691 KCPQ6ZWJ8 1503 aa18.61■□□□□ 0.57
EPCAM-205ENST00000474691 AMER1Q5JTC6 1135 aaPredicted RBP18.61■□□□□ 0.57
EPCAM-205ENST00000474691 C2CD5Q86YS7 1000 aa18.61■□□□□ 0.57
EPCAM-205ENST00000474691 SMC1BQ8NDV3 1235 aa18.61■□□□□ 0.57
EPCAM-205ENST00000474691 LMNB1P20700 586 aa18.6■□□□□ 0.57
EPCAM-205ENST00000474691 RASSF7Q02833 373 aa18.6■□□□□ 0.57
EPCAM-205ENST00000474691 TEX13AQ9BXU3 409 aaPredicted RBP18.6■□□□□ 0.57
EPCAM-205ENST00000474691 ZC3H4Q9UPT8 1303 aaKnown RBP18.59■□□□□ 0.57
EPCAM-205ENST00000474691 ARFGEF1Q9Y6D6 1849 aa18.59■□□□□ 0.57
EPCAM-205ENST00000474691 SCN11AQ9UI33 1791 aa18.59■□□□□ 0.57
EPCAM-205ENST00000474691 CEP350Q5VT06 3117 aa18.58■□□□□ 0.57
EPCAM-205ENST00000474691 TJP1Q07157 1748 aa18.58■□□□□ 0.57
EPCAM-205ENST00000474691 DPY19L2Q6NUT2 758 aa18.58■□□□□ 0.56
EPCAM-205ENST00000474691 DNAJC5GQ8N7S2 189 aa18.58■□□□□ 0.56
EPCAM-205ENST00000474691 GAS2L2Q8NHY3 880 aa18.58■□□□□ 0.56
EPCAM-205ENST00000474691 ZNF622Q969S3 477 aaKnown RBP eCLIP18.58■□□□□ 0.56
EPCAM-205ENST00000474691 KLRG1Q96E93 195 aa18.58■□□□□ 0.56
EPCAM-205ENST00000474691 KIF7Q2M1P5 1343 aa18.57■□□□□ 0.56
EPCAM-205ENST00000474691 GNAT3A8MTJ3 354 aa18.57■□□□□ 0.56
EPCAM-205ENST00000474691 PDZRN3Q9UPQ7 1066 aa18.57■□□□□ 0.56
EPCAM-205ENST00000474691 BRCA1P38398 1863 aaKnown RBP18.56■□□□□ 0.56
EPCAM-205ENST00000474691 VEGFAP15692 232 aaPredicted RBP18.56■□□□□ 0.56
EPCAM-205ENST00000474691 PDE6BP35913 854 aa18.56■□□□□ 0.56
EPCAM-205ENST00000474691 GLTPD2A6NH11 291 aa18.55■□□□□ 0.56
EPCAM-205ENST00000474691 HTRA3P83110 453 aa18.55■□□□□ 0.56
EPCAM-205ENST00000474691 CFAP53Q96M91 514 aa18.54■□□□□ 0.56
EPCAM-205ENST00000474691 ZNF219Q9P2Y4 722 aaPredicted RBP18.54■□□□□ 0.56
EPCAM-205ENST00000474691 MRC1P22897 1456 aa18.53■□□□□ 0.56
EPCAM-205ENST00000474691 ZNF790Q6PG37 636 aa18.53■□□□□ 0.56
EPCAM-205ENST00000474691 FMNL2Q96PY5 1086 aa18.53■□□□□ 0.56
EPCAM-205ENST00000474691 BCL2L12Q9HB09 334 aa18.53■□□□□ 0.56
EPCAM-205ENST00000474691 TBC1D2BQ9UPU7 963 aa18.53■□□□□ 0.56
EPCAM-205ENST00000474691 EIF5P55010 431 aaKnown RBP18.52■□□□□ 0.56
EPCAM-205ENST00000474691 ST5P78524 1137 aa18.52■□□□□ 0.56
EPCAM-205ENST00000474691 TBC1D9BQ66K14 1250 aa18.52■□□□□ 0.56
EPCAM-205ENST00000474691 ZNF496Q96IT1 587 aaPredicted RBP18.52■□□□□ 0.56
EPCAM-205ENST00000474691 SETDB2Q96T68 719 aa18.52■□□□□ 0.56
EPCAM-205ENST00000474691 IL6STP40189 918 aaPredicted RBP18.51■□□□□ 0.55
EPCAM-205ENST00000474691 BRIP1Q9BX63 1249 aa18.51■□□□□ 0.55
EPCAM-205ENST00000474691 NUDCQ9Y266 331 aa18.51■□□□□ 0.55
EPCAM-205ENST00000474691 HEG1Q9ULI3 1381 aa18.51■□□□□ 0.55
EPCAM-205ENST00000474691 WDR90Q96KV7 1748 aa18.51■□□□□ 0.55
EPCAM-205ENST00000474691 BTBD11A6QL63 1104 aa18.5■□□□□ 0.55
EPCAM-205ENST00000474691 C21orf2O43822 256 aa18.5■□□□□ 0.55
EPCAM-205ENST00000474691 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
EPCAM-205ENST00000474691 ERFEQ4G0M1 354 aa18.5■□□□□ 0.55
EPCAM-205ENST00000474691 CNBD1Q8NA66 436 aa18.5■□□□□ 0.55
EPCAM-205ENST00000474691 CARMIL3Q8ND23 1372 aa18.5■□□□□ 0.55
EPCAM-205ENST00000474691 TNRC6CQ9HCJ0 1690 aaKnown RBP18.5■□□□□ 0.55
EPCAM-205ENST00000474691 RTF1Q92541 710 aaKnown RBP18.49■□□□□ 0.55
EPCAM-205ENST00000474691 CNKSR1Q969H4 720 aa18.49■□□□□ 0.55
EPCAM-205ENST00000474691 PER1O15534 1290 aaPredicted RBP18.48■□□□□ 0.55
EPCAM-205ENST00000474691 SOGA3Q5TF21 947 aa18.48■□□□□ 0.55
EPCAM-205ENST00000474691 CCDC24Q8N4L8 307 aa18.48■□□□□ 0.55
EPCAM-205ENST00000474691 JMYQ8N9B5 988 aa18.48■□□□□ 0.55
EPCAM-205ENST00000474691 IL17REQ8NFR9 667 aa18.48■□□□□ 0.55
EPCAM-205ENST00000474691 PRR5LQ6MZQ0 368 aa18.47■□□□□ 0.55
EPCAM-205ENST00000474691 DZIP3Q86Y13 1208 aaKnown RBP18.47■□□□□ 0.55
EPCAM-205ENST00000474691 TAOK3Q9H2K8 898 aa18.47■□□□□ 0.55
EPCAM-205ENST00000474691 ZNF652Q9Y2D9 606 aa18.47■□□□□ 0.55
EPCAM-205ENST00000474691 ADAMTS7Q9UKP4 1686 aa18.47■□□□□ 0.55
EPCAM-205ENST00000474691 AFDNP55196 1824 aaKnown RBP18.46■□□□□ 0.55
EPCAM-205ENST00000474691 NFKBIEO00221 500 aa18.46■□□□□ 0.55
EPCAM-205ENST00000474691 A1BGP04217 495 aa18.46■□□□□ 0.55
EPCAM-205ENST00000474691 SBF1O95248 1867 aa18.46■□□□□ 0.54
EPCAM-205ENST00000474691 PRKAR2BP31323 418 aa18.45■□□□□ 0.54
EPCAM-205ENST00000474691 NBPF5PQ86XG9 351 aaPredicted RBP18.45■□□□□ 0.54
EPCAM-205ENST00000474691 TNS4Q8IZW8 715 aa18.45■□□□□ 0.54
EPCAM-205ENST00000474691 NEFMP07197 916 aa18.44■□□□□ 0.54
EPCAM-205ENST00000474691 MASTLQ96GX5 879 aa18.44■□□□□ 0.54
EPCAM-205ENST00000474691 NRXN2Q9P2S2 1712 aa18.43■□□□□ 0.54
EPCAM-205ENST00000474691 CAPN15O75808 1086 aa18.43■□□□□ 0.54
EPCAM-205ENST00000474691 COL13A1Q5TAT6 717 aaPredicted RBP18.43■□□□□ 0.54
EPCAM-205ENST00000474691 STYK1Q6J9G0 422 aa18.43■□□□□ 0.54
EPCAM-205ENST00000474691 NPC1L1Q9UHC9 1359 aa18.42■□□□□ 0.54
EPCAM-205ENST00000474691 VIRMAQ69YN4 1812 aaKnown RBP18.42■□□□□ 0.54
EPCAM-205ENST00000474691 CAMTA2O94983 1202 aa18.42■□□□□ 0.54
EPCAM-205ENST00000474691 SNRPA1P09661 255 aaKnown RBP18.42■□□□□ 0.54
EPCAM-205ENST00000474691 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
EPCAM-205ENST00000474691 GTF2E1P29083 439 aaPredicted RBP18.42■□□□□ 0.54
EPCAM-205ENST00000474691 PRELPP51888 382 aa18.42■□□□□ 0.54
EPCAM-205ENST00000474691 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms